RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 ZNF777Q9ULD5 760 aaPredicted RBP7.66□□□□□ -1.18
BRCA1-212ENST00000473961 ZNF330Q9Y3S2 320 aaPredicted RBP7.66□□□□□ -1.18
BRCA1-212ENST00000473961 KDM4AO75164 1064 aa7.65□□□□□ -1.18
BRCA1-212ENST00000473961 ADH1CP00326 375 aa7.64□□□□□ -1.19
BRCA1-212ENST00000473961 WDR4P57081 412 aaKnown RBP7.64□□□□□ -1.19
BRCA1-212ENST00000473961 CSPP1Q1MSJ5 1256 aa7.64□□□□□ -1.19
BRCA1-212ENST00000473961 POM121Q96HA1 1249 aa7.64□□□□□ -1.19
BRCA1-212ENST00000473961 KLF16Q9BXK1 252 aaPredicted RBP7.64□□□□□ -1.19
BRCA1-212ENST00000473961 COL25A1Q9BXS0 654 aaPredicted RBP7.64□□□□□ -1.19
BRCA1-212ENST00000473961 ZBTB3Q9H5J0 574 aa7.64□□□□□ -1.19
BRCA1-212ENST00000473961 MOXD2PA6NHM9 499 aa7.63□□□□□ -1.19
BRCA1-212ENST00000473961 JUNDP17535 347 aa7.63□□□□□ -1.19
BRCA1-212ENST00000473961 SNRKQ9NRH2 765 aa7.63□□□□□ -1.19
BRCA1-212ENST00000473961 ZBTB7CA1YPR0 619 aa7.62□□□□□ -1.19
BRCA1-212ENST00000473961 MSTNO14793 375 aa7.62□□□□□ -1.19
BRCA1-212ENST00000473961 LILRB3O75022 631 aa7.62□□□□□ -1.19
BRCA1-212ENST00000473961 AP1G2O75843 785 aa7.62□□□□□ -1.19
BRCA1-212ENST00000473961 ITGB2P05107 769 aa7.62□□□□□ -1.19
BRCA1-212ENST00000473961 RNFT1Q5M7Z0 435 aa7.62□□□□□ -1.19
BRCA1-212ENST00000473961 Q8N3U1 123 aa7.62□□□□□ -1.19
BRCA1-212ENST00000473961 SPOCK3Q9BQ16 436 aa7.62□□□□□ -1.19
BRCA1-212ENST00000473961 SLURP2P0DP57 97 aa7.61□□□□□ -1.19
BRCA1-212ENST00000473961 MARSP56192 900 aaKnown RBP7.61□□□□□ -1.19
BRCA1-212ENST00000473961 HLA-CQ95604 372 aa7.61□□□□□ -1.19
BRCA1-212ENST00000473961 PLA2G4EQ3MJ16 856 aa7.6□□□□□ -1.19
BRCA1-212ENST00000473961 C6orf118Q5T5N4 469 aa7.6□□□□□ -1.19
BRCA1-212ENST00000473961 MPNDQ8N594 471 aa7.6□□□□□ -1.19
BRCA1-212ENST00000473961 MTMR14Q8NCE2 650 aa7.6□□□□□ -1.19
BRCA1-212ENST00000473961 HELBQ8NG08 1087 aaPredicted RBP7.6□□□□□ -1.19
BRCA1-212ENST00000473961 SCARF2Q96GP6 870 aaPredicted RBP7.6□□□□□ -1.19
BRCA1-212ENST00000473961 NUDT12Q9BQG2 462 aa7.6□□□□□ -1.19
BRCA1-212ENST00000473961 NDUFB9Q9Y6M9 179 aa7.6□□□□□ -1.19
BRCA1-212ENST00000473961 HOXA2O43364 376 aa7.59□□□□□ -1.19
BRCA1-212ENST00000473961 USP17L8P0C7I0 530 aa7.59□□□□□ -1.19
BRCA1-212ENST00000473961 FDX1P10109 184 aa7.59□□□□□ -1.19
BRCA1-212ENST00000473961 NDUFV2P19404 249 aa7.59□□□□□ -1.19
BRCA1-212ENST00000473961 ABL2P42684 1182 aa7.59□□□□□ -1.19
BRCA1-212ENST00000473961 PDE4CQ08493 712 aa7.59□□□□□ -1.19
BRCA1-212ENST00000473961 GDPD2Q9HCC8 539 aa7.59□□□□□ -1.19
BRCA1-212ENST00000473961 DNMT3LQ9UJW3 386 aa7.59□□□□□ -1.19
BRCA1-212ENST00000473961 PROCP04070 461 aa7.58□□□□□ -1.2
BRCA1-212ENST00000473961 QPCTQ16769 361 aa7.58□□□□□ -1.2
BRCA1-212ENST00000473961 CALR3Q96L12 384 aaKnown RBP7.58□□□□□ -1.2
BRCA1-212ENST00000473961 MTMR2Q13614 643 aa7.57□□□□□ -1.2
BRCA1-212ENST00000473961 WASHC4Q2M389 1173 aa7.57□□□□□ -1.2
BRCA1-212ENST00000473961 ZFAND3Q9H8U3 227 aa7.57□□□□□ -1.2
BRCA1-212ENST00000473961 SOS2Q07890 1332 aaPredicted RBP7.56□□□□□ -1.2
BRCA1-212ENST00000473961 PPP1R15AO75807 674 aaPredicted RBP7.56□□□□□ -1.2
BRCA1-212ENST00000473961 HRCP23327 699 aa7.56□□□□□ -1.2
BRCA1-212ENST00000473961 TRIM26Q12899 539 aaPredicted RBP7.56□□□□□ -1.2
BRCA1-212ENST00000473961 LINC01559Q495D7 138 aa7.56□□□□□ -1.2
BRCA1-212ENST00000473961 LCE3BQ5TA77 95 aa7.56□□□□□ -1.2
BRCA1-212ENST00000473961 NANOS1Q8WY41 292 aaKnown RBP7.56□□□□□ -1.2
BRCA1-212ENST00000473961 ACIN1Q9UKV3 1341 aaKnown RBP7.55□□□□□ -1.2
BRCA1-212ENST00000473961 RTL5Q5HYW3 569 aaPredicted RBP7.55□□□□□ -1.2
BRCA1-212ENST00000473961 PCDHB15Q9Y5E8 787 aa7.55□□□□□ -1.2
BRCA1-212ENST00000473961 K7ELQ4 463 aaPredicted RBP7.54□□□□□ -1.2
BRCA1-212ENST00000473961 ZIC2O95409 532 aaPredicted RBP7.54□□□□□ -1.2
BRCA1-212ENST00000473961 VARSP26640 1264 aaKnown RBP7.54□□□□□ -1.2
BRCA1-212ENST00000473961 PNMA1Q8ND90 353 aa7.54□□□□□ -1.2
BRCA1-212ENST00000473961 CABLES1Q8TDN4 633 aa7.54□□□□□ -1.2
BRCA1-212ENST00000473961 DCAF5Q96JK2 942 aa7.54□□□□□ -1.2
BRCA1-212ENST00000473961 TBC1D2BQ9UPU7 963 aa7.54□□□□□ -1.2
BRCA1-212ENST00000473961 BMP2P12643 396 aa7.53□□□□□ -1.2
BRCA1-212ENST00000473961 RANGAP1P46060 587 aaPredicted RBP7.53□□□□□ -1.2
BRCA1-212ENST00000473961 FBXO31Q5XUX0 539 aaPredicted RBP7.53□□□□□ -1.2
BRCA1-212ENST00000473961 LINC00528Q8N1L1 170 aa7.53□□□□□ -1.2
BRCA1-212ENST00000473961 TSC1Q92574 1164 aa7.53□□□□□ -1.2
BRCA1-212ENST00000473961 SYMPKQ92797 1274 aaKnown RBP7.53□□□□□ -1.2
BRCA1-212ENST00000473961 GLMNQ92990 594 aa7.53□□□□□ -1.2
BRCA1-212ENST00000473961 ITPKCQ96DU7 683 aa7.53□□□□□ -1.2
BRCA1-212ENST00000473961 KRTAP4-12Q9BQ66 201 aa7.53□□□□□ -1.2
BRCA1-212ENST00000473961 C6orf229H3BNL8 230 aa7.52□□□□□ -1.21
BRCA1-212ENST00000473961 GUCA2AQ02747 115 aa7.52□□□□□ -1.21
BRCA1-212ENST00000473961 BAP1Q92560 729 aa7.52□□□□□ -1.21
BRCA1-212ENST00000473961 TRAIPQ9BWF2 469 aa7.52□□□□□ -1.21
BRCA1-212ENST00000473961 UNC93B1Q9H1C4 597 aa7.52□□□□□ -1.21
BRCA1-212ENST00000473961 PTSQ03393 145 aa7.51□□□□□ -1.21
BRCA1-212ENST00000473961 ZNF511Q8NB15 262 aa7.51□□□□□ -1.21
BRCA1-212ENST00000473961 CCDC9Q9Y3X0 531 aaKnown RBP7.51□□□□□ -1.21
BRCA1-212ENST00000473961 CCNYL3P0C7X3 344 aa7.5□□□□□ -1.21
BRCA1-212ENST00000473961 LYPD4Q6UWN0 246 aa7.5□□□□□ -1.21
BRCA1-212ENST00000473961 MEIOBQ8N635 442 aa7.5□□□□□ -1.21
BRCA1-212ENST00000473961 GALNT6Q8NCL4 622 aa7.5□□□□□ -1.21
BRCA1-212ENST00000473961 PATL2C9JE40 543 aaKnown RBP7.49□□□□□ -1.21
BRCA1-212ENST00000473961 NR3C2P08235 984 aa7.49□□□□□ -1.21
BRCA1-212ENST00000473961 SOX11P35716 441 aa7.49□□□□□ -1.21
BRCA1-212ENST00000473961 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.48□□□□□ -1.21
BRCA1-212ENST00000473961 RETREG3Q86VR2 466 aa7.48□□□□□ -1.21
BRCA1-212ENST00000473961 GJD4Q96KN9 370 aaPredicted RBP7.48□□□□□ -1.21
BRCA1-212ENST00000473961 PCDHGC3Q9UN70 934 aa7.48□□□□□ -1.21
BRCA1-212ENST00000473961 UPP2O95045 317 aa7.47□□□□□ -1.21
BRCA1-212ENST00000473961 CTDSPL2Q05D32 466 aa7.47□□□□□ -1.21
BRCA1-212ENST00000473961 CCDC155Q8N6L0 562 aa7.47□□□□□ -1.21
BRCA1-212ENST00000473961 CDK15Q96Q40 435 aa7.47□□□□□ -1.21
BRCA1-212ENST00000473961 KRTAP9-9Q9BYP9 154 aa7.47□□□□□ -1.21
BRCA1-212ENST00000473961 KRTAP9-4Q9BYQ2 154 aa7.47□□□□□ -1.21
BRCA1-212ENST00000473961 ADAMTS2O95450 1211 aa7.46□□□□□ -1.22
BRCA1-212ENST00000473961 HDGFL1Q5TGJ6 251 aa7.46□□□□□ -1.22
BRCA1-212ENST00000473961 POM121CA8CG34 1229 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms