RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 HDGFL2Q7Z4V5 671 aaPredicted RBP31.86■■■□□ 2.69
C9orf3-213ENST00000471978 APBA3O96018 575 aa31.85■■■□□ 2.69
C9orf3-213ENST00000471978 EZH2Q15910 746 aaKnown RBP31.85■■■□□ 2.69
C9orf3-213ENST00000471978 NFAT5O94916 1531 aa31.85■■■□□ 2.69
C9orf3-213ENST00000471978 PUS7Q96PZ0 661 aaKnown RBP31.84■■■□□ 2.69
C9orf3-213ENST00000471978 CAMKK2Q96RR4 588 aa31.83■■■□□ 2.69
C9orf3-213ENST00000471978 USP31Q70CQ4 1352 aa31.82■■■□□ 2.69
C9orf3-213ENST00000471978 NME9Q86XW9 330 aa31.82■■■□□ 2.68
C9orf3-213ENST00000471978 ST20-MTHFSA0A0A6YYL1 179 aa31.81■■■□□ 2.68
C9orf3-213ENST00000471978 CSB-PGBD3P0DP91 1061 aa31.81■■■□□ 2.68
C9orf3-213ENST00000471978 TERF2IPQ9NYB0 399 aa31.81■■■□□ 2.68
C9orf3-213ENST00000471978 DDB1Q16531 1140 aa31.8■■■□□ 2.68
C9orf3-213ENST00000471978 TESK2Q96S53 571 aa31.8■■■□□ 2.68
C9orf3-213ENST00000471978 RGPD5Q99666 1765 aa31.79■■■□□ 2.68
C9orf3-213ENST00000471978 EDC4Q6P2E9 1401 aaKnown RBP31.78■■■□□ 2.68
C9orf3-213ENST00000471978 C11orf95C9JLR9 678 aaPredicted RBP31.78■■■□□ 2.68
C9orf3-213ENST00000471978 A0A1W2PP64 1363 aa31.78■■■□□ 2.68
C9orf3-213ENST00000471978 PARD3Q8TEW0 1356 aa31.78■■■□□ 2.68
C9orf3-213ENST00000471978 CARD10Q9BWT7 1032 aa31.77■■■□□ 2.68
C9orf3-213ENST00000471978 LRRC37A3O60309 1634 aa31.77■■■□□ 2.68
C9orf3-213ENST00000471978 USP54Q70EL1 1684 aa31.76■■■□□ 2.68
C9orf3-213ENST00000471978 CDCA7Q9BWT1 371 aaPredicted RBP31.76■■■□□ 2.67
C9orf3-213ENST00000471978 OVOS2A0A0G2JMS6 1433 aa31.75■■■□□ 2.67
C9orf3-213ENST00000471978 OVOS2A0A0J9YW53 1432 aa31.75■■■□□ 2.67
C9orf3-213ENST00000471978 OVOS2Q6IE36 1432 aa31.75■■■□□ 2.67
C9orf3-213ENST00000471978 ABCC6O95255 1503 aa31.75■■■□□ 2.67
C9orf3-213ENST00000471978 R3HDM1Q15032 1099 aaKnown RBP31.75■■■□□ 2.67
C9orf3-213ENST00000471978 SLC24A1O60721 1099 aa31.74■■■□□ 2.67
C9orf3-213ENST00000471978 WNK3Q9BYP7 1800 aa31.72■■■□□ 2.67
C9orf3-213ENST00000471978 PEAK1Q9H792 1746 aa31.72■■■□□ 2.67
C9orf3-213ENST00000471978 NINLQ9Y2I6 1382 aa31.71■■■□□ 2.67
C9orf3-213ENST00000471978 LRP5O75197 1615 aa31.71■■■□□ 2.67
C9orf3-213ENST00000471978 CCDC7Q96M83 1385 aa31.68■■■□□ 2.66
C9orf3-213ENST00000471978 MARCH10Q8NA82 808 aaPredicted RBP31.68■■■□□ 2.66
C9orf3-213ENST00000471978 RREB1Q92766 1687 aa31.67■■■□□ 2.66
C9orf3-213ENST00000471978 LTN1O94822 1766 aa31.66■■■□□ 2.66
C9orf3-213ENST00000471978 ERBB3P21860 1342 aa31.66■■■□□ 2.66
C9orf3-213ENST00000471978 USP47Q96K76 1375 aa31.66■■■□□ 2.66
C9orf3-213ENST00000471978 EXOC5O00471 708 aa31.65■■■□□ 2.66
C9orf3-213ENST00000471978 NLRP2Q9NX02 1062 aa31.64■■■□□ 2.66
C9orf3-213ENST00000471978 TMF1P82094 1093 aa31.63■■■□□ 2.65
C9orf3-213ENST00000471978 NUP188Q5SRE5 1749 aa31.62■■■□□ 2.65
C9orf3-213ENST00000471978 NBPF14Q5TI25 921 aa31.62■■■□□ 2.65
C9orf3-213ENST00000471978 SBF2Q86WG5 1849 aa31.62■■■□□ 2.65
C9orf3-213ENST00000471978 BCL11BQ9C0K0 894 aaPredicted RBP31.62■■■□□ 2.65
C9orf3-213ENST00000471978 ANKRD24Q8TF21 1146 aa31.61■■■□□ 2.65
C9orf3-213ENST00000471978 BCL9O00512 1426 aa31.6■■■□□ 2.65
C9orf3-213ENST00000471978 PTF1AQ7RTS3 328 aa31.59■■■□□ 2.65
C9orf3-213ENST00000471978 COG3Q96JB2 828 aa31.59■■■□□ 2.65
C9orf3-213ENST00000471978 ANKRD36BQ8N2N9 1353 aa31.58■■■□□ 2.65
C9orf3-213ENST00000471978 PLSCR1O15162 318 aa31.58■■■□□ 2.65
C9orf3-213ENST00000471978 PCGF6Q9BYE7 350 aa31.57■■■□□ 2.64
C9orf3-213ENST00000471978 TNS2Q63HR2 1409 aa31.57■■■□□ 2.64
C9orf3-213ENST00000471978 IP6K1Q92551 441 aa31.56■■■□□ 2.64
C9orf3-213ENST00000471978 TIMELESSQ9UNS1 1208 aa31.56■■■□□ 2.64
C9orf3-213ENST00000471978 IL2RBP14784 551 aa31.54■■■□□ 2.64
C9orf3-213ENST00000471978 RGPD3A6NKT7 1758 aaPredicted RBP31.53■■■□□ 2.64
C9orf3-213ENST00000471978 RGPD4Q7Z3J3 1758 aa31.53■■■□□ 2.64
C9orf3-213ENST00000471978 CLSPNQ9HAW4 1339 aa31.52■■■□□ 2.64
C9orf3-213ENST00000471978 CDCA8Q53HL2 280 aa31.52■■■□□ 2.64
C9orf3-213ENST00000471978 LTV1Q96GA3 475 aaPredicted RBP31.51■■■□□ 2.63
C9orf3-213ENST00000471978 MAP3K19Q56UN5 1328 aa31.49■■■□□ 2.63
C9orf3-213ENST00000471978 FBLN1P23142 703 aa31.49■■■□□ 2.63
C9orf3-213ENST00000471978 AMPHP49418 695 aa31.47■■■□□ 2.63
C9orf3-213ENST00000471978 FYB1O15117 783 aa31.46■■■□□ 2.63
C9orf3-213ENST00000471978 HOXC9P31274 260 aa31.46■■■□□ 2.63
C9orf3-213ENST00000471978 PROM2Q8N271 834 aa31.46■■■□□ 2.63
C9orf3-213ENST00000471978 GGNBP2Q9H3C7 697 aa31.46■■■□□ 2.63
C9orf3-213ENST00000471978 KCNQ2O43526 872 aa31.45■■■□□ 2.63
C9orf3-213ENST00000471978 ACSBG1Q96GR2 724 aa31.44■■■□□ 2.62
C9orf3-213ENST00000471978 FAM208AQ9UK61 1670 aaKnown RBP31.43■■■□□ 2.62
C9orf3-213ENST00000471978 ANO8Q9HCE9 1232 aaPredicted RBP31.42■■■□□ 2.62
C9orf3-213ENST00000471978 RRS1Q15050 365 aaKnown RBP31.4■■■□□ 2.62
C9orf3-213ENST00000471978 TXNRD1Q16881 649 aa31.4■■■□□ 2.62
C9orf3-213ENST00000471978 NHSQ6T4R5 1651 aa31.4■■■□□ 2.62
C9orf3-213ENST00000471978 RTL1A6NKG5 1358 aa31.38■■■□□ 2.61
C9orf3-213ENST00000471978 SPON1Q9HCB6 807 aa31.37■■■□□ 2.61
C9orf3-213ENST00000471978 DDX54Q8TDD1 881 aaKnown RBP31.36■■■□□ 2.61
C9orf3-213ENST00000471978 CARD14Q9BXL6 1004 aa31.35■■■□□ 2.61
C9orf3-213ENST00000471978 KIF20BQ96Q89 1820 aa31.34■■■□□ 2.61
C9orf3-213ENST00000471978 MYOM1P52179 1685 aa31.34■■■□□ 2.61
C9orf3-213ENST00000471978 STK32BQ9NY57 414 aa31.32■■■□□ 2.6
C9orf3-213ENST00000471978 RGPD2P0DJD1 1756 aa31.31■■■□□ 2.6
C9orf3-213ENST00000471978 NSD3Q9BZ95 1437 aa31.31■■■□□ 2.6
C9orf3-213ENST00000471978 NBPF6Q5VWK0 638 aa31.29■■■□□ 2.6
C9orf3-213ENST00000471978 NBPF4Q96M43 638 aa31.29■■■□□ 2.6
C9orf3-213ENST00000471978 PPP1R1BQ9UD71 204 aaPredicted RBP31.29■■■□□ 2.6
C9orf3-213ENST00000471978 SMG6Q86US8 1419 aaKnown RBP31.29■■■□□ 2.6
C9orf3-213ENST00000471978 BTAF1O14981 1849 aa31.28■■■□□ 2.6
C9orf3-213ENST00000471978 KAT6BQ8WYB5 2073 aa31.28■■■□□ 2.6
C9orf3-213ENST00000471978 SLC15A2Q16348 729 aa31.28■■■□□ 2.6
C9orf3-213ENST00000471978 ZCRB1Q8TBF4 217 aaKnown RBP31.28■■■□□ 2.6
C9orf3-213ENST00000471978 CCER1Q8TC90 406 aaPredicted RBP31.28■■■□□ 2.6
C9orf3-213ENST00000471978 PDGFDQ9GZP0 370 aaPredicted RBP31.28■■■□□ 2.6
C9orf3-213ENST00000471978 CASZ1Q86V15 1759 aa31.28■■■□□ 2.6
C9orf3-213ENST00000471978 HSP90AB2PQ58FF8 381 aa31.27■■■□□ 2.6
C9orf3-213ENST00000471978 MEGF6O75095 1541 aa31.27■■■□□ 2.6
C9orf3-213ENST00000471978 USHBP1Q8N6Y0 703 aa31.26■■■□□ 2.59
C9orf3-213ENST00000471978 INSRP06213 1382 aa31.25■■■□□ 2.59
C9orf3-213ENST00000471978 FLT4P35916 1363 aa31.25■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms