RNA–Protein interactions for RNA: ENST00000472749.6

ZIC4-208, Transcript of Zic family member 4, humanhuman

TSL 2

Gene ZIC4, Length 3,550 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4-208ENST00000472749 MIS18AQ9NYP9 233 aa11.99□□□□□ -0.49
ZIC4-208ENST00000472749 DDX19BQ9UMR2 479 aa11.99□□□□□ -0.49
ZIC4-208ENST00000472749 TERF1P54274 439 aa11.99□□□□□ -0.49
ZIC4-208ENST00000472749 FOXD4L6Q3SYB3 417 aaPredicted RBP11.99□□□□□ -0.49
ZIC4-208ENST00000472749 FOXD4L3Q6VB84 417 aaPredicted RBP11.99□□□□□ -0.49
ZIC4-208ENST00000472749 ZBTB9Q96C00 473 aa11.99□□□□□ -0.49
ZIC4-208ENST00000472749 TBC1D32Q96NH3 1257 aa11.99□□□□□ -0.49
ZIC4-208ENST00000472749 LMOD2Q6P5Q4 547 aa11.98□□□□□ -0.49
ZIC4-208ENST00000472749 ISY1Q9ULR0 285 aaKnown RBP11.98□□□□□ -0.49
ZIC4-208ENST00000472749 NME9Q86XW9 330 aa11.98□□□□□ -0.49
ZIC4-208ENST00000472749 NINLQ9Y2I6 1382 aa11.97□□□□□ -0.49
ZIC4-208ENST00000472749 FYB1O15117 783 aa11.97□□□□□ -0.49
ZIC4-208ENST00000472749 PTMAP06454 111 aaKnown RBP11.97□□□□□ -0.49
ZIC4-208ENST00000472749 MYOM1P52179 1685 aa11.97□□□□□ -0.49
ZIC4-208ENST00000472749 HAP1P54257 671 aaPredicted RBP11.97□□□□□ -0.49
ZIC4-208ENST00000472749 SASS6Q6UVJ0 657 aa11.97□□□□□ -0.49
ZIC4-208ENST00000472749 HOMEZQ8IX15 550 aa11.97□□□□□ -0.49
ZIC4-208ENST00000472749 CD109Q6YHK3 1445 aa11.97□□□□□ -0.49
ZIC4-208ENST00000472749 IRX3P78415 501 aaPredicted RBP11.97□□□□□ -0.49
ZIC4-208ENST00000472749 ATP2B3Q16720 1220 aa11.97□□□□□ -0.49
ZIC4-208ENST00000472749 ASXL2Q76L83 1435 aa11.96□□□□□ -0.49
ZIC4-208ENST00000472749 CLASP1Q7Z460 1538 aa11.96□□□□□ -0.49
ZIC4-208ENST00000472749 DDX49Q9Y6V7 483 aaKnown RBP11.96□□□□□ -0.5
ZIC4-208ENST00000472749 CEP152O94986 1710 aa11.96□□□□□ -0.5
ZIC4-208ENST00000472749 ABCA6Q8N139 1617 aa11.96□□□□□ -0.5
ZIC4-208ENST00000472749 MAP3K4Q9Y6R4 1608 aa11.95□□□□□ -0.5
ZIC4-208ENST00000472749 PHACTR3Q96KR7 559 aa11.95□□□□□ -0.5
ZIC4-208ENST00000472749 TRERF1Q96PN7 1200 aa11.95□□□□□ -0.5
ZIC4-208ENST00000472749 GBP4Q96PP9 640 aa11.95□□□□□ -0.5
ZIC4-208ENST00000472749 PHF23Q9BUL5 403 aaPredicted RBP11.95□□□□□ -0.5
ZIC4-208ENST00000472749 TET3O43151 1660 aa11.95□□□□□ -0.5
ZIC4-208ENST00000472749 COG3Q96JB2 828 aa11.95□□□□□ -0.5
ZIC4-208ENST00000472749 CSPP1Q1MSJ5 1256 aa11.94□□□□□ -0.5
ZIC4-208ENST00000472749 TSPYL6Q8N831 410 aa11.94□□□□□ -0.5
ZIC4-208ENST00000472749 TNPO1Q92973 898 aaKnown RBP11.94□□□□□ -0.5
ZIC4-208ENST00000472749 NPATQ14207 1427 aa11.94□□□□□ -0.5
ZIC4-208ENST00000472749 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.94□□□□□ -0.5
ZIC4-208ENST00000472749 CCDC27Q2M243 656 aa11.94□□□□□ -0.5
ZIC4-208ENST00000472749 KRT24Q2M2I5 525 aa11.94□□□□□ -0.5
ZIC4-208ENST00000472749 SHROOM2Q13796 1616 aa11.94□□□□□ -0.5
ZIC4-208ENST00000472749 TRIM35Q9UPQ4 493 aa11.94□□□□□ -0.5
ZIC4-208ENST00000472749 PPP1R9BQ96SB3 815 aa11.93□□□□□ -0.5
ZIC4-208ENST00000472749 SBNO2Q9Y2G9 1366 aa11.93□□□□□ -0.5
ZIC4-208ENST00000472749 MYOM2P54296 1465 aa11.93□□□□□ -0.5
ZIC4-208ENST00000472749 SULT6B1Q6IMI4 303 aa11.93□□□□□ -0.5
ZIC4-208ENST00000472749 MCM10Q7L590 875 aa11.93□□□□□ -0.5
ZIC4-208ENST00000472749 TWISTNBQ3B726 338 aaPredicted RBP11.92□□□□□ -0.5
ZIC4-208ENST00000472749 CHMP4CQ96CF2 233 aa11.92□□□□□ -0.5
ZIC4-208ENST00000472749 SLC26A8Q96RN1 970 aa11.92□□□□□ -0.5
ZIC4-208ENST00000472749 NOL7Q9UMY1 257 aaKnown RBP11.92□□□□□ -0.5
ZIC4-208ENST00000472749 IRX5P78411 483 aaPredicted RBP11.92□□□□□ -0.5
ZIC4-208ENST00000472749 A0A1W2PP64 1363 aa11.92□□□□□ -0.5
ZIC4-208ENST00000472749 ANKRD36BQ8N2N9 1353 aa11.92□□□□□ -0.5
ZIC4-208ENST00000472749 UHRF1BP1LA0JNW5 1464 aa11.91□□□□□ -0.5
ZIC4-208ENST00000472749 RBM33Q96EV2 1170 aaKnown RBP11.91□□□□□ -0.5
ZIC4-208ENST00000472749 RBM42Q9BTD8 480 aaKnown RBP11.91□□□□□ -0.5
ZIC4-208ENST00000472749 KIF1BO60333 1816 aa11.91□□□□□ -0.5
ZIC4-208ENST00000472749 ZNF518AQ6AHZ1 1483 aa11.91□□□□□ -0.5
ZIC4-208ENST00000472749 ATAD2Q6PL18 1390 aa11.91□□□□□ -0.5
ZIC4-208ENST00000472749 SMARCA5O60264 1052 aaPredicted RBP11.91□□□□□ -0.5
ZIC4-208ENST00000472749 GOLGA6L22H0YM25 854 aa11.9□□□□□ -0.5
ZIC4-208ENST00000472749 TAF3Q5VWG9 929 aa11.9□□□□□ -0.5
ZIC4-208ENST00000472749 RTF1Q92541 710 aaKnown RBP11.9□□□□□ -0.5
ZIC4-208ENST00000472749 SKOR2Q2VWA4 1001 aaPredicted RBP11.9□□□□□ -0.5
ZIC4-208ENST00000472749 RPGRIP1LQ68CZ1 1315 aa11.9□□□□□ -0.5
ZIC4-208ENST00000472749 CAVIN1Q6NZI2 390 aaKnown RBP11.9□□□□□ -0.5
ZIC4-208ENST00000472749 KIF16BQ96L93 1317 aa11.89□□□□□ -0.51
ZIC4-208ENST00000472749 U2AF2P26368 475 aaKnown RBP eCLIP11.89□□□□□ -0.51
ZIC4-208ENST00000472749 CHD1LQ86WJ1 897 aa11.89□□□□□ -0.51
ZIC4-208ENST00000472749 RNF214Q8ND24 703 aa11.89□□□□□ -0.51
ZIC4-208ENST00000472749 NGDNQ8NEJ9 315 aaKnown RBP11.89□□□□□ -0.51
ZIC4-208ENST00000472749 ZKSCAN5Q9Y2L8 839 aa11.89□□□□□ -0.51
ZIC4-208ENST00000472749 ZNF500O60304 480 aaPredicted RBP11.89□□□□□ -0.51
ZIC4-208ENST00000472749 PLEKHF1Q96S99 279 aa11.89□□□□□ -0.51
ZIC4-208ENST00000472749 EFCAB6Q5THR3 1501 aa11.89□□□□□ -0.51
ZIC4-208ENST00000472749 BRD2P25440 801 aaKnown RBP11.89□□□□□ -0.51
ZIC4-208ENST00000472749 PDCL2Q8N4E4 241 aa11.89□□□□□ -0.51
ZIC4-208ENST00000472749 TRIM6-TRIM34B2RNG4 842 aa11.88□□□□□ -0.51
ZIC4-208ENST00000472749 AMPHP49418 695 aa11.88□□□□□ -0.51
ZIC4-208ENST00000472749 TEX2Q8IWB9 1127 aa11.88□□□□□ -0.51
ZIC4-208ENST00000472749 C16orf71Q8IYS4 520 aaPredicted RBP11.88□□□□□ -0.51
ZIC4-208ENST00000472749 ZBTB40Q9NUA8 1239 aa11.88□□□□□ -0.51
ZIC4-208ENST00000472749 ERICH4A6NGS2 130 aa11.88□□□□□ -0.51
ZIC4-208ENST00000472749 HDAC1Q13547 482 aaPredicted RBP11.88□□□□□ -0.51
ZIC4-208ENST00000472749 TSHZ3Q63HK5 1081 aa11.88□□□□□ -0.51
ZIC4-208ENST00000472749 TRIM34Q9BYJ4 488 aa11.88□□□□□ -0.51
ZIC4-208ENST00000472749 ZNF710Q8N1W2 664 aa11.87□□□□□ -0.51
ZIC4-208ENST00000472749 RILPL2Q969X0 211 aa11.87□□□□□ -0.51
ZIC4-208ENST00000472749 SLC52A1Q9NWF4 448 aa11.87□□□□□ -0.51
ZIC4-208ENST00000472749 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.87□□□□□ -0.51
ZIC4-208ENST00000472749 POLKQ9UBT6 870 aa11.87□□□□□ -0.51
ZIC4-208ENST00000472749 C8orf58Q8NAV2 365 aa11.87□□□□□ -0.51
ZIC4-208ENST00000472749 PPRC1Q5VV67 1664 aaKnown RBP11.87□□□□□ -0.51
ZIC4-208ENST00000472749 F6X3S4 739 aa11.87□□□□□ -0.51
ZIC4-208ENST00000472749 CT47B1P0C2W7 299 aaPredicted RBP11.87□□□□□ -0.51
ZIC4-208ENST00000472749 GNAI1P63096 354 aa11.87□□□□□ -0.51
ZIC4-208ENST00000472749 SMC5Q8IY18 1101 aa11.87□□□□□ -0.51
ZIC4-208ENST00000472749 MROH2AA6NES4 1674 aa11.86□□□□□ -0.51
ZIC4-208ENST00000472749 MBIPQ9NS73 344 aa11.86□□□□□ -0.51
ZIC4-208ENST00000472749 DEPDC5O75140 1603 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms