RNA–Protein interactions for RNA: ENST00000472806.1

CCDC171-205, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-205ENST00000472806 YEATS2Q9ULM3 1422 aa10.1□□□□□ -0.79
CCDC171-205ENST00000472806 QRICH2Q9H0J4 1663 aa10.1□□□□□ -0.79
CCDC171-205ENST00000472806 FOSBP53539 338 aa10.1□□□□□ -0.79
CCDC171-205ENST00000472806 IRX6P78412 446 aaPredicted RBP10.1□□□□□ -0.79
CCDC171-205ENST00000472806 MYT1Q01538 1121 aa10.1□□□□□ -0.79
CCDC171-205ENST00000472806 CADPS2Q86UW7 1296 aa10.1□□□□□ -0.79
CCDC171-205ENST00000472806 NINLQ9Y2I6 1382 aa10.1□□□□□ -0.79
CCDC171-205ENST00000472806 EVC2Q86UK5 1308 aa10.09□□□□□ -0.79
CCDC171-205ENST00000472806 PREX1Q8TCU6 1659 aa10.09□□□□□ -0.79
CCDC171-205ENST00000472806 PDE4AP27815 886 aa10.09□□□□□ -0.79
CCDC171-205ENST00000472806 SIGLEC1Q9BZZ2 1709 aa10.09□□□□□ -0.79
CCDC171-205ENST00000472806 EVI5O60447 810 aa10.08□□□□□ -0.8
CCDC171-205ENST00000472806 BCL2L12Q9HB09 334 aa10.08□□□□□ -0.8
CCDC171-205ENST00000472806 RCAN3Q9UKA8 241 aa10.08□□□□□ -0.8
CCDC171-205ENST00000472806 USP32Q8NFA0 1604 aa10.07□□□□□ -0.8
CCDC171-205ENST00000472806 NSD2O96028 1365 aa10.07□□□□□ -0.8
CCDC171-205ENST00000472806 ADAM33Q9BZ11 813 aa10.07□□□□□ -0.8
CCDC171-205ENST00000472806 ANO8Q9HCE9 1232 aaPredicted RBP10.07□□□□□ -0.8
CCDC171-205ENST00000472806 EMILIN3Q9NT22 766 aa10.07□□□□□ -0.8
CCDC171-205ENST00000472806 TRAK1Q9UPV9 953 aa10.07□□□□□ -0.8
CCDC171-205ENST00000472806 CFAP65Q6ZU64 1925 aaKnown RBP10.06□□□□□ -0.8
CCDC171-205ENST00000472806 PTPN5P54829 565 aa10.06□□□□□ -0.8
CCDC171-205ENST00000472806 RRP1P56182 461 aaKnown RBP10.06□□□□□ -0.8
CCDC171-205ENST00000472806 IDI1Q13907 227 aa10.06□□□□□ -0.8
CCDC171-205ENST00000472806 TMEM131LA2VDJ0 1609 aa10.06□□□□□ -0.8
CCDC171-205ENST00000472806 ARHGEF28Q8N1W1 1705 aaKnown RBP10.05□□□□□ -0.8
CCDC171-205ENST00000472806 CCDC136Q96JN2 1154 aa10.05□□□□□ -0.8
CCDC171-205ENST00000472806 RYDENQ9NUL5 291 aaKnown RBP10.05□□□□□ -0.8
CCDC171-205ENST00000472806 CGNL1Q0VF96 1302 aa10.05□□□□□ -0.8
CCDC171-205ENST00000472806 POLR3AO14802 1390 aaPredicted RBP10.04□□□□□ -0.8
CCDC171-205ENST00000472806 BHMG1C9JSJ3 638 aaPredicted RBP10.04□□□□□ -0.8
CCDC171-205ENST00000472806 DDX27Q96GQ7 796 aaKnown RBP10.04□□□□□ -0.8
CCDC171-205ENST00000472806 ZBED2Q9BTP6 218 aa10.04□□□□□ -0.8
CCDC171-205ENST00000472806 ADAMTS8Q9UP79 889 aa10.04□□□□□ -0.8
CCDC171-205ENST00000472806 NSD3Q9BZ95 1437 aa10.04□□□□□ -0.8
CCDC171-205ENST00000472806 ATAD2Q6PL18 1390 aa10.03□□□□□ -0.8
CCDC171-205ENST00000472806 ANKRD36BQ8N2N9 1353 aa10.03□□□□□ -0.8
CCDC171-205ENST00000472806 ARHGEF40Q8TER5 1519 aa10.03□□□□□ -0.8
CCDC171-205ENST00000472806 HDGFP51858 240 aaKnown RBP10.03□□□□□ -0.8
CCDC171-205ENST00000472806 MORC1Q86VD1 984 aa10.03□□□□□ -0.8
CCDC171-205ENST00000472806 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.03□□□□□ -0.8
CCDC171-205ENST00000472806 CFAP53Q96M91 514 aa10.03□□□□□ -0.8
CCDC171-205ENST00000472806 ESF1Q9H501 851 aaKnown RBP10.03□□□□□ -0.8
CCDC171-205ENST00000472806 SPATA31D1Q6ZQQ2 1576 aa10.02□□□□□ -0.81
CCDC171-205ENST00000472806 MFSD10Q14728 455 aa10.02□□□□□ -0.81
CCDC171-205ENST00000472806 TMEM132EQ6IEE7 984 aa10.02□□□□□ -0.81
CCDC171-205ENST00000472806 B4GALNT3Q6L9W6 998 aa10.02□□□□□ -0.81
CCDC171-205ENST00000472806 CARD14Q9BXL6 1004 aa10.02□□□□□ -0.81
CCDC171-205ENST00000472806 RBM19Q9Y4C8 960 aaKnown RBP10.02□□□□□ -0.81
CCDC171-205ENST00000472806 TSPOAP1O95153 1857 aa10.02□□□□□ -0.81
CCDC171-205ENST00000472806 PTPREP23469 700 aa10.01□□□□□ -0.81
CCDC171-205ENST00000472806 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.01□□□□□ -0.81
CCDC171-205ENST00000472806 SALL2Q9Y467 1007 aaPredicted RBP10.01□□□□□ -0.81
CCDC171-205ENST00000472806 CLTCQ00610 1675 aaKnown RBP10□□□□□ -0.81
CCDC171-205ENST00000472806 MAP3K9P80192 1104 aa10□□□□□ -0.81
CCDC171-205ENST00000472806 ZDHHC16Q969W1 377 aa10□□□□□ -0.81
CCDC171-205ENST00000472806 DLC1Q96QB1 1528 aa10□□□□□ -0.81
CCDC171-205ENST00000472806 TULP4Q9NRJ4 1543 aa10□□□□□ -0.81
CCDC171-205ENST00000472806 YTHDC2Q9H6S0 1430 aaKnown RBP9.99□□□□□ -0.81
CCDC171-205ENST00000472806 SLC12A5Q9H2X9 1139 aa9.99□□□□□ -0.81
CCDC171-205ENST00000472806 TERF2IPQ9NYB0 399 aa9.99□□□□□ -0.81
CCDC171-205ENST00000472806 POGKQ9P215 609 aa9.99□□□□□ -0.81
CCDC171-205ENST00000472806 ZNF521Q96K83 1311 aa9.99□□□□□ -0.81
CCDC171-205ENST00000472806 ALKQ9UM73 1620 aa9.98□□□□□ -0.81
CCDC171-205ENST00000472806 E9PSI1 815 aa9.98□□□□□ -0.81
CCDC171-205ENST00000472806 COL9A1P20849 921 aa9.98□□□□□ -0.81
CCDC171-205ENST00000472806 SRPK2P78362 688 aaKnown RBP9.98□□□□□ -0.81
CCDC171-205ENST00000472806 PROX2Q3B8N5 592 aa9.98□□□□□ -0.81
CCDC171-205ENST00000472806 SLC4A5Q9BY07 1137 aa9.98□□□□□ -0.81
CCDC171-205ENST00000472806 PCDHGA10Q9Y5H3 936 aa9.98□□□□□ -0.81
CCDC171-205ENST00000472806 FANCIQ9NVI1 1328 aa9.98□□□□□ -0.81
CCDC171-205ENST00000472806 MYO5BQ9ULV0 1848 aa9.98□□□□□ -0.81
CCDC171-205ENST00000472806 MED14O60244 1454 aa9.98□□□□□ -0.81
CCDC171-205ENST00000472806 PTPRMP28827 1452 aa9.98□□□□□ -0.81
CCDC171-205ENST00000472806 HDGFL2Q7Z4V5 671 aaPredicted RBP9.97□□□□□ -0.81
CCDC171-205ENST00000472806 CDCA7LQ96GN5 454 aa9.97□□□□□ -0.81
CCDC171-205ENST00000472806 RIMS2Q9UQ26 1411 aa9.97□□□□□ -0.81
CCDC171-205ENST00000472806 A2ML1A8K2U0 1454 aa9.97□□□□□ -0.81
CCDC171-205ENST00000472806 KIF13AQ9H1H9 1805 aa9.96□□□□□ -0.81
CCDC171-205ENST00000472806 SLFN5Q08AF3 891 aa9.96□□□□□ -0.82
CCDC171-205ENST00000472806 NUTM2DQ5VT03 806 aaPredicted RBP9.96□□□□□ -0.82
CCDC171-205ENST00000472806 FBXO31Q5XUX0 539 aaPredicted RBP9.96□□□□□ -0.82
CCDC171-205ENST00000472806 THSD4Q6ZMP0 1018 aa9.96□□□□□ -0.82
CCDC171-205ENST00000472806 RUNDC1Q96C34 613 aa9.96□□□□□ -0.82
CCDC171-205ENST00000472806 ABCC11Q96J66 1382 aa9.96□□□□□ -0.82
CCDC171-205ENST00000472806 PLEKHH1Q9ULM0 1364 aa9.96□□□□□ -0.82
CCDC171-205ENST00000472806 DUSP27Q5VZP5 1158 aa9.95□□□□□ -0.82
CCDC171-205ENST00000472806 PRAM1Q96QH2 718 aa9.95□□□□□ -0.82
CCDC171-205ENST00000472806 PNNQ9H307 717 aaKnown RBP9.95□□□□□ -0.82
CCDC171-205ENST00000472806 STK26Q9P289 416 aa9.95□□□□□ -0.82
CCDC171-205ENST00000472806 NKTRP30414 1462 aaKnown RBP9.95□□□□□ -0.82
CCDC171-205ENST00000472806 SENP3-EIF4A1A0A087X0R7 540 aa9.94□□□□□ -0.82
CCDC171-205ENST00000472806 APAF1O14727 1248 aa9.94□□□□□ -0.82
CCDC171-205ENST00000472806 TRMT2AQ8IZ69 625 aaKnown RBP9.94□□□□□ -0.82
CCDC171-205ENST00000472806 WNT2BQ93097 391 aa9.94□□□□□ -0.82
CCDC171-205ENST00000472806 SIRT1Q96EB6 747 aa9.94□□□□□ -0.82
CCDC171-205ENST00000472806 ZMYM3Q14202 1370 aa9.93□□□□□ -0.82
CCDC171-205ENST00000472806 TCERG1O14776 1098 aaKnown RBP9.93□□□□□ -0.82
CCDC171-205ENST00000472806 CCDC27Q2M243 656 aa9.93□□□□□ -0.82
CCDC171-205ENST00000472806 CCDC146Q8IYE0 955 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms