RNA–Protein interactions for RNA: ENST00000472401.5

PDE9A-222, Transcript of phosphodiesterase 9A, human

TSL 3

Gene PDE9A, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDE9A-222	ENST00000472401	GPBP1L1	Q9HC44	474 aa	Predicted RBP	13.59	□□□□□ -0.23
PDE9A-222	ENST00000472401	BCL9	O00512	1426 aa		13.58	□□□□□ -0.24
PDE9A-222	ENST00000472401	PAPPA	Q13219	1627 aa		13.58	□□□□□ -0.24
PDE9A-222	ENST00000472401	WASL	O00401	505 aa	Predicted RBP	13.58	□□□□□ -0.24
PDE9A-222	ENST00000472401	ZNF827	Q17R98	1081 aa		13.58	□□□□□ -0.24
PDE9A-222	ENST00000472401	ZNF526	Q8TF50	670 aa	Predicted RBP	13.58	□□□□□ -0.24
PDE9A-222	ENST00000472401	USP19	O94966	1318 aa		13.58	□□□□□ -0.24
PDE9A-222	ENST00000472401	COL13A1	Q5TAT6	717 aa	Predicted RBP	13.56	□□□□□ -0.24
PDE9A-222	ENST00000472401	TRAK1	Q9UPV9	953 aa		13.56	□□□□□ -0.24
PDE9A-222	ENST00000472401	GRIN3B	O60391	1043 aa		13.55	□□□□□ -0.24
PDE9A-222	ENST00000472401	ADCY9	O60503	1353 aa		13.55	□□□□□ -0.24
PDE9A-222	ENST00000472401	TOPAZ1	Q8N9V7	1692 aa		13.54	□□□□□ -0.24
PDE9A-222	ENST00000472401	ZBTB7C	A1YPR0	619 aa		13.54	□□□□□ -0.24
PDE9A-222	ENST00000472401	GC	P02774	474 aa		13.54	□□□□□ -0.24
PDE9A-222	ENST00000472401	POLD1	P28340	1107 aa		13.53	□□□□□ -0.24
PDE9A-222	ENST00000472401	TOM1L2	Q6ZVM7	507 aa		13.53	□□□□□ -0.24
PDE9A-222	ENST00000472401	DNAJC5G	Q8N7S2	189 aa		13.53	□□□□□ -0.24
PDE9A-222	ENST00000472401	ABTB2	Q8N961	1025 aa		13.53	□□□□□ -0.24
PDE9A-222	ENST00000472401	NUDT16	Q96DE0	195 aa	Known RBP	13.53	□□□□□ -0.24
PDE9A-222	ENST00000472401	ADGRB1	O14514	1584 aa		13.53	□□□□□ -0.24
PDE9A-222	ENST00000472401	AKAP12	Q02952	1782 aa		13.53	□□□□□ -0.24
PDE9A-222	ENST00000472401	ACE	P12821	1306 aa		13.52	□□□□□ -0.25
PDE9A-222	ENST00000472401	WNK3	Q9BYP7	1800 aa		13.51	□□□□□ -0.25
PDE9A-222	ENST00000472401	ITSN1	Q15811	1721 aa		13.51	□□□□□ -0.25
PDE9A-222	ENST00000472401	POLR3A	O14802	1390 aa	Predicted RBP	13.51	□□□□□ -0.25
PDE9A-222	ENST00000472401	LRRC4B	Q9NT99	713 aa		13.51	□□□□□ -0.25
PDE9A-222	ENST00000472401	KIF3C	O14782	793 aa		13.5	□□□□□ -0.25
PDE9A-222	ENST00000472401	APLP1	P51693	650 aa		13.5	□□□□□ -0.25
PDE9A-222	ENST00000472401	PRELP	P51888	382 aa		13.5	□□□□□ -0.25
PDE9A-222	ENST00000472401	TRIM26	Q12899	539 aa	Predicted RBP	13.5	□□□□□ -0.25
PDE9A-222	ENST00000472401	ACSBG1	Q96GR2	724 aa		13.5	□□□□□ -0.25
PDE9A-222	ENST00000472401	TNS4	Q8IZW8	715 aa		13.49	□□□□□ -0.25
PDE9A-222	ENST00000472401	SLC16A10	Q8TF71	515 aa		13.49	□□□□□ -0.25
PDE9A-222	ENST00000472401	COL24A1	Q17RW2	1714 aa		13.49	□□□□□ -0.25
PDE9A-222	ENST00000472401	PNPLA7	Q6ZV29	1317 aa		13.48	□□□□□ -0.25
PDE9A-222	ENST00000472401	NHS	Q6T4R5	1651 aa		13.48	□□□□□ -0.25
PDE9A-222	ENST00000472401	SLC34A2	O95436	690 aa		13.48	□□□□□ -0.25
PDE9A-222	ENST00000472401	NLRP13	Q86W25	1043 aa		13.48	□□□□□ -0.25
PDE9A-222	ENST00000472401	AKT1S1	Q96B36	256 aa		13.48	□□□□□ -0.25
PDE9A-222	ENST00000472401	CDCA7	Q9BWT1	371 aa	Predicted RBP	13.48	□□□□□ -0.25
PDE9A-222	ENST00000472401	WDR17	Q8IZU2	1322 aa		13.47	□□□□□ -0.25
PDE9A-222	ENST00000472401	PPARGC1B	Q86YN6	1023 aa	Known RBP	13.47	□□□□□ -0.25
PDE9A-222	ENST00000472401	AXIN2	Q9Y2T1	843 aa		13.47	□□□□□ -0.25
PDE9A-222	ENST00000472401	TNS2	Q63HR2	1409 aa		13.46	□□□□□ -0.26
PDE9A-222	ENST00000472401	BRD4	O60885	1362 aa	Predicted RBP	13.45	□□□□□ -0.26
PDE9A-222	ENST00000472401	EXOC5	O00471	708 aa		13.45	□□□□□ -0.26
PDE9A-222	ENST00000472401	USP6	P35125	1406 aa		13.45	□□□□□ -0.26
PDE9A-222	ENST00000472401	PLEKHG3	A1L390	1219 aa		13.44	□□□□□ -0.26
PDE9A-222	ENST00000472401	CDK19	Q9BWU1	502 aa		13.44	□□□□□ -0.26
PDE9A-222	ENST00000472401	PCGF6	Q9BYE7	350 aa		13.44	□□□□□ -0.26
PDE9A-222	ENST00000472401	COL18A1	P39060	1754 aa		13.44	□□□□□ -0.26
PDE9A-222	ENST00000472401	QSER1	Q2KHR3	1735 aa		13.43	□□□□□ -0.26
PDE9A-222	ENST00000472401	ARHGEF28	Q8N1W1	1705 aa	Known RBP	13.43	□□□□□ -0.26
PDE9A-222	ENST00000472401	CARD10	Q9BWT7	1032 aa		13.43	□□□□□ -0.26
PDE9A-222	ENST00000472401	BTAF1	O14981	1849 aa		13.43	□□□□□ -0.26
PDE9A-222	ENST00000472401	SLIT3	O75094	1523 aa		13.43	□□□□□ -0.26
PDE9A-222	ENST00000472401	TUBGCP6	Q96RT7	1819 aa		13.42	□□□□□ -0.26
PDE9A-222	ENST00000472401	KCNQ4	P56696	695 aa		13.42	□□□□□ -0.26
PDE9A-222	ENST00000472401	HTRA3	P83110	453 aa		13.42	□□□□□ -0.26
PDE9A-222	ENST00000472401	TFCP2L1	Q9NZI6	479 aa		13.42	□□□□□ -0.26
PDE9A-222	ENST00000472401	CCDC61	Q9Y6R9	512 aa		13.42	□□□□□ -0.26
PDE9A-222	ENST00000472401	CPSF1	Q10570	1443 aa	Known RBP	13.4	□□□□□ -0.26
PDE9A-222	ENST00000472401	CSB-PGBD3	P0DP91	1061 aa		13.4	□□□□□ -0.26
PDE9A-222	ENST00000472401	NLRP6	P59044	892 aa		13.4	□□□□□ -0.26
PDE9A-222	ENST00000472401	MSL1	Q68DK7	614 aa		13.4	□□□□□ -0.26
PDE9A-222	ENST00000472401	JMY	Q8N9B5	988 aa		13.4	□□□□□ -0.26
PDE9A-222	ENST00000472401	MPHOSPH9	Q99550	1183 aa		13.4	□□□□□ -0.26
PDE9A-222	ENST00000472401	WWC3	Q9ULE0	1092 aa		13.4	□□□□□ -0.26
PDE9A-222	ENST00000472401	ABCC6	O95255	1503 aa		13.39	□□□□□ -0.27
PDE9A-222	ENST00000472401	KLRG1	Q96E93	195 aa		13.39	□□□□□ -0.27
PDE9A-222	ENST00000472401	PPIP5K1	Q6PFW1	1433 aa		13.39	□□□□□ -0.27
PDE9A-222	ENST00000472401	SLC27A3	Q5K4L6	730 aa		13.38	□□□□□ -0.27
PDE9A-222	ENST00000472401	WDR90	Q96KV7	1748 aa		13.38	□□□□□ -0.27
PDE9A-222	ENST00000472401	TRPM1	Q7Z4N2	1603 aa		13.38	□□□□□ -0.27
PDE9A-222	ENST00000472401	TOMM70	O94826	608 aa		13.37	□□□□□ -0.27
PDE9A-222	ENST00000472401	CCDC7	Q96M83	1385 aa		13.36	□□□□□ -0.27
PDE9A-222	ENST00000472401	MSH5	O43196	834 aa		13.36	□□□□□ -0.27
PDE9A-222	ENST00000472401	ARHGEF25	Q86VW2	580 aa		13.36	□□□□□ -0.27
PDE9A-222	ENST00000472401	CD2AP	Q9Y5K6	639 aa		13.36	□□□□□ -0.27
PDE9A-222	ENST00000472401	COL23A1	Q86Y22	540 aa	Predicted RBP	13.35	□□□□□ -0.27
PDE9A-222	ENST00000472401	RGPD5	Q99666	1765 aa		13.35	□□□□□ -0.27
PDE9A-222	ENST00000472401	SOX12	O15370	315 aa		13.34	□□□□□ -0.27
PDE9A-222	ENST00000472401	KDM2A	Q9Y2K7	1162 aa		13.34	□□□□□ -0.27
PDE9A-222	ENST00000472401	PCNT	O95613	3336 aa		13.34	□□□□□ -0.27
PDE9A-222	ENST00000472401	PIK3C2A	O00443	1686 aa		13.34	□□□□□ -0.27
PDE9A-222	ENST00000472401	NMRK2	Q9NPI5	230 aa		13.33	□□□□□ -0.28
PDE9A-222	ENST00000472401	IGSF1	Q8N6C5	1336 aa		13.33	□□□□□ -0.28
PDE9A-222	ENST00000472401	KAT6B	Q8WYB5	2073 aa		13.3	□□□□□ -0.28
PDE9A-222	ENST00000472401	CIC	Q96RK0	1608 aa	Predicted RBP	13.29	□□□□□ -0.28
PDE9A-222	ENST00000472401	IL2RB	P14784	551 aa		13.29	□□□□□ -0.28
PDE9A-222	ENST00000472401	SRPK2	P78362	688 aa	Known RBP	13.29	□□□□□ -0.28
PDE9A-222	ENST00000472401	RBM46	Q8TBY0	533 aa	Known RBP	13.29	□□□□□ -0.28
PDE9A-222	ENST00000472401	CABP2	Q9NPB3	220 aa		13.29	□□□□□ -0.28
PDE9A-222	ENST00000472401	NLRP2	Q9NX02	1062 aa		13.29	□□□□□ -0.28
PDE9A-222	ENST00000472401	NFAT5	O94916	1531 aa		13.29	□□□□□ -0.28
PDE9A-222	ENST00000472401	HSPA1A	P0DMV8	641 aa	Known RBP	13.28	□□□□□ -0.28
PDE9A-222	ENST00000472401	HSPA1B	P0DMV9	641 aa	Known RBP	13.28	□□□□□ -0.28
PDE9A-222	ENST00000472401	DCAF11	Q8TEB1	546 aa		13.28	□□□□□ -0.28
PDE9A-222	ENST00000472401	CCNL1	Q9UK58	526 aa	Predicted RBP	13.28	□□□□□ -0.28
PDE9A-222	ENST00000472401	NSD2	O96028	1365 aa		13.28	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms