RNA–Protein interactions for RNA: ENST00000472673.5

COMMD3-211, Transcript of COMM domain containing 3, humanhuman

TSL 3

Gene COMMD3, Length 237 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-211ENST00000472673 POTECB2RU33 542 aa8.27□□□□□ -1.09
COMMD3-211ENST00000472673 NR1H3Q13133 447 aa8.27□□□□□ -1.09
COMMD3-211ENST00000472673 PCDHB9Q9Y5E1 797 aa8.27□□□□□ -1.09
COMMD3-211ENST00000472673 TIMP2P16035 220 aa8.26□□□□□ -1.09
COMMD3-211ENST00000472673 CCDC116Q8IYX3 515 aa8.26□□□□□ -1.09
COMMD3-211ENST00000472673 GDPD2Q9HCC8 539 aa8.26□□□□□ -1.09
COMMD3-211ENST00000472673 ZIC2O95409 532 aaPredicted RBP8.25□□□□□ -1.09
COMMD3-211ENST00000472673 NBPF20Q3BBV1 942 aa8.25□□□□□ -1.09
COMMD3-211ENST00000472673 ITPKCQ96DU7 683 aa8.25□□□□□ -1.09
COMMD3-211ENST00000472673 ZFAND3Q9H8U3 227 aa8.25□□□□□ -1.09
COMMD3-211ENST00000472673 ATP13A2Q9NQ11 1180 aa8.25□□□□□ -1.09
COMMD3-211ENST00000472673 ABL2P42684 1182 aa8.24□□□□□ -1.09
COMMD3-211ENST00000472673 RAB15P59190 212 aa8.24□□□□□ -1.09
COMMD3-211ENST00000472673 INTS6LQ5JSJ4 861 aaKnown RBP8.24□□□□□ -1.09
COMMD3-211ENST00000472673 KLF16Q9BXK1 252 aaPredicted RBP8.24□□□□□ -1.09
COMMD3-211ENST00000472673 ZNF330Q9Y3S2 320 aaPredicted RBP8.24□□□□□ -1.09
COMMD3-211ENST00000472673 BMP1P13497 986 aa8.23□□□□□ -1.09
COMMD3-211ENST00000472673 FLIIQ13045 1269 aa8.23□□□□□ -1.09
COMMD3-211ENST00000472673 GMPR2Q9P2T1 348 aaKnown RBP8.23□□□□□ -1.09
COMMD3-211ENST00000472673 EMILIN1Q9Y6C2 1016 aa8.23□□□□□ -1.09
COMMD3-211ENST00000472673 DHX9Q08211 1270 aaKnown RBP8.22□□□□□ -1.09
COMMD3-211ENST00000472673 IRF5Q13568 498 aa8.22□□□□□ -1.09
COMMD3-211ENST00000472673 PPP1R26Q5T8A7 1209 aaPredicted RBP8.22□□□□□ -1.09
COMMD3-211ENST00000472673 TRIM46Q7Z4K8 759 aa8.21□□□□□ -1.1
COMMD3-211ENST00000472673 COG6Q9Y2V7 657 aa8.21□□□□□ -1.1
COMMD3-211ENST00000472673 GIGYF1O75420 1035 aaPredicted RBP8.2□□□□□ -1.1
COMMD3-211ENST00000472673 PGPEP1Q9NXJ5 209 aa8.2□□□□□ -1.1
COMMD3-211ENST00000472673 ESPNB1AK53 854 aa8.19□□□□□ -1.1
COMMD3-211ENST00000472673 UBTFP17480 764 aaKnown RBP8.19□□□□□ -1.1
COMMD3-211ENST00000472673 VAC14Q08AM6 782 aa8.19□□□□□ -1.1
COMMD3-211ENST00000472673 MRPL14Q6P1L8 145 aaKnown RBP8.19□□□□□ -1.1
COMMD3-211ENST00000472673 ZNF592Q92610 1267 aa8.19□□□□□ -1.1
COMMD3-211ENST00000472673 POM121Q96HA1 1249 aa8.19□□□□□ -1.1
COMMD3-211ENST00000472673 SENP2Q9HC62 589 aa8.19□□□□□ -1.1
COMMD3-211ENST00000472673 C11orf95C9JLR9 678 aaPredicted RBP8.18□□□□□ -1.1
COMMD3-211ENST00000472673 ERVH48-1M5A8F1 160 aa8.18□□□□□ -1.1
COMMD3-211ENST00000472673 RAD21O60216 631 aa8.18□□□□□ -1.1
COMMD3-211ENST00000472673 MCCD1P59942 119 aaPredicted RBP8.18□□□□□ -1.1
COMMD3-211ENST00000472673 TMPRSS4Q9NRS4 437 aa8.18□□□□□ -1.1
COMMD3-211ENST00000472673 EIF4G2P78344 907 aaKnown RBP eCLIP8.17□□□□□ -1.1
COMMD3-211ENST00000472673 CBLBQ13191 982 aa8.17□□□□□ -1.1
COMMD3-211ENST00000472673 SCARF1Q14162 830 aa8.17□□□□□ -1.1
COMMD3-211ENST00000472673 SEPT12Q8IYM1 358 aa8.17□□□□□ -1.1
COMMD3-211ENST00000472673 PURBQ96QR8 312 aaKnown RBP8.17□□□□□ -1.1
COMMD3-211ENST00000472673 UPP2O95045 317 aa8.16□□□□□ -1.1
COMMD3-211ENST00000472673 WASHC4Q2M389 1173 aa8.16□□□□□ -1.1
COMMD3-211ENST00000472673 C6orf118Q5T5N4 469 aa8.16□□□□□ -1.1
COMMD3-211ENST00000472673 MEIOBQ8N635 442 aa8.16□□□□□ -1.1
COMMD3-211ENST00000472673 KIFC2Q96AC6 838 aa8.16□□□□□ -1.1
COMMD3-211ENST00000472673 TRIM47Q96LD4 638 aa8.16□□□□□ -1.1
COMMD3-211ENST00000472673 ZFP42Q96MM3 310 aa8.16□□□□□ -1.1
COMMD3-211ENST00000472673 LCE2AQ5TA79 106 aaPredicted RBP8.15□□□□□ -1.1
COMMD3-211ENST00000472673 RNF20Q5VTR2 975 aa8.15□□□□□ -1.1
COMMD3-211ENST00000472673 WWC1Q8IX03 1113 aa8.15□□□□□ -1.1
COMMD3-211ENST00000472673 ZNF784Q8NCA9 323 aaPredicted RBP8.15□□□□□ -1.1
COMMD3-211ENST00000472673 BMP2P12643 396 aa8.14□□□□□ -1.11
COMMD3-211ENST00000472673 SNRPBP14678 240 aaKnown RBP8.14□□□□□ -1.11
COMMD3-211ENST00000472673 TREML4Q6UXN2 200 aa8.14□□□□□ -1.11
COMMD3-211ENST00000472673 LINC00528Q8N1L1 170 aa8.14□□□□□ -1.11
COMMD3-211ENST00000472673 CYLDQ9NQC7 956 aa8.14□□□□□ -1.11
COMMD3-211ENST00000472673 Q6ZVU0 165 aa8.13□□□□□ -1.11
COMMD3-211ENST00000472673 TSEN34Q9BSV6 310 aaKnown RBP8.13□□□□□ -1.11
COMMD3-211ENST00000472673 CEP126Q9P2H0 1117 aa8.13□□□□□ -1.11
COMMD3-211ENST00000472673 SEMA3FQ13275 785 aa8.12□□□□□ -1.11
COMMD3-211ENST00000472673 CCDC125Q86Z20 511 aa8.12□□□□□ -1.11
COMMD3-211ENST00000472673 AGBL1Q96MI9 1066 aa8.12□□□□□ -1.11
COMMD3-211ENST00000472673 PCDHB11Q9Y5F2 797 aa8.12□□□□□ -1.11
COMMD3-211ENST00000472673 LILRA1O75019 489 aa8.11□□□□□ -1.11
COMMD3-211ENST00000472673 ADD1P35611 737 aaKnown RBP8.11□□□□□ -1.11
COMMD3-211ENST00000472673 RELBQ01201 579 aa8.11□□□□□ -1.11
COMMD3-211ENST00000472673 TRIM52Q96A61 297 aa8.11□□□□□ -1.11
COMMD3-211ENST00000472673 CLUAP1Q96AJ1 413 aa8.11□□□□□ -1.11
COMMD3-211ENST00000472673 SLFNL1Q499Z3 407 aa8.1□□□□□ -1.11
COMMD3-211ENST00000472673 ADH1AP07327 375 aa8.09□□□□□ -1.11
COMMD3-211ENST00000472673 SOX11P35716 441 aa8.09□□□□□ -1.11
COMMD3-211ENST00000472673 RNF135Q8IUD6 432 aa8.09□□□□□ -1.11
COMMD3-211ENST00000472673 ERVK-9P63128 1117 aa8.08□□□□□ -1.12
COMMD3-211ENST00000472673 CC2D2BQ6DHV5 1058 aa8.08□□□□□ -1.12
COMMD3-211ENST00000472673 CCDC85AQ96PX6 553 aaPredicted RBP8.08□□□□□ -1.12
COMMD3-211ENST00000472673 ZNF395Q9H8N7 513 aaPredicted RBP8.08□□□□□ -1.12
COMMD3-211ENST00000472673 SOBPA7XYQ1 873 aa8.07□□□□□ -1.12
COMMD3-211ENST00000472673 POM121CA8CG34 1229 aa8.07□□□□□ -1.12
COMMD3-211ENST00000472673 SCTRP47872 440 aa8.07□□□□□ -1.12
COMMD3-211ENST00000472673 ESF1Q9H501 851 aaKnown RBP8.07□□□□□ -1.12
COMMD3-211ENST00000472673 SPINT1O43278 529 aa8.06□□□□□ -1.12
COMMD3-211ENST00000472673 MAN1A2O60476 641 aa8.06□□□□□ -1.12
COMMD3-211ENST00000472673 TSGA10IPQ3SY00 556 aa8.06□□□□□ -1.12
COMMD3-211ENST00000472673 PROSER2Q86WR7 435 aaPredicted RBP8.06□□□□□ -1.12
COMMD3-211ENST00000472673 PHTF2Q8N3S3 785 aa8.06□□□□□ -1.12
COMMD3-211ENST00000472673 CDCA7Q9BWT1 371 aaPredicted RBP8.06□□□□□ -1.12
COMMD3-211ENST00000472673 DOLKQ9UPQ8 538 aa8.06□□□□□ -1.12
COMMD3-211ENST00000472673 SOS2Q07890 1332 aaPredicted RBP8.05□□□□□ -1.12
COMMD3-211ENST00000472673 TTLL8A6PVC2 850 aa8.05□□□□□ -1.12
COMMD3-211ENST00000472673 ATP5J2-PTCD1G3V325 749 aa8.05□□□□□ -1.12
COMMD3-211ENST00000472673 PTGIRP43119 386 aa8.05□□□□□ -1.12
COMMD3-211ENST00000472673 KDF1Q8NAX2 398 aaPredicted RBP8.05□□□□□ -1.12
COMMD3-211ENST00000472673 INSM2Q96T92 566 aaPredicted RBP8.05□□□□□ -1.12
COMMD3-211ENST00000472673 ALG2Q9H553 416 aa8.05□□□□□ -1.12
COMMD3-211ENST00000472673 POLMQ9NP87 494 aaPredicted RBP8.05□□□□□ -1.12
COMMD3-211ENST00000472673 FIGNL2A6NMB9 653 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms