RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 EVC2Q86UK5 1308 aa20.14■□□□□ 0.81
CCDC78-209ENST00000474647 DDB1Q16531 1140 aa20.14■□□□□ 0.81
CCDC78-209ENST00000474647 C11orf95C9JLR9 678 aaPredicted RBP20.13■□□□□ 0.81
CCDC78-209ENST00000474647 SOX12O15370 315 aa20.13■□□□□ 0.81
CCDC78-209ENST00000474647 PPP1R1BQ9UD71 204 aaPredicted RBP20.13■□□□□ 0.81
CCDC78-209ENST00000474647 L3MBTL2Q969R5 705 aa20.11■□□□□ 0.81
CCDC78-209ENST00000474647 ROCK2O75116 1388 aaKnown RBP20.1■□□□□ 0.81
CCDC78-209ENST00000474647 WDR17Q8IZU2 1322 aa20.1■□□□□ 0.81
CCDC78-209ENST00000474647 NFAT5O94916 1531 aa20.1■□□□□ 0.81
CCDC78-209ENST00000474647 MYOM1P52179 1685 aa20.1■□□□□ 0.81
CCDC78-209ENST00000474647 USP54Q70EL1 1684 aa20.1■□□□□ 0.81
CCDC78-209ENST00000474647 SPON1Q9HCB6 807 aa20.09■□□□□ 0.81
CCDC78-209ENST00000474647 AXIN2Q9Y2T1 843 aa20.09■□□□□ 0.81
CCDC78-209ENST00000474647 NHSQ6T4R5 1651 aa20.09■□□□□ 0.81
CCDC78-209ENST00000474647 CSB-PGBD3P0DP91 1061 aa20.08■□□□□ 0.81
CCDC78-209ENST00000474647 TTC21BQ7Z4L5 1316 aa20.07■□□□□ 0.8
CCDC78-209ENST00000474647 KCNQ2O43526 872 aa20.07■□□□□ 0.8
CCDC78-209ENST00000474647 PTF1AQ7RTS3 328 aa20.06■□□□□ 0.8
CCDC78-209ENST00000474647 KCNH5Q8NCM2 988 aa20.06■□□□□ 0.8
CCDC78-209ENST00000474647 BTAF1O14981 1849 aa20.06■□□□□ 0.8
CCDC78-209ENST00000474647 ABCC6O95255 1503 aa20.06■□□□□ 0.8
CCDC78-209ENST00000474647 PLSCR1O15162 318 aa20.05■□□□□ 0.8
CCDC78-209ENST00000474647 SIN3AQ96ST3 1273 aa20.05■□□□□ 0.8
CCDC78-209ENST00000474647 KTN1Q86UP2 1357 aaKnown RBP20.05■□□□□ 0.8
CCDC78-209ENST00000474647 TTC21AQ8NDW8 1320 aa20.04■□□□□ 0.8
CCDC78-209ENST00000474647 YY1P25490 414 aa20.04■□□□□ 0.8
CCDC78-209ENST00000474647 NEUROD1Q13562 356 aa20.04■□□□□ 0.8
CCDC78-209ENST00000474647 ARHGEF25Q86VW2 580 aa20.04■□□□□ 0.8
CCDC78-209ENST00000474647 MARCH10Q8NA82 808 aaPredicted RBP20.04■□□□□ 0.8
CCDC78-209ENST00000474647 ZNF692Q9BU19 519 aaPredicted RBP20.04■□□□□ 0.8
CCDC78-209ENST00000474647 CDCA7Q9BWT1 371 aaPredicted RBP20.04■□□□□ 0.8
CCDC78-209ENST00000474647 BCL11BQ9C0K0 894 aaPredicted RBP20.04■□□□□ 0.8
CCDC78-209ENST00000474647 ANO8Q9HCE9 1232 aaPredicted RBP20.04■□□□□ 0.8
CCDC78-209ENST00000474647 NINLQ9Y2I6 1382 aa20.04■□□□□ 0.8
CCDC78-209ENST00000474647 TNS2Q63HR2 1409 aa20.02■□□□□ 0.79
CCDC78-209ENST00000474647 DCAF8L1A6NGE4 600 aa20.01■□□□□ 0.79
CCDC78-209ENST00000474647 CARD10Q9BWT7 1032 aa20.01■□□□□ 0.79
CCDC78-209ENST00000474647 CHD4Q14839 1912 aa20.01■□□□□ 0.79
CCDC78-209ENST00000474647 BCL9O00512 1426 aa20.01■□□□□ 0.79
CCDC78-209ENST00000474647 CCDC7Q96M83 1385 aa20■□□□□ 0.79
CCDC78-209ENST00000474647 FAM208AQ9UK61 1670 aaKnown RBP20■□□□□ 0.79
CCDC78-209ENST00000474647 EXOC5O00471 708 aa19.98■□□□□ 0.79
CCDC78-209ENST00000474647 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.98■□□□□ 0.79
CCDC78-209ENST00000474647 PDGFDQ9GZP0 370 aaPredicted RBP19.98■□□□□ 0.79
CCDC78-209ENST00000474647 RGPD2P0DJD1 1756 aa19.98■□□□□ 0.79
CCDC78-209ENST00000474647 ZBTB7AO95365 584 aa19.97■□□□□ 0.79
CCDC78-209ENST00000474647 TXNRD1Q16881 649 aa19.96■□□□□ 0.79
CCDC78-209ENST00000474647 PROM2Q8N271 834 aa19.96■□□□□ 0.79
CCDC78-209ENST00000474647 STK32BQ9NY57 414 aa19.96■□□□□ 0.79
CCDC78-209ENST00000474647 PAPPAQ13219 1627 aa19.95■□□□□ 0.78
CCDC78-209ENST00000474647 CD163L1Q9NR16 1453 aa19.95■□□□□ 0.78
CCDC78-209ENST00000474647 TUBGCP6Q96RT7 1819 aa19.95■□□□□ 0.78
CCDC78-209ENST00000474647 DOT1LQ8TEK3 1739 aa19.93■□□□□ 0.78
CCDC78-209ENST00000474647 NME9Q86XW9 330 aa19.93■□□□□ 0.78
CCDC78-209ENST00000474647 TMC1Q8TDI8 760 aa19.93■□□□□ 0.78
CCDC78-209ENST00000474647 ACSBG1Q96GR2 724 aa19.93■□□□□ 0.78
CCDC78-209ENST00000474647 NLRP2Q9NX02 1062 aa19.93■□□□□ 0.78
CCDC78-209ENST00000474647 ATF5Q9Y2D1 282 aaPredicted RBP19.93■□□□□ 0.78
CCDC78-209ENST00000474647 ERBB3P21860 1342 aa19.93■□□□□ 0.78
CCDC78-209ENST00000474647 SBNO2Q9Y2G9 1366 aa19.93■□□□□ 0.78
CCDC78-209ENST00000474647 QSER1Q2KHR3 1735 aa19.93■□□□□ 0.78
CCDC78-209ENST00000474647 UTRNP46939 3433 aa19.92■□□□□ 0.78
CCDC78-209ENST00000474647 USP31Q70CQ4 1352 aa19.92■□□□□ 0.78
CCDC78-209ENST00000474647 SLC15A2Q16348 729 aa19.91■□□□□ 0.78
CCDC78-209ENST00000474647 SHANK3Q9BYB0 1731 aa19.9■□□□□ 0.78
CCDC78-209ENST00000474647 CARD11Q9BXL7 1154 aa19.9■□□□□ 0.78
CCDC78-209ENST00000474647 IL2RBP14784 551 aa19.89■□□□□ 0.77
CCDC78-209ENST00000474647 EDC4Q6P2E9 1401 aaKnown RBP19.89■□□□□ 0.77
CCDC78-209ENST00000474647 HDGFL2Q7Z4V5 671 aaPredicted RBP19.89■□□□□ 0.77
CCDC78-209ENST00000474647 PTGER2P43116 358 aa19.88■□□□□ 0.77
CCDC78-209ENST00000474647 ANKRD24Q8TF21 1146 aa19.88■□□□□ 0.77
CCDC78-209ENST00000474647 A0A1W2PP64 1363 aa19.86■□□□□ 0.77
CCDC78-209ENST00000474647 LY75O60449 1722 aa19.86■□□□□ 0.77
CCDC78-209ENST00000474647 FHDC1Q9C0D6 1143 aaPredicted RBP19.85■□□□□ 0.77
CCDC78-209ENST00000474647 MTFR1LQ9H019 292 aa19.85■□□□□ 0.77
CCDC78-209ENST00000474647 SLC12A5Q9H2X9 1139 aa19.85■□□□□ 0.77
CCDC78-209ENST00000474647 KIF20BQ96Q89 1820 aa19.83■□□□□ 0.77
CCDC78-209ENST00000474647 TERF2IPQ9NYB0 399 aa19.83■□□□□ 0.77
CCDC78-209ENST00000474647 TONSLQ96HA7 1378 aa19.83■□□□□ 0.76
CCDC78-209ENST00000474647 COL24A1Q17RW2 1714 aa19.82■□□□□ 0.76
CCDC78-209ENST00000474647 LTV1Q96GA3 475 aaPredicted RBP19.82■□□□□ 0.76
CCDC78-209ENST00000474647 SYT17Q9BSW7 474 aa19.81■□□□□ 0.76
CCDC78-209ENST00000474647 ZNF827Q17R98 1081 aa19.8■□□□□ 0.76
CCDC78-209ENST00000474647 GOLGB1Q14789 3259 aaKnown RBP19.8■□□□□ 0.76
CCDC78-209ENST00000474647 DDX54Q8TDD1 881 aaKnown RBP19.79■□□□□ 0.76
CCDC78-209ENST00000474647 ARXQ96QS3 562 aa19.78■□□□□ 0.76
CCDC78-209ENST00000474647 SGIP1Q9BQI5 828 aa19.78■□□□□ 0.76
CCDC78-209ENST00000474647 LRRC4BQ9NT99 713 aa19.77■□□□□ 0.76
CCDC78-209ENST00000474647 C5P01031 1676 aa19.76■□□□□ 0.75
CCDC78-209ENST00000474647 KLHL34Q8N239 644 aa19.76■□□□□ 0.75
CCDC78-209ENST00000474647 IP6K1Q92551 441 aa19.76■□□□□ 0.75
CCDC78-209ENST00000474647 SYTL4Q96C24 671 aaPredicted RBP19.76■□□□□ 0.75
CCDC78-209ENST00000474647 TAF1LQ8IZX4 1826 aa19.76■□□□□ 0.75
CCDC78-209ENST00000474647 COG3Q96JB2 828 aa19.75■□□□□ 0.75
CCDC78-209ENST00000474647 ZNF784Q8NCA9 323 aaPredicted RBP19.74■□□□□ 0.75
CCDC78-209ENST00000474647 ITGB4P16144 1822 aa19.74■□□□□ 0.75
CCDC78-209ENST00000474647 MEGF6O75095 1541 aa19.73■□□□□ 0.75
CCDC78-209ENST00000474647 AMPHP49418 695 aa19.73■□□□□ 0.75
CCDC78-209ENST00000474647 HOXC9P31274 260 aa19.72■□□□□ 0.75
CCDC78-209ENST00000474647 MAP3K19Q56UN5 1328 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms