RNA–Protein interactions for RNA: ENST00000472027.1

SYN3-211, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-211ENST00000472027 NFAT5O94916 1531 aa12.69□□□□□ -0.38
SYN3-211ENST00000472027 BARGINQ6ZT62 677 aa12.69□□□□□ -0.38
SYN3-211ENST00000472027 TOM1L2Q6ZVM7 507 aa12.69□□□□□ -0.38
SYN3-211ENST00000472027 TCP11L2Q8N4U5 519 aa12.69□□□□□ -0.38
SYN3-211ENST00000472027 GGNBP2Q9H3C7 697 aa12.69□□□□□ -0.38
SYN3-211ENST00000472027 THRAP3Q9Y2W1 955 aaKnown RBP12.69□□□□□ -0.38
SYN3-211ENST00000472027 OVOS2A0A0J9YW53 1432 aa12.69□□□□□ -0.38
SYN3-211ENST00000472027 OVOS2Q6IE36 1432 aa12.69□□□□□ -0.38
SYN3-211ENST00000472027 FBLN1P23142 703 aa12.68□□□□□ -0.38
SYN3-211ENST00000472027 COL18A1P39060 1754 aa12.68□□□□□ -0.38
SYN3-211ENST00000472027 WDR17Q8IZU2 1322 aa12.67□□□□□ -0.38
SYN3-211ENST00000472027 CSB-PGBD3P0DP91 1061 aa12.67□□□□□ -0.38
SYN3-211ENST00000472027 CCDC125Q86Z20 511 aa12.67□□□□□ -0.38
SYN3-211ENST00000472027 CRB1P82279 1406 aa12.67□□□□□ -0.38
SYN3-211ENST00000472027 USP54Q70EL1 1684 aa12.67□□□□□ -0.38
SYN3-211ENST00000472027 FAM182BQ5T319 152 aa12.66□□□□□ -0.38
SYN3-211ENST00000472027 NSD3Q9BZ95 1437 aa12.65□□□□□ -0.38
SYN3-211ENST00000472027 IP6K1Q92551 441 aa12.65□□□□□ -0.38
SYN3-211ENST00000472027 CARD10Q9BWT7 1032 aa12.65□□□□□ -0.38
SYN3-211ENST00000472027 PANK3Q9H999 370 aa12.65□□□□□ -0.38
SYN3-211ENST00000472027 BRWD3Q6RI45 1802 aa12.65□□□□□ -0.39
SYN3-211ENST00000472027 MYOM1P52179 1685 aa12.64□□□□□ -0.39
SYN3-211ENST00000472027 PDE3BQ13370 1112 aa12.64□□□□□ -0.39
SYN3-211ENST00000472027 ANKRD24Q8TF21 1146 aa12.64□□□□□ -0.39
SYN3-211ENST00000472027 THSD7AQ9UPZ6 1657 aa12.64□□□□□ -0.39
SYN3-211ENST00000472027 MAP3K19Q56UN5 1328 aa12.63□□□□□ -0.39
SYN3-211ENST00000472027 AMPHP49418 695 aa12.63□□□□□ -0.39
SYN3-211ENST00000472027 RRS1Q15050 365 aaKnown RBP12.63□□□□□ -0.39
SYN3-211ENST00000472027 ERBB3P21860 1342 aa12.62□□□□□ -0.39
SYN3-211ENST00000472027 CGNL1Q0VF96 1302 aa12.62□□□□□ -0.39
SYN3-211ENST00000472027 ABCC6O95255 1503 aa12.62□□□□□ -0.39
SYN3-211ENST00000472027 HOXC9P31274 260 aa12.62□□□□□ -0.39
SYN3-211ENST00000472027 NLRP2Q9NX02 1062 aa12.62□□□□□ -0.39
SYN3-211ENST00000472027 BLMP54132 1417 aaPredicted RBP12.62□□□□□ -0.39
SYN3-211ENST00000472027 KIF7Q2M1P5 1343 aa12.62□□□□□ -0.39
SYN3-211ENST00000472027 RGPD5Q99666 1765 aa12.61□□□□□ -0.39
SYN3-211ENST00000472027 SF3B2Q13435 895 aaKnown RBP12.61□□□□□ -0.39
SYN3-211ENST00000472027 FAM196AQ6ZSG2 479 aa12.61□□□□□ -0.39
SYN3-211ENST00000472027 LTV1Q96GA3 475 aaPredicted RBP12.61□□□□□ -0.39
SYN3-211ENST00000472027 CDCA7Q9BWT1 371 aaPredicted RBP12.61□□□□□ -0.39
SYN3-211ENST00000472027 CCDC7Q96M83 1385 aa12.6□□□□□ -0.39
SYN3-211ENST00000472027 DDB1Q16531 1140 aa12.6□□□□□ -0.39
SYN3-211ENST00000472027 LTN1O94822 1766 aa12.59□□□□□ -0.39
SYN3-211ENST00000472027 DEFB132Q7Z7B7 95 aa12.59□□□□□ -0.39
SYN3-211ENST00000472027 EXOC5O00471 708 aa12.58□□□□□ -0.4
SYN3-211ENST00000472027 TRIM37O94972 964 aa12.57□□□□□ -0.4
SYN3-211ENST00000472027 IL2RBP14784 551 aa12.57□□□□□ -0.4
SYN3-211ENST00000472027 HSP90AB2PQ58FF8 381 aa12.57□□□□□ -0.4
SYN3-211ENST00000472027 KNSTRNQ9Y448 316 aa12.57□□□□□ -0.4
SYN3-211ENST00000472027 EMILIN1Q9Y6C2 1016 aa12.57□□□□□ -0.4
SYN3-211ENST00000472027 KIF20BQ96Q89 1820 aa12.57□□□□□ -0.4
SYN3-211ENST00000472027 RTL1A6NKG5 1358 aa12.56□□□□□ -0.4
SYN3-211ENST00000472027 DISP2A7MBM2 1401 aa12.56□□□□□ -0.4
SYN3-211ENST00000472027 PPM1GO15355 546 aaPredicted RBP12.56□□□□□ -0.4
SYN3-211ENST00000472027 TNNT2P45379 298 aaPredicted RBP12.56□□□□□ -0.4
SYN3-211ENST00000472027 BAG6P46379 1132 aa12.56□□□□□ -0.4
SYN3-211ENST00000472027 MARCH10Q8NA82 808 aaPredicted RBP12.56□□□□□ -0.4
SYN3-211ENST00000472027 PARP4Q9UKK3 1724 aaKnown RBP12.55□□□□□ -0.4
SYN3-211ENST00000472027 POLKQ9UBT6 870 aa12.55□□□□□ -0.4
SYN3-211ENST00000472027 WASHC2AQ641Q2 1341 aa12.55□□□□□ -0.4
SYN3-211ENST00000472027 INSRP06213 1382 aa12.55□□□□□ -0.4
SYN3-211ENST00000472027 FLT4P35916 1363 aa12.55□□□□□ -0.4
SYN3-211ENST00000472027 KIF24Q5T7B8 1368 aa12.55□□□□□ -0.4
SYN3-211ENST00000472027 PER1O15534 1290 aaPredicted RBP12.54□□□□□ -0.4
SYN3-211ENST00000472027 EN1Q05925 392 aaPredicted RBP12.54□□□□□ -0.4
SYN3-211ENST00000472027 NBPF6Q5VWK0 638 aa12.54□□□□□ -0.4
SYN3-211ENST00000472027 MORC1Q86VD1 984 aa12.54□□□□□ -0.4
SYN3-211ENST00000472027 NBPF4Q96M43 638 aa12.54□□□□□ -0.4
SYN3-211ENST00000472027 APBA3O96018 575 aa12.53□□□□□ -0.4
SYN3-211ENST00000472027 AMER1Q5JTC6 1135 aaPredicted RBP12.53□□□□□ -0.4
SYN3-211ENST00000472027 NSD2O96028 1365 aa12.53□□□□□ -0.4
SYN3-211ENST00000472027 OVOS2A0A0G2JMS6 1433 aa12.53□□□□□ -0.4
SYN3-211ENST00000472027 LRRC37A3O60309 1634 aa12.52□□□□□ -0.4
SYN3-211ENST00000472027 USHBP1Q8N6Y0 703 aa12.52□□□□□ -0.41
SYN3-211ENST00000472027 SMG6Q86US8 1419 aaKnown RBP12.52□□□□□ -0.41
SYN3-211ENST00000472027 EP400Q96L91 3159 aa12.52□□□□□ -0.41
SYN3-211ENST00000472027 EZH2Q15910 746 aaKnown RBP12.51□□□□□ -0.41
SYN3-211ENST00000472027 PEAK1Q9H792 1746 aa12.51□□□□□ -0.41
SYN3-211ENST00000472027 DDX54Q8TDD1 881 aaKnown RBP12.5□□□□□ -0.41
SYN3-211ENST00000472027 CAMKK2Q96RR4 588 aa12.5□□□□□ -0.41
SYN3-211ENST00000472027 TNS2Q63HR2 1409 aa12.5□□□□□ -0.41
SYN3-211ENST00000472027 WNK3Q9BYP7 1800 aa12.5□□□□□ -0.41
SYN3-211ENST00000472027 RGPD1P0DJD0 1748 aa12.49□□□□□ -0.41
SYN3-211ENST00000472027 BCL9O00512 1426 aa12.49□□□□□ -0.41
SYN3-211ENST00000472027 PTF1AQ7RTS3 328 aa12.49□□□□□ -0.41
SYN3-211ENST00000472027 RAPGEF4Q8WZA2 1011 aa12.49□□□□□ -0.41
SYN3-211ENST00000472027 BCL11BQ9C0K0 894 aaPredicted RBP12.49□□□□□ -0.41
SYN3-211ENST00000472027 FAM208AQ9UK61 1670 aaKnown RBP12.48□□□□□ -0.41
SYN3-211ENST00000472027 TATP17735 454 aaPredicted RBP12.48□□□□□ -0.41
SYN3-211ENST00000472027 CC2D1BQ5T0F9 858 aaKnown RBP12.48□□□□□ -0.41
SYN3-211ENST00000472027 ZCRB1Q8TBF4 217 aaKnown RBP12.48□□□□□ -0.41
SYN3-211ENST00000472027 EYA1Q99502 592 aa12.48□□□□□ -0.41
SYN3-211ENST00000472027 MAP2P11137 1827 aaKnown RBP12.47□□□□□ -0.41
SYN3-211ENST00000472027 PLSCR1O15162 318 aa12.47□□□□□ -0.41
SYN3-211ENST00000472027 KCNQ2O43526 872 aa12.47□□□□□ -0.41
SYN3-211ENST00000472027 CNGB1Q14028 1251 aaPredicted RBP12.47□□□□□ -0.41
SYN3-211ENST00000472027 EIF4A2Q14240 407 aaKnown RBP12.47□□□□□ -0.41
SYN3-211ENST00000472027 ACSBG1Q96GR2 724 aa12.47□□□□□ -0.41
SYN3-211ENST00000472027 ANKRD26Q9UPS8 1709 aa12.47□□□□□ -0.41
SYN3-211ENST00000472027 MEGF6O75095 1541 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms