RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 CNGB1Q14028 1251 aaPredicted RBP14.14□□□□□ -0.15
CASC3-204ENST00000474190 ANKRD26Q9UPS8 1709 aa14.13□□□□□ -0.15
CASC3-204ENST00000474190 INSRP06213 1382 aa14.13□□□□□ -0.15
CASC3-204ENST00000474190 HOXC9P31274 260 aa14.13□□□□□ -0.15
CASC3-204ENST00000474190 IP6K1Q92551 441 aa14.13□□□□□ -0.15
CASC3-204ENST00000474190 HSP90AB2PQ58FF8 381 aa14.12□□□□□ -0.15
CASC3-204ENST00000474190 COL3A1P02461 1466 aaPredicted RBP14.12□□□□□ -0.15
CASC3-204ENST00000474190 MTHFSP49914 203 aa14.11□□□□□ -0.15
CASC3-204ENST00000474190 RALBP1Q15311 655 aa14.11□□□□□ -0.15
CASC3-204ENST00000474190 PRDM11Q9NQV5 511 aa14.11□□□□□ -0.15
CASC3-204ENST00000474190 RTL1A6NKG5 1358 aa14.1□□□□□ -0.15
CASC3-204ENST00000474190 KIF24Q5T7B8 1368 aa14.1□□□□□ -0.15
CASC3-204ENST00000474190 CCDC184Q52MB2 194 aa14.1□□□□□ -0.15
CASC3-204ENST00000474190 C8orf37Q96NL8 207 aa14.1□□□□□ -0.15
CASC3-204ENST00000474190 AFF2P51816 1311 aa14.1□□□□□ -0.15
CASC3-204ENST00000474190 ABCC6O95255 1503 aa14.1□□□□□ -0.15
CASC3-204ENST00000474190 BTG4Q9NY30 223 aa14.09□□□□□ -0.15
CASC3-204ENST00000474190 COL5A2P05997 1499 aaPredicted RBP14.09□□□□□ -0.15
CASC3-204ENST00000474190 FLT4P35916 1363 aa14.09□□□□□ -0.15
CASC3-204ENST00000474190 ERBB3P21860 1342 aa14.08□□□□□ -0.16
CASC3-204ENST00000474190 IL13P35225 146 aa14.07□□□□□ -0.16
CASC3-204ENST00000474190 HAP1P54257 671 aaPredicted RBP14.07□□□□□ -0.16
CASC3-204ENST00000474190 EIF4A2Q14240 407 aaKnown RBP14.07□□□□□ -0.16
CASC3-204ENST00000474190 BLMP54132 1417 aaPredicted RBP14.07□□□□□ -0.16
CASC3-204ENST00000474190 COL14A1Q05707 1796 aaKnown RBP14.06□□□□□ -0.16
CASC3-204ENST00000474190 DIEXFQ68CQ4 756 aaKnown RBP14.06□□□□□ -0.16
CASC3-204ENST00000474190 LARP1Q6PKG0 1096 aaKnown RBP14.06□□□□□ -0.16
CASC3-204ENST00000474190 UNC5CLQ8IV45 518 aa14.06□□□□□ -0.16
CASC3-204ENST00000474190 NGLY1Q96IV0 654 aa14.06□□□□□ -0.16
CASC3-204ENST00000474190 EP400Q96L91 3159 aa14.06□□□□□ -0.16
CASC3-204ENST00000474190 MYBBP1AQ9BQG0 1328 aaKnown RBP14.06□□□□□ -0.16
CASC3-204ENST00000474190 ATRNO75882 1429 aa14.06□□□□□ -0.16
CASC3-204ENST00000474190 NCAPD2Q15021 1401 aa14.06□□□□□ -0.16
CASC3-204ENST00000474190 NRAPQ86VF7 1730 aa14.05□□□□□ -0.16
CASC3-204ENST00000474190 ZBTB7CA1YPR0 619 aa14.05□□□□□ -0.16
CASC3-204ENST00000474190 AMPHP49418 695 aa14.05□□□□□ -0.16
CASC3-204ENST00000474190 ANKRD24Q8TF21 1146 aa14.05□□□□□ -0.16
CASC3-204ENST00000474190 PPM1GO15355 546 aaPredicted RBP14.04□□□□□ -0.16
CASC3-204ENST00000474190 NBPF6Q5VWK0 638 aa14.04□□□□□ -0.16
CASC3-204ENST00000474190 NBPF4Q96M43 638 aa14.04□□□□□ -0.16
CASC3-204ENST00000474190 WDR17Q8IZU2 1322 aa14.04□□□□□ -0.16
CASC3-204ENST00000474190 PLCH1Q4KWH8 1693 aa14.04□□□□□ -0.16
CASC3-204ENST00000474190 VPS72Q15906 364 aa14.03□□□□□ -0.16
CASC3-204ENST00000474190 EYA1Q99502 592 aa14.03□□□□□ -0.16
CASC3-204ENST00000474190 USP21Q9UK80 565 aa14.03□□□□□ -0.16
CASC3-204ENST00000474190 SPATA31A5Q5VU36 1347 aa14.03□□□□□ -0.16
CASC3-204ENST00000474190 SPATA31A7Q8IWB4 1347 aa14.03□□□□□ -0.16
CASC3-204ENST00000474190 LTN1O94822 1766 aa14.02□□□□□ -0.16
CASC3-204ENST00000474190 SPATA31A1Q5TZJ5 1347 aa14.02□□□□□ -0.17
CASC3-204ENST00000474190 MIER1Q8N108 512 aa14.02□□□□□ -0.17
CASC3-204ENST00000474190 IGSF1Q8N6C5 1336 aa14.01□□□□□ -0.17
CASC3-204ENST00000474190 ANP32CO43423 234 aa14.01□□□□□ -0.17
CASC3-204ENST00000474190 LTV1Q96GA3 475 aaPredicted RBP14.01□□□□□ -0.17
CASC3-204ENST00000474190 DISP2A7MBM2 1401 aa14□□□□□ -0.17
CASC3-204ENST00000474190 CRB1P82279 1406 aa14□□□□□ -0.17
CASC3-204ENST00000474190 MAP2P11137 1827 aaKnown RBP14□□□□□ -0.17
CASC3-204ENST00000474190 RBM6P78332 1123 aaKnown RBP14□□□□□ -0.17
CASC3-204ENST00000474190 CARD10Q9BWT7 1032 aa14□□□□□ -0.17
CASC3-204ENST00000474190 STRN4Q9NRL3 753 aa14□□□□□ -0.17
CASC3-204ENST00000474190 NWD2Q9ULI1 1742 aa14□□□□□ -0.17
CASC3-204ENST00000474190 GLI3P10071 1580 aa14□□□□□ -0.17
CASC3-204ENST00000474190 ONECUT3O60422 494 aaPredicted RBP13.99□□□□□ -0.17
CASC3-204ENST00000474190 AEBP1Q8IUX7 1158 aa13.99□□□□□ -0.17
CASC3-204ENST00000474190 RGPD1P0DJD0 1748 aa13.98□□□□□ -0.17
CASC3-204ENST00000474190 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.98□□□□□ -0.17
CASC3-204ENST00000474190 KDRP35968 1356 aa13.98□□□□□ -0.17
CASC3-204ENST00000474190 FAM208AQ9UK61 1670 aaKnown RBP13.98□□□□□ -0.17
CASC3-204ENST00000474190 USHBP1Q8N6Y0 703 aa13.98□□□□□ -0.17
CASC3-204ENST00000474190 GJD4Q96KN9 370 aaPredicted RBP13.98□□□□□ -0.17
CASC3-204ENST00000474190 QTRT2Q9H974 415 aaKnown RBP13.98□□□□□ -0.17
CASC3-204ENST00000474190 RGPD5Q99666 1765 aa13.98□□□□□ -0.17
CASC3-204ENST00000474190 DIAPH1O60610 1272 aaKnown RBP13.97□□□□□ -0.17
CASC3-204ENST00000474190 TRPC5Q9UL62 973 aaPredicted RBP13.97□□□□□ -0.17
CASC3-204ENST00000474190 BARGINQ6ZT62 677 aa13.96□□□□□ -0.17
CASC3-204ENST00000474190 PNISRQ8TF01 805 aaKnown RBP13.96□□□□□ -0.17
CASC3-204ENST00000474190 NLRP2Q9NX02 1062 aa13.96□□□□□ -0.17
CASC3-204ENST00000474190 MEGF6O75095 1541 aa13.95□□□□□ -0.18
CASC3-204ENST00000474190 EVA1CP58658 441 aa13.95□□□□□ -0.18
CASC3-204ENST00000474190 TOM1L2Q6ZVM7 507 aa13.95□□□□□ -0.18
CASC3-204ENST00000474190 TCP11L2Q8N4U5 519 aa13.95□□□□□ -0.18
CASC3-204ENST00000474190 RSPH6AQ9H0K4 717 aa13.94□□□□□ -0.18
CASC3-204ENST00000474190 CSB-PGBD3P0DP91 1061 aa13.93□□□□□ -0.18
CASC3-204ENST00000474190 PLEKHF1Q96S99 279 aa13.93□□□□□ -0.18
CASC3-204ENST00000474190 USP35Q9P2H5 1018 aa13.93□□□□□ -0.18
CASC3-204ENST00000474190 THRAP3Q9Y2W1 955 aaKnown RBP13.93□□□□□ -0.18
CASC3-204ENST00000474190 CCER2I3L3R5 266 aa13.92□□□□□ -0.18
CASC3-204ENST00000474190 HMOX1P09601 288 aa13.92□□□□□ -0.18
CASC3-204ENST00000474190 FAM98CQ17RN3 349 aaKnown RBP13.92□□□□□ -0.18
CASC3-204ENST00000474190 SULT6B1Q6IMI4 303 aa13.92□□□□□ -0.18
CASC3-204ENST00000474190 CFAP53Q96M91 514 aa13.92□□□□□ -0.18
CASC3-204ENST00000474190 ADAMTS8Q9UP79 889 aa13.92□□□□□ -0.18
CASC3-204ENST00000474190 LRP5O75197 1615 aa13.92□□□□□ -0.18
CASC3-204ENST00000474190 THSD7AQ9UPZ6 1657 aa13.91□□□□□ -0.18
CASC3-204ENST00000474190 RGPD2P0DJD1 1756 aa13.91□□□□□ -0.18
CASC3-204ENST00000474190 OVOS2A0A0G2JMS6 1433 aa13.91□□□□□ -0.18
CASC3-204ENST00000474190 PHACTR3Q96KR7 559 aa13.91□□□□□ -0.18
CASC3-204ENST00000474190 MRS2Q9HD23 443 aa13.9□□□□□ -0.18
CASC3-204ENST00000474190 U2SURPO15042 1029 aaKnown RBP13.89□□□□□ -0.19
CASC3-204ENST00000474190 IL2RBP14784 551 aa13.89□□□□□ -0.19
CASC3-204ENST00000474190 FCHSD2O94868 740 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms