RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.62■■□□□ 1.05
VTI1A-203ENST00000472892 WDR17Q8IZU2 1322 aa21.61■■□□□ 1.05
VTI1A-203ENST00000472892 ST20-MTHFSA0A0A6YYL1 179 aa21.61■■□□□ 1.05
VTI1A-203ENST00000472892 SOX12O15370 315 aa21.61■■□□□ 1.05
VTI1A-203ENST00000472892 HDGFL2Q7Z4V5 671 aaPredicted RBP21.61■■□□□ 1.05
VTI1A-203ENST00000472892 CAMKK2Q96RR4 588 aa21.61■■□□□ 1.05
VTI1A-203ENST00000472892 SLC24A1O60721 1099 aa21.6■■□□□ 1.05
VTI1A-203ENST00000472892 MON2Q7Z3U7 1717 aa21.6■■□□□ 1.05
VTI1A-203ENST00000472892 C11orf95C9JLR9 678 aaPredicted RBP21.59■■□□□ 1.05
VTI1A-203ENST00000472892 APBA3O96018 575 aa21.59■■□□□ 1.05
VTI1A-203ENST00000472892 EZH2Q15910 746 aaKnown RBP21.59■■□□□ 1.05
VTI1A-203ENST00000472892 NME9Q86XW9 330 aa21.59■■□□□ 1.05
VTI1A-203ENST00000472892 TNS1Q9HBL0 1735 aaKnown RBP21.59■■□□□ 1.05
VTI1A-203ENST00000472892 TERF2IPQ9NYB0 399 aa21.59■■□□□ 1.05
VTI1A-203ENST00000472892 NFAT5O94916 1531 aa21.59■■□□□ 1.05
VTI1A-203ENST00000472892 CARD10Q9BWT7 1032 aa21.57■■□□□ 1.04
VTI1A-203ENST00000472892 PARP4Q9UKK3 1724 aaKnown RBP21.57■■□□□ 1.04
VTI1A-203ENST00000472892 PSDA5PKW4 1024 aaPredicted RBP21.56■■□□□ 1.04
VTI1A-203ENST00000472892 DDB1Q16531 1140 aa21.56■■□□□ 1.04
VTI1A-203ENST00000472892 CDCA7Q9BWT1 371 aaPredicted RBP21.56■■□□□ 1.04
VTI1A-203ENST00000472892 EDC4Q6P2E9 1401 aaKnown RBP21.55■■□□□ 1.04
VTI1A-203ENST00000472892 A0A1W2PP64 1363 aa21.55■■□□□ 1.04
VTI1A-203ENST00000472892 PARD3Q8TEW0 1356 aa21.55■■□□□ 1.04
VTI1A-203ENST00000472892 CSB-PGBD3P0DP91 1061 aa21.54■■□□□ 1.04
VTI1A-203ENST00000472892 NINLQ9Y2I6 1382 aa21.53■■□□□ 1.04
VTI1A-203ENST00000472892 ABCC6O95255 1503 aa21.53■■□□□ 1.04
VTI1A-203ENST00000472892 USP54Q70EL1 1684 aa21.53■■□□□ 1.04
VTI1A-203ENST00000472892 R3HDM1Q15032 1099 aaKnown RBP21.51■■□□□ 1.03
VTI1A-203ENST00000472892 OVOS2A0A0G2JMS6 1433 aa21.51■■□□□ 1.03
VTI1A-203ENST00000472892 OVOS2A0A0J9YW53 1432 aa21.51■■□□□ 1.03
VTI1A-203ENST00000472892 OVOS2Q6IE36 1432 aa21.51■■□□□ 1.03
VTI1A-203ENST00000472892 RGPD5Q99666 1765 aa21.51■■□□□ 1.03
VTI1A-203ENST00000472892 MARCH10Q8NA82 808 aaPredicted RBP21.5■■□□□ 1.03
VTI1A-203ENST00000472892 TIMELESSQ9UNS1 1208 aa21.5■■□□□ 1.03
VTI1A-203ENST00000472892 CCDC7Q96M83 1385 aa21.49■■□□□ 1.03
VTI1A-203ENST00000472892 PEAK1Q9H792 1746 aa21.49■■□□□ 1.03
VTI1A-203ENST00000472892 LRRC37A3O60309 1634 aa21.49■■□□□ 1.03
VTI1A-203ENST00000472892 EXOC5O00471 708 aa21.48■■□□□ 1.03
VTI1A-203ENST00000472892 ERBB3P21860 1342 aa21.48■■□□□ 1.03
VTI1A-203ENST00000472892 BCL9O00512 1426 aa21.47■■□□□ 1.03
VTI1A-203ENST00000472892 USP47Q96K76 1375 aa21.47■■□□□ 1.03
VTI1A-203ENST00000472892 TMF1P82094 1093 aa21.46■■□□□ 1.03
VTI1A-203ENST00000472892 BCL11BQ9C0K0 894 aaPredicted RBP21.46■■□□□ 1.03
VTI1A-203ENST00000472892 LRP5O75197 1615 aa21.45■■□□□ 1.02
VTI1A-203ENST00000472892 PLSCR1O15162 318 aa21.45■■□□□ 1.02
VTI1A-203ENST00000472892 MAPK8IP2Q13387 824 aaPredicted RBP21.45■■□□□ 1.02
VTI1A-203ENST00000472892 NLRP2Q9NX02 1062 aa21.45■■□□□ 1.02
VTI1A-203ENST00000472892 CLSPNQ9HAW4 1339 aa21.45■■□□□ 1.02
VTI1A-203ENST00000472892 WNK3Q9BYP7 1800 aa21.45■■□□□ 1.02
VTI1A-203ENST00000472892 ANKRD24Q8TF21 1146 aa21.44■■□□□ 1.02
VTI1A-203ENST00000472892 ANKRD36BQ8N2N9 1353 aa21.44■■□□□ 1.02
VTI1A-203ENST00000472892 NBPF14Q5TI25 921 aa21.43■■□□□ 1.02
VTI1A-203ENST00000472892 PTF1AQ7RTS3 328 aa21.43■■□□□ 1.02
VTI1A-203ENST00000472892 IP6K1Q92551 441 aa21.43■■□□□ 1.02
VTI1A-203ENST00000472892 COG3Q96JB2 828 aa21.43■■□□□ 1.02
VTI1A-203ENST00000472892 RREB1Q92766 1687 aa21.42■■□□□ 1.02
VTI1A-203ENST00000472892 LTN1O94822 1766 aa21.41■■□□□ 1.02
VTI1A-203ENST00000472892 PCGF6Q9BYE7 350 aa21.41■■□□□ 1.02
VTI1A-203ENST00000472892 SBF2Q86WG5 1849 aa21.41■■□□□ 1.02
VTI1A-203ENST00000472892 IL2RBP14784 551 aa21.4■■□□□ 1.02
VTI1A-203ENST00000472892 CDCA8Q53HL2 280 aa21.4■■□□□ 1.02
VTI1A-203ENST00000472892 TNS2Q63HR2 1409 aa21.38■■□□□ 1.01
VTI1A-203ENST00000472892 NUP188Q5SRE5 1749 aa21.38■■□□□ 1.01
VTI1A-203ENST00000472892 FYB1O15117 783 aa21.38■■□□□ 1.01
VTI1A-203ENST00000472892 MAP3K19Q56UN5 1328 aa21.37■■□□□ 1.01
VTI1A-203ENST00000472892 FBLN1P23142 703 aa21.37■■□□□ 1.01
VTI1A-203ENST00000472892 PROM2Q8N271 834 aa21.37■■□□□ 1.01
VTI1A-203ENST00000472892 HOXC9P31274 260 aa21.35■■□□□ 1.01
VTI1A-203ENST00000472892 RGPD3A6NKT7 1758 aaPredicted RBP21.34■■□□□ 1.01
VTI1A-203ENST00000472892 RGPD4Q7Z3J3 1758 aa21.34■■□□□ 1.01
VTI1A-203ENST00000472892 KCNQ2O43526 872 aa21.34■■□□□ 1.01
VTI1A-203ENST00000472892 AMPHP49418 695 aa21.34■■□□□ 1.01
VTI1A-203ENST00000472892 LTV1Q96GA3 475 aaPredicted RBP21.34■■□□□ 1.01
VTI1A-203ENST00000472892 GGNBP2Q9H3C7 697 aa21.34■■□□□ 1.01
VTI1A-203ENST00000472892 CARD14Q9BXL6 1004 aa21.31■■□□□ 1
VTI1A-203ENST00000472892 RRS1Q15050 365 aaKnown RBP21.3■■□□□ 1
VTI1A-203ENST00000472892 TXNRD1Q16881 649 aa21.3■■□□□ 1
VTI1A-203ENST00000472892 PPP4R3CPQ6ZMV5 832 aa21.3■■□□□ 1
VTI1A-203ENST00000472892 RTL1A6NKG5 1358 aa21.29■■□□□ 1
VTI1A-203ENST00000472892 ACSBG1Q96GR2 724 aa21.29■■□□□ 1
VTI1A-203ENST00000472892 ANO8Q9HCE9 1232 aaPredicted RBP21.29■■□□□ 1
VTI1A-203ENST00000472892 FAM208AQ9UK61 1670 aaKnown RBP21.27■■□□□ 1
VTI1A-203ENST00000472892 DDX54Q8TDD1 881 aaKnown RBP21.26■□□□□ 0.99
VTI1A-203ENST00000472892 SPON1Q9HCB6 807 aa21.26■□□□□ 0.99
VTI1A-203ENST00000472892 NHSQ6T4R5 1651 aa21.25■□□□□ 0.99
VTI1A-203ENST00000472892 NBPF6Q5VWK0 638 aa21.25■□□□□ 0.99
VTI1A-203ENST00000472892 NBPF4Q96M43 638 aa21.25■□□□□ 0.99
VTI1A-203ENST00000472892 HSP90AB2PQ58FF8 381 aa21.23■□□□□ 0.99
VTI1A-203ENST00000472892 KIF24Q5T7B8 1368 aa21.23■□□□□ 0.99
VTI1A-203ENST00000472892 NSD3Q9BZ95 1437 aa21.22■□□□□ 0.99
VTI1A-203ENST00000472892 SLC15A2Q16348 729 aa21.22■□□□□ 0.99
VTI1A-203ENST00000472892 ZCRB1Q8TBF4 217 aaKnown RBP21.22■□□□□ 0.99
VTI1A-203ENST00000472892 CCER1Q8TC90 406 aaPredicted RBP21.22■□□□□ 0.99
VTI1A-203ENST00000472892 STK32BQ9NY57 414 aa21.22■□□□□ 0.99
VTI1A-203ENST00000472892 INSRP06213 1382 aa21.22■□□□□ 0.99
VTI1A-203ENST00000472892 MYOM1P52179 1685 aa21.21■□□□□ 0.99
VTI1A-203ENST00000472892 PDGFDQ9GZP0 370 aaPredicted RBP21.21■□□□□ 0.99
VTI1A-203ENST00000472892 CGNL1Q0VF96 1302 aa21.2■□□□□ 0.98
VTI1A-203ENST00000472892 FLT4P35916 1363 aa21.2■□□□□ 0.98
VTI1A-203ENST00000472892 EIF4G2P78344 907 aaKnown RBP eCLIP21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms