RNA–Protein interactions for RNA: ENST00000472729.1

COMMD1-208, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 629 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-208ENST00000472729 FAM182BQ5T319 152 aa27.05■■□□□ 1.92
COMMD1-208ENST00000472729 AXIN2Q9Y2T1 843 aa27.05■■□□□ 1.92
COMMD1-208ENST00000472729 BAG6P46379 1132 aa27.04■■□□□ 1.92
COMMD1-208ENST00000472729 WDR17Q8IZU2 1322 aa27.03■■□□□ 1.92
COMMD1-208ENST00000472729 ANKRD36BQ8N2N9 1353 aa27.02■■□□□ 1.92
COMMD1-208ENST00000472729 EIF4G2P78344 907 aaKnown RBP eCLIP27.02■■□□□ 1.92
COMMD1-208ENST00000472729 POLR3GLQ9BT43 218 aa27.02■■□□□ 1.92
COMMD1-208ENST00000472729 AKAP12Q02952 1782 aa27.02■■□□□ 1.92
COMMD1-208ENST00000472729 DEFB132Q7Z7B7 95 aa27.01■■□□□ 1.91
COMMD1-208ENST00000472729 CDCA7Q9BWT1 371 aaPredicted RBP27■■□□□ 1.91
COMMD1-208ENST00000472729 C11orf95C9JLR9 678 aaPredicted RBP26.98■■□□□ 1.91
COMMD1-208ENST00000472729 DDB1Q16531 1140 aa26.98■■□□□ 1.91
COMMD1-208ENST00000472729 CARD10Q9BWT7 1032 aa26.98■■□□□ 1.91
COMMD1-208ENST00000472729 LMO7Q8WWI1 1683 aa26.98■■□□□ 1.91
COMMD1-208ENST00000472729 NLRP2Q9NX02 1062 aa26.96■■□□□ 1.91
COMMD1-208ENST00000472729 MON2Q7Z3U7 1717 aa26.96■■□□□ 1.91
COMMD1-208ENST00000472729 TRIM37O94972 964 aa26.95■■□□□ 1.9
COMMD1-208ENST00000472729 EP400Q96L91 3159 aa26.94■■□□□ 1.9
COMMD1-208ENST00000472729 AMPHP49418 695 aa26.94■■□□□ 1.9
COMMD1-208ENST00000472729 BRWD3Q6RI45 1802 aa26.93■■□□□ 1.9
COMMD1-208ENST00000472729 THSD7AQ9UPZ6 1657 aa26.92■■□□□ 1.9
COMMD1-208ENST00000472729 NFAT5O94916 1531 aa26.92■■□□□ 1.9
COMMD1-208ENST00000472729 ANKRD24Q8TF21 1146 aa26.91■■□□□ 1.9
COMMD1-208ENST00000472729 GGNBP2Q9H3C7 697 aa26.91■■□□□ 1.9
COMMD1-208ENST00000472729 CCDC7Q96M83 1385 aa26.91■■□□□ 1.9
COMMD1-208ENST00000472729 EXOC5O00471 708 aa26.9■■□□□ 1.9
COMMD1-208ENST00000472729 APBA3O96018 575 aa26.9■■□□□ 1.9
COMMD1-208ENST00000472729 HSPA5P11021 654 aaKnown RBP26.9■■□□□ 1.9
COMMD1-208ENST00000472729 OVOS2A0A0J9YW53 1432 aa26.9■■□□□ 1.9
COMMD1-208ENST00000472729 OVOS2Q6IE36 1432 aa26.9■■□□□ 1.9
COMMD1-208ENST00000472729 ERBB3P21860 1342 aa26.9■■□□□ 1.9
COMMD1-208ENST00000472729 FYB1O15117 783 aa26.89■■□□□ 1.9
COMMD1-208ENST00000472729 EN1Q05925 392 aaPredicted RBP26.89■■□□□ 1.9
COMMD1-208ENST00000472729 IP6K1Q92551 441 aa26.89■■□□□ 1.9
COMMD1-208ENST00000472729 LTV1Q96GA3 475 aaPredicted RBP26.88■■□□□ 1.89
COMMD1-208ENST00000472729 ABCC6O95255 1503 aa26.86■■□□□ 1.89
COMMD1-208ENST00000472729 MAP3K19Q56UN5 1328 aa26.84■■□□□ 1.89
COMMD1-208ENST00000472729 OVOS2A0A0G2JMS6 1433 aa26.83■■□□□ 1.89
COMMD1-208ENST00000472729 IL2RBP14784 551 aa26.82■■□□□ 1.88
COMMD1-208ENST00000472729 CGNL1Q0VF96 1302 aa26.82■■□□□ 1.88
COMMD1-208ENST00000472729 HOXC9P31274 260 aa26.81■■□□□ 1.88
COMMD1-208ENST00000472729 RRS1Q15050 365 aaKnown RBP26.81■■□□□ 1.88
COMMD1-208ENST00000472729 CARD14Q9BXL6 1004 aa26.81■■□□□ 1.88
COMMD1-208ENST00000472729 COL18A1P39060 1754 aa26.81■■□□□ 1.88
COMMD1-208ENST00000472729 NSD3Q9BZ95 1437 aa26.81■■□□□ 1.88
COMMD1-208ENST00000472729 FBLN1P23142 703 aa26.8■■□□□ 1.88
COMMD1-208ENST00000472729 EZH2Q15910 746 aaKnown RBP26.79■■□□□ 1.88
COMMD1-208ENST00000472729 MARCH10Q8NA82 808 aaPredicted RBP26.77■■□□□ 1.88
COMMD1-208ENST00000472729 USP54Q70EL1 1684 aa26.76■■□□□ 1.87
COMMD1-208ENST00000472729 DISP2A7MBM2 1401 aa26.75■■□□□ 1.87
COMMD1-208ENST00000472729 SMG6Q86US8 1419 aaKnown RBP26.75■■□□□ 1.87
COMMD1-208ENST00000472729 RTL1A6NKG5 1358 aa26.75■■□□□ 1.87
COMMD1-208ENST00000472729 PARD3Q8TEW0 1356 aa26.75■■□□□ 1.87
COMMD1-208ENST00000472729 PPM1GO15355 546 aaPredicted RBP26.75■■□□□ 1.87
COMMD1-208ENST00000472729 CAMKK2Q96RR4 588 aa26.75■■□□□ 1.87
COMMD1-208ENST00000472729 BCL11BQ9C0K0 894 aaPredicted RBP26.75■■□□□ 1.87
COMMD1-208ENST00000472729 NBPF14Q5TI25 921 aa26.74■■□□□ 1.87
COMMD1-208ENST00000472729 RGPD1P0DJD0 1748 aa26.73■■□□□ 1.87
COMMD1-208ENST00000472729 PARP4Q9UKK3 1724 aaKnown RBP26.73■■□□□ 1.87
COMMD1-208ENST00000472729 PANK3Q9H999 370 aa26.72■■□□□ 1.87
COMMD1-208ENST00000472729 PSDA5PKW4 1024 aaPredicted RBP26.71■■□□□ 1.87
COMMD1-208ENST00000472729 TNS2Q63HR2 1409 aa26.69■■□□□ 1.86
COMMD1-208ENST00000472729 DDX54Q8TDD1 881 aaKnown RBP26.69■■□□□ 1.86
COMMD1-208ENST00000472729 FLT4P35916 1363 aa26.69■■□□□ 1.86
COMMD1-208ENST00000472729 R3HDM1Q15032 1099 aaKnown RBP26.68■■□□□ 1.86
COMMD1-208ENST00000472729 KIF24Q5T7B8 1368 aa26.68■■□□□ 1.86
COMMD1-208ENST00000472729 LTN1O94822 1766 aa26.67■■□□□ 1.86
COMMD1-208ENST00000472729 HSP90AB2PQ58FF8 381 aa26.67■■□□□ 1.86
COMMD1-208ENST00000472729 RAPGEF4Q8WZA2 1011 aa26.67■■□□□ 1.86
COMMD1-208ENST00000472729 LRRC37A3O60309 1634 aa26.67■■□□□ 1.86
COMMD1-208ENST00000472729 PLSCR1O15162 318 aa26.66■■□□□ 1.86
COMMD1-208ENST00000472729 TNNT2P45379 298 aaPredicted RBP26.66■■□□□ 1.86
COMMD1-208ENST00000472729 KNSTRNQ9Y448 316 aa26.66■■□□□ 1.86
COMMD1-208ENST00000472729 RGPD5Q99666 1765 aa26.66■■□□□ 1.86
COMMD1-208ENST00000472729 BCL9O00512 1426 aa26.65■■□□□ 1.86
COMMD1-208ENST00000472729 EMILIN1Q9Y6C2 1016 aa26.65■■□□□ 1.86
COMMD1-208ENST00000472729 INSRP06213 1382 aa26.64■■□□□ 1.86
COMMD1-208ENST00000472729 ACSBG1Q96GR2 724 aa26.64■■□□□ 1.86
COMMD1-208ENST00000472729 NBPF6Q5VWK0 638 aa26.63■■□□□ 1.85
COMMD1-208ENST00000472729 ZCRB1Q8TBF4 217 aaKnown RBP26.63■■□□□ 1.85
COMMD1-208ENST00000472729 NBPF4Q96M43 638 aa26.63■■□□□ 1.85
COMMD1-208ENST00000472729 TATP17735 454 aaPredicted RBP26.62■■□□□ 1.85
COMMD1-208ENST00000472729 USHBP1Q8N6Y0 703 aa26.61■■□□□ 1.85
COMMD1-208ENST00000472729 MORC1Q86VD1 984 aa26.6■■□□□ 1.85
COMMD1-208ENST00000472729 KCNQ2O43526 872 aa26.59■■□□□ 1.85
COMMD1-208ENST00000472729 MYOM1P52179 1685 aa26.59■■□□□ 1.85
COMMD1-208ENST00000472729 TNS1Q9HBL0 1735 aaKnown RBP26.59■■□□□ 1.85
COMMD1-208ENST00000472729 PTF1AQ7RTS3 328 aa26.58■■□□□ 1.85
COMMD1-208ENST00000472729 SYTL4Q96C24 671 aaPredicted RBP26.58■■□□□ 1.85
COMMD1-208ENST00000472729 WASHC2AQ641Q2 1341 aa26.57■■□□□ 1.84
COMMD1-208ENST00000472729 NSD2O96028 1365 aa26.57■■□□□ 1.84
COMMD1-208ENST00000472729 POLKQ9UBT6 870 aa26.56■■□□□ 1.84
COMMD1-208ENST00000472729 KIF7Q2M1P5 1343 aa26.56■■□□□ 1.84
COMMD1-208ENST00000472729 KIF20BQ96Q89 1820 aa26.55■■□□□ 1.84
COMMD1-208ENST00000472729 PEAK1Q9H792 1746 aa26.53■■□□□ 1.84
COMMD1-208ENST00000472729 TXNRD1Q16881 649 aa26.53■■□□□ 1.84
COMMD1-208ENST00000472729 WNK3Q9BYP7 1800 aa26.52■■□□□ 1.84
COMMD1-208ENST00000472729 FAM208AQ9UK61 1670 aaKnown RBP26.52■■□□□ 1.84
COMMD1-208ENST00000472729 STK32BQ9NY57 414 aa26.5■■□□□ 1.83
COMMD1-208ENST00000472729 PCDH11XQ9BZA7 1347 aa26.49■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms