RNA–Protein interactions for RNA: ENST00000473420.5

CTDSP1-207, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-207ENST00000473420 ZBTB7CA1YPR0 619 aa25.88■■□□□ 1.73
CTDSP1-207ENST00000473420 PEAK1Q9H792 1746 aa25.88■■□□□ 1.73
CTDSP1-207ENST00000473420 ATRNO75882 1429 aa25.88■■□□□ 1.73
CTDSP1-207ENST00000473420 BLMP54132 1417 aaPredicted RBP25.88■■□□□ 1.73
CTDSP1-207ENST00000473420 COL5A2P05997 1499 aaPredicted RBP25.87■■□□□ 1.73
CTDSP1-207ENST00000473420 CC2D1BQ5T0F9 858 aaKnown RBP25.86■■□□□ 1.73
CTDSP1-207ENST00000473420 FAM208AQ9UK61 1670 aaKnown RBP25.85■■□□□ 1.73
CTDSP1-207ENST00000473420 FBLN1P23142 703 aa25.85■■□□□ 1.73
CTDSP1-207ENST00000473420 TRPC5Q9UL62 973 aaPredicted RBP25.85■■□□□ 1.73
CTDSP1-207ENST00000473420 SMG6Q86US8 1419 aaKnown RBP25.85■■□□□ 1.73
CTDSP1-207ENST00000473420 RRS1Q15050 365 aaKnown RBP25.84■■□□□ 1.73
CTDSP1-207ENST00000473420 IP6K1Q92551 441 aa25.84■■□□□ 1.73
CTDSP1-207ENST00000473420 AXIN2Q9Y2T1 843 aa25.83■■□□□ 1.73
CTDSP1-207ENST00000473420 FLT4P35916 1363 aa25.82■■□□□ 1.72
CTDSP1-207ENST00000473420 HOXC9P31274 260 aa25.82■■□□□ 1.72
CTDSP1-207ENST00000473420 AMPHP49418 695 aa25.82■■□□□ 1.72
CTDSP1-207ENST00000473420 VPS72Q15906 364 aa25.82■■□□□ 1.72
CTDSP1-207ENST00000473420 QTRT2Q9H974 415 aaKnown RBP25.82■■□□□ 1.72
CTDSP1-207ENST00000473420 TNNT2P45379 298 aaPredicted RBP25.81■■□□□ 1.72
CTDSP1-207ENST00000473420 POLKQ9UBT6 870 aa25.81■■□□□ 1.72
CTDSP1-207ENST00000473420 EMILIN1Q9Y6C2 1016 aa25.8■■□□□ 1.72
CTDSP1-207ENST00000473420 GLI3P10071 1580 aa25.79■■□□□ 1.72
CTDSP1-207ENST00000473420 EVA1CP58658 441 aa25.79■■□□□ 1.72
CTDSP1-207ENST00000473420 POTEAQ6S8J7 498 aa25.79■■□□□ 1.72
CTDSP1-207ENST00000473420 STRN4Q9NRL3 753 aa25.78■■□□□ 1.72
CTDSP1-207ENST00000473420 WDR17Q8IZU2 1322 aa25.78■■□□□ 1.72
CTDSP1-207ENST00000473420 INSRP06213 1382 aa25.78■■□□□ 1.72
CTDSP1-207ENST00000473420 CRB1P82279 1406 aa25.78■■□□□ 1.72
CTDSP1-207ENST00000473420 CDK12Q9NYV4 1490 aaPredicted RBP25.78■■□□□ 1.72
CTDSP1-207ENST00000473420 ERBB3P21860 1342 aa25.77■■□□□ 1.72
CTDSP1-207ENST00000473420 GJD4Q96KN9 370 aaPredicted RBP25.76■■□□□ 1.71
CTDSP1-207ENST00000473420 PARD3Q8TEW0 1356 aa25.76■■□□□ 1.71
CTDSP1-207ENST00000473420 SPATA31A5Q5VU36 1347 aa25.75■■□□□ 1.71
CTDSP1-207ENST00000473420 SPATA31A7Q8IWB4 1347 aa25.75■■□□□ 1.71
CTDSP1-207ENST00000473420 RBM6P78332 1123 aaKnown RBP25.75■■□□□ 1.71
CTDSP1-207ENST00000473420 WNK3Q9BYP7 1800 aa25.74■■□□□ 1.71
CTDSP1-207ENST00000473420 LARP1Q6PKG0 1096 aaKnown RBP25.74■■□□□ 1.71
CTDSP1-207ENST00000473420 ANKRD24Q8TF21 1146 aa25.74■■□□□ 1.71
CTDSP1-207ENST00000473420 SPATA31A1Q5TZJ5 1347 aa25.73■■□□□ 1.71
CTDSP1-207ENST00000473420 RXRBP28702 533 aa25.73■■□□□ 1.71
CTDSP1-207ENST00000473420 CNGB1Q14028 1251 aaPredicted RBP25.73■■□□□ 1.71
CTDSP1-207ENST00000473420 PPM1GO15355 546 aaPredicted RBP25.72■■□□□ 1.71
CTDSP1-207ENST00000473420 HSP90AB2PQ58FF8 381 aa25.72■■□□□ 1.71
CTDSP1-207ENST00000473420 CCDC9Q9Y3X0 531 aaKnown RBP25.72■■□□□ 1.71
CTDSP1-207ENST00000473420 RGPD2P0DJD1 1756 aa25.72■■□□□ 1.71
CTDSP1-207ENST00000473420 CSB-PGBD3P0DP91 1061 aa25.71■■□□□ 1.71
CTDSP1-207ENST00000473420 RALBP1Q15311 655 aa25.7■■□□□ 1.7
CTDSP1-207ENST00000473420 TOM1L2Q6ZVM7 507 aa25.7■■□□□ 1.7
CTDSP1-207ENST00000473420 CARD10Q9BWT7 1032 aa25.69■■□□□ 1.7
CTDSP1-207ENST00000473420 THRAP3Q9Y2W1 955 aaKnown RBP25.69■■□□□ 1.7
CTDSP1-207ENST00000473420 THSD7AQ9UPZ6 1657 aa25.68■■□□□ 1.7
CTDSP1-207ENST00000473420 MTHFSP49914 203 aa25.68■■□□□ 1.7
CTDSP1-207ENST00000473420 PPP2R1AP30153 589 aa25.67■■□□□ 1.7
CTDSP1-207ENST00000473420 BARGINQ6ZT62 677 aa25.66■■□□□ 1.7
CTDSP1-207ENST00000473420 TCP11L2Q8N4U5 519 aa25.66■■□□□ 1.7
CTDSP1-207ENST00000473420 LTV1Q96GA3 475 aaPredicted RBP25.66■■□□□ 1.7
CTDSP1-207ENST00000473420 ONECUT3O60422 494 aaPredicted RBP25.65■■□□□ 1.7
CTDSP1-207ENST00000473420 PARP4Q9UKK3 1724 aaKnown RBP25.65■■□□□ 1.7
CTDSP1-207ENST00000473420 NLRP2Q9NX02 1062 aa25.64■■□□□ 1.7
CTDSP1-207ENST00000473420 RGS12O14924 1447 aa25.63■■□□□ 1.69
CTDSP1-207ENST00000473420 USP35Q9P2H5 1018 aa25.63■■□□□ 1.69
CTDSP1-207ENST00000473420 COL3A1P02461 1466 aaPredicted RBP25.63■■□□□ 1.69
CTDSP1-207ENST00000473420 RGPD1P0DJD0 1748 aa25.63■■□□□ 1.69
CTDSP1-207ENST00000473420 NCAPD2Q15021 1401 aa25.63■■□□□ 1.69
CTDSP1-207ENST00000473420 EIF4A2Q14240 407 aaKnown RBP25.62■■□□□ 1.69
CTDSP1-207ENST00000473420 PRKRIP1Q9H875 184 aaPredicted RBP25.62■■□□□ 1.69
CTDSP1-207ENST00000473420 FAM98CQ17RN3 349 aaKnown RBP25.61■■□□□ 1.69
CTDSP1-207ENST00000473420 BRWD3Q6RI45 1802 aa25.6■■□□□ 1.69
CTDSP1-207ENST00000473420 DISP2A7MBM2 1401 aa25.6■■□□□ 1.69
CTDSP1-207ENST00000473420 MYBBP1AQ9BQG0 1328 aaKnown RBP25.6■■□□□ 1.69
CTDSP1-207ENST00000473420 NBPF6Q5VWK0 638 aa25.59■■□□□ 1.69
CTDSP1-207ENST00000473420 NBPF4Q96M43 638 aa25.59■■□□□ 1.69
CTDSP1-207ENST00000473420 CFAP53Q96M91 514 aa25.59■■□□□ 1.69
CTDSP1-207ENST00000473420 CDCA7Q9BWT1 371 aaPredicted RBP25.59■■□□□ 1.69
CTDSP1-207ENST00000473420 LRRC37A3O60309 1634 aa25.58■■□□□ 1.69
CTDSP1-207ENST00000473420 IL13P35225 146 aa25.56■■□□□ 1.68
CTDSP1-207ENST00000473420 EYA1Q99502 592 aa25.56■■□□□ 1.68
CTDSP1-207ENST00000473420 IGSF1Q8N6C5 1336 aa25.56■■□□□ 1.68
CTDSP1-207ENST00000473420 DIAPH1O60610 1272 aaKnown RBP25.55■■□□□ 1.68
CTDSP1-207ENST00000473420 SEPT12Q8IYM1 358 aa25.55■■□□□ 1.68
CTDSP1-207ENST00000473420 ANP32CO43423 234 aa25.53■■□□□ 1.68
CTDSP1-207ENST00000473420 IL2RBP14784 551 aa25.53■■□□□ 1.68
CTDSP1-207ENST00000473420 A0A0G2JS52 829 aa25.52■■□□□ 1.68
CTDSP1-207ENST00000473420 MYT1Q01538 1121 aa25.52■■□□□ 1.68
CTDSP1-207ENST00000473420 USHBP1Q8N6Y0 703 aa25.52■■□□□ 1.68
CTDSP1-207ENST00000473420 PLEKHG2Q9H7P9 1386 aa25.52■■□□□ 1.68
CTDSP1-207ENST00000473420 MEGF6O75095 1541 aa25.5■■□□□ 1.67
CTDSP1-207ENST00000473420 TNS2Q63HR2 1409 aa25.5■■□□□ 1.67
CTDSP1-207ENST00000473420 ILDR2Q71H61 639 aa25.5■■□□□ 1.67
CTDSP1-207ENST00000473420 PKD1L3Q7Z443 1732 aa25.49■■□□□ 1.67
CTDSP1-207ENST00000473420 OVOS2A0A0G2JMS6 1433 aa25.49■■□□□ 1.67
CTDSP1-207ENST00000473420 KDRP35968 1356 aa25.49■■□□□ 1.67
CTDSP1-207ENST00000473420 RAPGEF4Q8WZA2 1011 aa25.48■■□□□ 1.67
CTDSP1-207ENST00000473420 SHANK3Q9BYB0 1731 aa25.48■■□□□ 1.67
CTDSP1-207ENST00000473420 DDB1Q16531 1140 aa25.47■■□□□ 1.67
CTDSP1-207ENST00000473420 NUDCQ9Y266 331 aa25.47■■□□□ 1.67
CTDSP1-207ENST00000473420 TATP17735 454 aaPredicted RBP25.46■■□□□ 1.67
CTDSP1-207ENST00000473420 EXOC5O00471 708 aa25.45■■□□□ 1.66
CTDSP1-207ENST00000473420 KRT27Q7Z3Y8 459 aa25.45■■□□□ 1.66
CTDSP1-207ENST00000473420 PDE3BQ13370 1112 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 121.6 ms