RNA–Protein interactions for RNA: ENST00000474838.1

ITGB5-205, Transcript of integrin subunit beta 5, humanhuman

TSL 3

Gene ITGB5, Length 475 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-205ENST00000474838 FAM196AQ6ZSG2 479 aa22.81■■□□□ 1.24
ITGB5-205ENST00000474838 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.81■■□□□ 1.24
ITGB5-205ENST00000474838 SLC12A5Q9H2X9 1139 aa22.81■■□□□ 1.24
ITGB5-205ENST00000474838 TERF2IPQ9NYB0 399 aa22.81■■□□□ 1.24
ITGB5-205ENST00000474838 SOX12O15370 315 aa22.8■■□□□ 1.24
ITGB5-205ENST00000474838 PDE3BQ13370 1112 aa22.8■■□□□ 1.24
ITGB5-205ENST00000474838 WDR17Q8IZU2 1322 aa22.8■■□□□ 1.24
ITGB5-205ENST00000474838 AXIN2Q9Y2T1 843 aa22.79■■□□□ 1.24
ITGB5-205ENST00000474838 USP47Q96K76 1375 aa22.78■■□□□ 1.24
ITGB5-205ENST00000474838 NME9Q86XW9 330 aa22.78■■□□□ 1.24
ITGB5-205ENST00000474838 LRRC37A3O60309 1634 aa22.78■■□□□ 1.24
ITGB5-205ENST00000474838 CLSPNQ9HAW4 1339 aa22.78■■□□□ 1.24
ITGB5-205ENST00000474838 TOM1L2Q6ZVM7 507 aa22.77■■□□□ 1.24
ITGB5-205ENST00000474838 WNK3Q9BYP7 1800 aa22.77■■□□□ 1.24
ITGB5-205ENST00000474838 TIMELESSQ9UNS1 1208 aa22.75■■□□□ 1.23
ITGB5-205ENST00000474838 OVOS2A0A0J9YW53 1432 aa22.74■■□□□ 1.23
ITGB5-205ENST00000474838 OVOS2Q6IE36 1432 aa22.74■■□□□ 1.23
ITGB5-205ENST00000474838 RGPD5Q99666 1765 aa22.74■■□□□ 1.23
ITGB5-205ENST00000474838 TRIM37O94972 964 aa22.74■■□□□ 1.23
ITGB5-205ENST00000474838 EN1Q05925 392 aaPredicted RBP22.74■■□□□ 1.23
ITGB5-205ENST00000474838 OVOS2A0A0G2JMS6 1433 aa22.73■■□□□ 1.23
ITGB5-205ENST00000474838 C11orf95C9JLR9 678 aaPredicted RBP22.72■■□□□ 1.23
ITGB5-205ENST00000474838 PEAK1Q9H792 1746 aa22.71■■□□□ 1.23
ITGB5-205ENST00000474838 LTN1O94822 1766 aa22.71■■□□□ 1.23
ITGB5-205ENST00000474838 CSB-PGBD3P0DP91 1061 aa22.71■■□□□ 1.23
ITGB5-205ENST00000474838 CDCA7Q9BWT1 371 aaPredicted RBP22.71■■□□□ 1.23
ITGB5-205ENST00000474838 CARD10Q9BWT7 1032 aa22.71■■□□□ 1.23
ITGB5-205ENST00000474838 PARD3Q8TEW0 1356 aa22.71■■□□□ 1.23
ITGB5-205ENST00000474838 TMF1P82094 1093 aa22.7■■□□□ 1.22
ITGB5-205ENST00000474838 ANKRD36BQ8N2N9 1353 aa22.7■■□□□ 1.22
ITGB5-205ENST00000474838 CCDC7Q96M83 1385 aa22.69■■□□□ 1.22
ITGB5-205ENST00000474838 DDB1Q16531 1140 aa22.69■■□□□ 1.22
ITGB5-205ENST00000474838 PCGF6Q9BYE7 350 aa22.69■■□□□ 1.22
ITGB5-205ENST00000474838 ERBB3P21860 1342 aa22.68■■□□□ 1.22
ITGB5-205ENST00000474838 APBA3O96018 575 aa22.68■■□□□ 1.22
ITGB5-205ENST00000474838 CAMKK2Q96RR4 588 aa22.68■■□□□ 1.22
ITGB5-205ENST00000474838 EZH2Q15910 746 aaKnown RBP22.67■■□□□ 1.22
ITGB5-205ENST00000474838 SRCAPQ6ZRS2 3230 aa22.67■■□□□ 1.22
ITGB5-205ENST00000474838 RREB1Q92766 1687 aa22.66■■□□□ 1.22
ITGB5-205ENST00000474838 LRP5O75197 1615 aa22.64■■□□□ 1.22
ITGB5-205ENST00000474838 CDCA8Q53HL2 280 aa22.64■■□□□ 1.21
ITGB5-205ENST00000474838 BCL9O00512 1426 aa22.64■■□□□ 1.21
ITGB5-205ENST00000474838 PSDA5PKW4 1024 aaPredicted RBP22.63■■□□□ 1.21
ITGB5-205ENST00000474838 TNS2Q63HR2 1409 aa22.63■■□□□ 1.21
ITGB5-205ENST00000474838 COG3Q96JB2 828 aa22.62■■□□□ 1.21
ITGB5-205ENST00000474838 RGPD3A6NKT7 1758 aaPredicted RBP22.61■■□□□ 1.21
ITGB5-205ENST00000474838 RGPD4Q7Z3J3 1758 aa22.61■■□□□ 1.21
ITGB5-205ENST00000474838 NUP188Q5SRE5 1749 aa22.61■■□□□ 1.21
ITGB5-205ENST00000474838 ANKRD24Q8TF21 1146 aa22.61■■□□□ 1.21
ITGB5-205ENST00000474838 SBF2Q86WG5 1849 aa22.61■■□□□ 1.21
ITGB5-205ENST00000474838 MARCH10Q8NA82 808 aaPredicted RBP22.6■■□□□ 1.21
ITGB5-205ENST00000474838 NLRP2Q9NX02 1062 aa22.6■■□□□ 1.21
ITGB5-205ENST00000474838 MYOM1P52179 1685 aa22.59■■□□□ 1.21
ITGB5-205ENST00000474838 FAM208AQ9UK61 1670 aaKnown RBP22.59■■□□□ 1.21
ITGB5-205ENST00000474838 R3HDM1Q15032 1099 aaKnown RBP22.58■■□□□ 1.21
ITGB5-205ENST00000474838 IP6K1Q92551 441 aa22.58■■□□□ 1.21
ITGB5-205ENST00000474838 EXOC5O00471 708 aa22.57■■□□□ 1.2
ITGB5-205ENST00000474838 BCL11BQ9C0K0 894 aaPredicted RBP22.56■■□□□ 1.2
ITGB5-205ENST00000474838 MAP3K19Q56UN5 1328 aa22.56■■□□□ 1.2
ITGB5-205ENST00000474838 RTL1A6NKG5 1358 aa22.55■■□□□ 1.2
ITGB5-205ENST00000474838 IL2RBP14784 551 aa22.55■■□□□ 1.2
ITGB5-205ENST00000474838 KIF20BQ96Q89 1820 aa22.54■■□□□ 1.2
ITGB5-205ENST00000474838 FYB1O15117 783 aa22.54■■□□□ 1.2
ITGB5-205ENST00000474838 PLSCR1O15162 318 aa22.52■■□□□ 1.2
ITGB5-205ENST00000474838 HOXC9P31274 260 aa22.52■■□□□ 1.2
ITGB5-205ENST00000474838 CCER1Q8TC90 406 aaPredicted RBP22.52■■□□□ 1.2
ITGB5-205ENST00000474838 GGNBP2Q9H3C7 697 aa22.52■■□□□ 1.2
ITGB5-205ENST00000474838 AMPHP49418 695 aa22.51■■□□□ 1.19
ITGB5-205ENST00000474838 NBPF14Q5TI25 921 aa22.51■■□□□ 1.19
ITGB5-205ENST00000474838 PTF1AQ7RTS3 328 aa22.51■■□□□ 1.19
ITGB5-205ENST00000474838 NHSQ6T4R5 1651 aa22.51■■□□□ 1.19
ITGB5-205ENST00000474838 NSD3Q9BZ95 1437 aa22.49■■□□□ 1.19
ITGB5-205ENST00000474838 FBLN1P23142 703 aa22.49■■□□□ 1.19
ITGB5-205ENST00000474838 LTV1Q96GA3 475 aaPredicted RBP22.49■■□□□ 1.19
ITGB5-205ENST00000474838 RRS1Q15050 365 aaKnown RBP22.47■■□□□ 1.19
ITGB5-205ENST00000474838 CARD14Q9BXL6 1004 aa22.46■■□□□ 1.19
ITGB5-205ENST00000474838 SMG6Q86US8 1419 aaKnown RBP22.46■■□□□ 1.19
ITGB5-205ENST00000474838 KIF24Q5T7B8 1368 aa22.45■■□□□ 1.18
ITGB5-205ENST00000474838 EIF4G2P78344 907 aaKnown RBP eCLIP22.44■■□□□ 1.18
ITGB5-205ENST00000474838 FLT4P35916 1363 aa22.43■■□□□ 1.18
ITGB5-205ENST00000474838 KCNQ2O43526 872 aa22.43■■□□□ 1.18
ITGB5-205ENST00000474838 RGPD2P0DJD1 1756 aa22.42■■□□□ 1.18
ITGB5-205ENST00000474838 MEGF6O75095 1541 aa22.41■■□□□ 1.18
ITGB5-205ENST00000474838 INSRP06213 1382 aa22.41■■□□□ 1.18
ITGB5-205ENST00000474838 PROM2Q8N271 834 aa22.41■■□□□ 1.18
ITGB5-205ENST00000474838 ACSBG1Q96GR2 724 aa22.41■■□□□ 1.18
ITGB5-205ENST00000474838 HSPA5P11021 654 aaKnown RBP22.4■■□□□ 1.18
ITGB5-205ENST00000474838 ANO8Q9HCE9 1232 aaPredicted RBP22.4■■□□□ 1.18
ITGB5-205ENST00000474838 CGNL1Q0VF96 1302 aa22.39■■□□□ 1.18
ITGB5-205ENST00000474838 TXNRD1Q16881 649 aa22.39■■□□□ 1.17
ITGB5-205ENST00000474838 ANKRD26Q9UPS8 1709 aa22.39■■□□□ 1.17
ITGB5-205ENST00000474838 BTAF1O14981 1849 aa22.38■■□□□ 1.17
ITGB5-205ENST00000474838 SHANK3Q9BYB0 1731 aa22.38■■□□□ 1.17
ITGB5-205ENST00000474838 NBPF6Q5VWK0 638 aa22.38■■□□□ 1.17
ITGB5-205ENST00000474838 NBPF4Q96M43 638 aa22.38■■□□□ 1.17
ITGB5-205ENST00000474838 DDX54Q8TDD1 881 aaKnown RBP22.37■■□□□ 1.17
ITGB5-205ENST00000474838 POLR3GLQ9BT43 218 aa22.37■■□□□ 1.17
ITGB5-205ENST00000474838 CASZ1Q86V15 1759 aa22.36■■□□□ 1.17
ITGB5-205ENST00000474838 HSP90AB2PQ58FF8 381 aa22.36■■□□□ 1.17
ITGB5-205ENST00000474838 ZCRB1Q8TBF4 217 aaKnown RBP22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms