RNA–Protein interactions for RNA: ENST00000474258.1

SEMA4D-216, Transcript of semaphorin 4D, humanhuman

TSL 4

Gene SEMA4D, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-216ENST00000474258 ARHGEF25Q86VW2 580 aa15.69■□□□□ 0.1
SEMA4D-216ENST00000474258 CAMKK2Q96RR4 588 aa15.69■□□□□ 0.1
SEMA4D-216ENST00000474258 AXIN2Q9Y2T1 843 aa15.68■□□□□ 0.1
SEMA4D-216ENST00000474258 PARD3Q8TEW0 1356 aa15.67■□□□□ 0.1
SEMA4D-216ENST00000474258 SOX12O15370 315 aa15.67■□□□□ 0.1
SEMA4D-216ENST00000474258 WDR17Q8IZU2 1322 aa15.67■□□□□ 0.1
SEMA4D-216ENST00000474258 TMC1Q8TDI8 760 aa15.66■□□□□ 0.1
SEMA4D-216ENST00000474258 USP54Q70EL1 1684 aa15.66■□□□□ 0.1
SEMA4D-216ENST00000474258 RREB1Q92766 1687 aa15.66■□□□□ 0.1
SEMA4D-216ENST00000474258 LRRC37A3O60309 1634 aa15.65■□□□□ 0.1
SEMA4D-216ENST00000474258 LTN1O94822 1766 aa15.65■□□□□ 0.1
SEMA4D-216ENST00000474258 NFAT5O94916 1531 aa15.65■□□□□ 0.1
SEMA4D-216ENST00000474258 R3HDM1Q15032 1099 aaKnown RBP15.65■□□□□ 0.1
SEMA4D-216ENST00000474258 DDB1Q16531 1140 aa15.65■□□□□ 0.1
SEMA4D-216ENST00000474258 HDGFL2Q7Z4V5 671 aaPredicted RBP15.65■□□□□ 0.1
SEMA4D-216ENST00000474258 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.65■□□□□ 0.1
SEMA4D-216ENST00000474258 PUS7Q96PZ0 661 aaKnown RBP15.65■□□□□ 0.1
SEMA4D-216ENST00000474258 CDCA7Q9BWT1 371 aaPredicted RBP15.65■□□□□ 0.1
SEMA4D-216ENST00000474258 USP31Q70CQ4 1352 aa15.64■□□□□ 0.09
SEMA4D-216ENST00000474258 CSB-PGBD3P0DP91 1061 aa15.64■□□□□ 0.09
SEMA4D-216ENST00000474258 PEAK1Q9H792 1746 aa15.64■□□□□ 0.09
SEMA4D-216ENST00000474258 CD163L1Q9NR16 1453 aa15.64■□□□□ 0.09
SEMA4D-216ENST00000474258 ABCC6O95255 1503 aa15.63■□□□□ 0.09
SEMA4D-216ENST00000474258 NUP188Q5SRE5 1749 aa15.63■□□□□ 0.09
SEMA4D-216ENST00000474258 KAT6BQ8WYB5 2073 aa15.63■□□□□ 0.09
SEMA4D-216ENST00000474258 OVOS2A0A0G2JMS6 1433 aa15.63■□□□□ 0.09
SEMA4D-216ENST00000474258 OVOS2A0A0J9YW53 1432 aa15.63■□□□□ 0.09
SEMA4D-216ENST00000474258 OVOS2Q6IE36 1432 aa15.63■□□□□ 0.09
SEMA4D-216ENST00000474258 CARD10Q9BWT7 1032 aa15.63■□□□□ 0.09
SEMA4D-216ENST00000474258 SLC12A5Q9H2X9 1139 aa15.63■□□□□ 0.09
SEMA4D-216ENST00000474258 SLC24A1O60721 1099 aa15.62■□□□□ 0.09
SEMA4D-216ENST00000474258 NME9Q86XW9 330 aa15.62■□□□□ 0.09
SEMA4D-216ENST00000474258 TERF2IPQ9NYB0 399 aa15.62■□□□□ 0.09
SEMA4D-216ENST00000474258 EDC4Q6P2E9 1401 aaKnown RBP15.6■□□□□ 0.09
SEMA4D-216ENST00000474258 RGPD3A6NKT7 1758 aaPredicted RBP15.6■□□□□ 0.09
SEMA4D-216ENST00000474258 RGPD4Q7Z3J3 1758 aa15.6■□□□□ 0.09
SEMA4D-216ENST00000474258 NBPF14Q5TI25 921 aa15.6■□□□□ 0.09
SEMA4D-216ENST00000474258 CCDC7Q96M83 1385 aa15.6■□□□□ 0.09
SEMA4D-216ENST00000474258 ST20-MTHFSA0A0A6YYL1 179 aa15.59■□□□□ 0.09
SEMA4D-216ENST00000474258 TESK2Q96S53 571 aa15.59■□□□□ 0.09
SEMA4D-216ENST00000474258 A0A1W2PP64 1363 aa15.59■□□□□ 0.09
SEMA4D-216ENST00000474258 EXOC5O00471 708 aa15.58■□□□□ 0.08
SEMA4D-216ENST00000474258 PLSCR1O15162 318 aa15.58■□□□□ 0.08
SEMA4D-216ENST00000474258 MARCH10Q8NA82 808 aaPredicted RBP15.58■□□□□ 0.08
SEMA4D-216ENST00000474258 NINLQ9Y2I6 1382 aa15.58■□□□□ 0.08
SEMA4D-216ENST00000474258 BCL11BQ9C0K0 894 aaPredicted RBP15.57■□□□□ 0.08
SEMA4D-216ENST00000474258 BCL9O00512 1426 aa15.57■□□□□ 0.08
SEMA4D-216ENST00000474258 ERBB3P21860 1342 aa15.56■□□□□ 0.08
SEMA4D-216ENST00000474258 NLRP2Q9NX02 1062 aa15.55■□□□□ 0.08
SEMA4D-216ENST00000474258 ANKRD24Q8TF21 1146 aa15.53■□□□□ 0.08
SEMA4D-216ENST00000474258 TNS2Q63HR2 1409 aa15.52■□□□□ 0.08
SEMA4D-216ENST00000474258 FAM208AQ9UK61 1670 aaKnown RBP15.52■□□□□ 0.08
SEMA4D-216ENST00000474258 IL2RBP14784 551 aa15.52■□□□□ 0.08
SEMA4D-216ENST00000474258 TMF1P82094 1093 aa15.52■□□□□ 0.08
SEMA4D-216ENST00000474258 PTF1AQ7RTS3 328 aa15.52■□□□□ 0.08
SEMA4D-216ENST00000474258 COG3Q96JB2 828 aa15.52■□□□□ 0.08
SEMA4D-216ENST00000474258 IP6K1Q92551 441 aa15.51■□□□□ 0.07
SEMA4D-216ENST00000474258 ANKRD36BQ8N2N9 1353 aa15.49■□□□□ 0.07
SEMA4D-216ENST00000474258 USP47Q96K76 1375 aa15.49■□□□□ 0.07
SEMA4D-216ENST00000474258 RGPD2P0DJD1 1756 aa15.49■□□□□ 0.07
SEMA4D-216ENST00000474258 NHSQ6T4R5 1651 aa15.49■□□□□ 0.07
SEMA4D-216ENST00000474258 PROM2Q8N271 834 aa15.49■□□□□ 0.07
SEMA4D-216ENST00000474258 SPON1Q9HCB6 807 aa15.48■□□□□ 0.07
SEMA4D-216ENST00000474258 KCNQ2O43526 872 aa15.47■□□□□ 0.07
SEMA4D-216ENST00000474258 AMPHP49418 695 aa15.47■□□□□ 0.07
SEMA4D-216ENST00000474258 TXNRD1Q16881 649 aa15.47■□□□□ 0.07
SEMA4D-216ENST00000474258 CDCA8Q53HL2 280 aa15.47■□□□□ 0.07
SEMA4D-216ENST00000474258 LTV1Q96GA3 475 aaPredicted RBP15.47■□□□□ 0.07
SEMA4D-216ENST00000474258 TIMELESSQ9UNS1 1208 aa15.47■□□□□ 0.07
SEMA4D-216ENST00000474258 BTAF1O14981 1849 aa15.47■□□□□ 0.07
SEMA4D-216ENST00000474258 KIF20BQ96Q89 1820 aa15.47■□□□□ 0.07
SEMA4D-216ENST00000474258 HOXC9P31274 260 aa15.46■□□□□ 0.07
SEMA4D-216ENST00000474258 ACSBG1Q96GR2 724 aa15.46■□□□□ 0.07
SEMA4D-216ENST00000474258 MAP3K19Q56UN5 1328 aa15.45■□□□□ 0.06
SEMA4D-216ENST00000474258 CASZ1Q86V15 1759 aa15.45■□□□□ 0.06
SEMA4D-216ENST00000474258 FYB1O15117 783 aa15.45■□□□□ 0.06
SEMA4D-216ENST00000474258 ANO8Q9HCE9 1232 aaPredicted RBP15.45■□□□□ 0.06
SEMA4D-216ENST00000474258 FBLN1P23142 703 aa15.44■□□□□ 0.06
SEMA4D-216ENST00000474258 STK32BQ9NY57 414 aa15.44■□□□□ 0.06
SEMA4D-216ENST00000474258 PPP1R1BQ9UD71 204 aaPredicted RBP15.44■□□□□ 0.06
SEMA4D-216ENST00000474258 GGNBP2Q9H3C7 697 aa15.43■□□□□ 0.06
SEMA4D-216ENST00000474258 CLSPNQ9HAW4 1339 aa15.43■□□□□ 0.06
SEMA4D-216ENST00000474258 RTL1A6NKG5 1358 aa15.41■□□□□ 0.06
SEMA4D-216ENST00000474258 RRS1Q15050 365 aaKnown RBP15.41■□□□□ 0.06
SEMA4D-216ENST00000474258 SLC15A2Q16348 729 aa15.41■□□□□ 0.06
SEMA4D-216ENST00000474258 DDX54Q8TDD1 881 aaKnown RBP15.41■□□□□ 0.06
SEMA4D-216ENST00000474258 MYOM1P52179 1685 aa15.41■□□□□ 0.06
SEMA4D-216ENST00000474258 SHANK3Q9BYB0 1731 aa15.4■□□□□ 0.06
SEMA4D-216ENST00000474258 MAP2P11137 1827 aaKnown RBP15.39■□□□□ 0.05
SEMA4D-216ENST00000474258 PDGFDQ9GZP0 370 aaPredicted RBP15.39■□□□□ 0.05
SEMA4D-216ENST00000474258 ZCRB1Q8TBF4 217 aaKnown RBP15.38■□□□□ 0.05
SEMA4D-216ENST00000474258 DOT1LQ8TEK3 1739 aa15.37■□□□□ 0.05
SEMA4D-216ENST00000474258 SMG6Q86US8 1419 aaKnown RBP15.37■□□□□ 0.05
SEMA4D-216ENST00000474258 ZBTB7AO95365 584 aa15.37■□□□□ 0.05
SEMA4D-216ENST00000474258 NBPF6Q5VWK0 638 aa15.37■□□□□ 0.05
SEMA4D-216ENST00000474258 CCER1Q8TC90 406 aaPredicted RBP15.37■□□□□ 0.05
SEMA4D-216ENST00000474258 NBPF4Q96M43 638 aa15.37■□□□□ 0.05
SEMA4D-216ENST00000474258 PAPPAQ13219 1627 aa15.36■□□□□ 0.05
SEMA4D-216ENST00000474258 DCAF8L1A6NGE4 600 aa15.36■□□□□ 0.05
SEMA4D-216ENST00000474258 CARD14Q9BXL6 1004 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms