RNA–Protein interactions for RNA: ENST00000471910.1

CDHR3-208, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 392 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-208ENST00000471910 GDF9O60383 454 aa9.16□□□□□ -0.94
CDHR3-208ENST00000471910 TNFRSF10AO00220 468 aa9.15□□□□□ -0.94
CDHR3-208ENST00000471910 ALDH1A1P00352 501 aa9.15□□□□□ -0.94
CDHR3-208ENST00000471910 PRR20EP86478 221 aa9.15□□□□□ -0.94
CDHR3-208ENST00000471910 PRR20CP86479 221 aa9.15□□□□□ -0.94
CDHR3-208ENST00000471910 PRR20DP86480 221 aa9.15□□□□□ -0.94
CDHR3-208ENST00000471910 PRR20BP86481 221 aa9.15□□□□□ -0.94
CDHR3-208ENST00000471910 PRR20AP86496 221 aa9.15□□□□□ -0.94
CDHR3-208ENST00000471910 SEPT12Q8IYM1 358 aa9.15□□□□□ -0.94
CDHR3-208ENST00000471910 ADAMTS19Q8TE59 1207 aa9.15□□□□□ -0.94
CDHR3-208ENST00000471910 TLL2Q9Y6L7 1015 aa9.15□□□□□ -0.94
CDHR3-208ENST00000471910 WASF2Q9Y6W5 498 aa9.15□□□□□ -0.94
CDHR3-208ENST00000471910 GIGYF1O75420 1035 aaPredicted RBP9.14□□□□□ -0.95
CDHR3-208ENST00000471910 NR5A1Q13285 461 aa9.14□□□□□ -0.95
CDHR3-208ENST00000471910 RNF135Q8IUD6 432 aa9.14□□□□□ -0.95
CDHR3-208ENST00000471910 ADH1CP00326 375 aa9.13□□□□□ -0.95
CDHR3-208ENST00000471910 DHX9Q08211 1270 aaKnown RBP9.13□□□□□ -0.95
CDHR3-208ENST00000471910 PDZRN3Q9UPQ7 1066 aa9.13□□□□□ -0.95
CDHR3-208ENST00000471910 NFATC2IPQ8NCF5 419 aa9.12□□□□□ -0.95
CDHR3-208ENST00000471910 ESPNB1AK53 854 aa9.11□□□□□ -0.95
CDHR3-208ENST00000471910 SKIP12755 728 aa9.11□□□□□ -0.95
CDHR3-208ENST00000471910 FSHRP23945 695 aa9.11□□□□□ -0.95
CDHR3-208ENST00000471910 GRM5P41594 1212 aa9.11□□□□□ -0.95
CDHR3-208ENST00000471910 RAB15P59190 212 aa9.11□□□□□ -0.95
CDHR3-208ENST00000471910 MAP7D1Q3KQU3 841 aa9.1□□□□□ -0.95
CDHR3-208ENST00000471910 CCDC82Q8N4S0 544 aa9.1□□□□□ -0.95
CDHR3-208ENST00000471910 PPP1R12CQ9BZL4 782 aa9.1□□□□□ -0.95
CDHR3-208ENST00000471910 ESF1Q9H501 851 aaKnown RBP9.1□□□□□ -0.95
CDHR3-208ENST00000471910 C1orf115Q9H7X2 142 aa9.1□□□□□ -0.95
CDHR3-208ENST00000471910 TOR4AQ9NXH8 423 aa9.1□□□□□ -0.95
CDHR3-208ENST00000471910 LZTS3O60299 673 aaPredicted RBP9.09□□□□□ -0.95
CDHR3-208ENST00000471910 INTS6LQ5JSJ4 861 aaKnown RBP9.09□□□□□ -0.95
CDHR3-208ENST00000471910 TRIM67Q6ZTA4 783 aa9.09□□□□□ -0.95
CDHR3-208ENST00000471910 CCDC116Q8IYX3 515 aa9.09□□□□□ -0.95
CDHR3-208ENST00000471910 PHTF2Q8N3S3 785 aa9.09□□□□□ -0.95
CDHR3-208ENST00000471910 TFIP11Q9UBB9 837 aaKnown RBP9.09□□□□□ -0.95
CDHR3-208ENST00000471910 J3QL48 77 aa9.08□□□□□ -0.96
CDHR3-208ENST00000471910 ATP9BO43861 1147 aa9.08□□□□□ -0.96
CDHR3-208ENST00000471910 NNTQ13423 1086 aa9.08□□□□□ -0.96
CDHR3-208ENST00000471910 PLPP7Q8NBV4 271 aa9.08□□□□□ -0.96
CDHR3-208ENST00000471910 ARID3AQ99856 593 aa9.08□□□□□ -0.96
CDHR3-208ENST00000471910 PGPEP1Q9NXJ5 209 aa9.08□□□□□ -0.96
CDHR3-208ENST00000471910 DOLKQ9UPQ8 538 aa9.08□□□□□ -0.96
CDHR3-208ENST00000471910 PALM3A6NDB9 673 aaPredicted RBP9.07□□□□□ -0.96
CDHR3-208ENST00000471910 TBC1D9Q6ZT07 1266 aa9.07□□□□□ -0.96
CDHR3-208ENST00000471910 SIRT1Q96EB6 747 aa9.07□□□□□ -0.96
CDHR3-208ENST00000471910 UCN2Q96RP3 112 aa9.07□□□□□ -0.96
CDHR3-208ENST00000471910 PCDHB11Q9Y5F2 797 aa9.07□□□□□ -0.96
CDHR3-208ENST00000471910 EMILIN1Q9Y6C2 1016 aa9.07□□□□□ -0.96
CDHR3-208ENST00000471910 ERVH48-1M5A8F1 160 aa9.06□□□□□ -0.96
CDHR3-208ENST00000471910 PIK3CDO00329 1044 aa9.06□□□□□ -0.96
CDHR3-208ENST00000471910 GFRA3O60609 400 aa9.06□□□□□ -0.96
CDHR3-208ENST00000471910 LAPTM4AQ15012 233 aa9.06□□□□□ -0.96
CDHR3-208ENST00000471910 SMPD1P17405 629 aa9.05□□□□□ -0.96
CDHR3-208ENST00000471910 LMOD1P29536 600 aaPredicted RBP9.05□□□□□ -0.96
CDHR3-208ENST00000471910 USP4Q13107 963 aa9.05□□□□□ -0.96
CDHR3-208ENST00000471910 EML3Q32P44 896 aa9.05□□□□□ -0.96
CDHR3-208ENST00000471910 PPP1R26Q5T8A7 1209 aaPredicted RBP9.05□□□□□ -0.96
CDHR3-208ENST00000471910 CHIC2Q9UKJ5 165 aa9.05□□□□□ -0.96
CDHR3-208ENST00000471910 USP17L5A8MUK1 530 aa9.04□□□□□ -0.96
CDHR3-208ENST00000471910 NRG2O14511 850 aaPredicted RBP9.04□□□□□ -0.96
CDHR3-208ENST00000471910 MYCP01106 439 aaPredicted RBP9.04□□□□□ -0.96
CDHR3-208ENST00000471910 MYT1Q01538 1121 aa9.04□□□□□ -0.96
CDHR3-208ENST00000471910 OXLD1Q5BKU9 147 aa9.04□□□□□ -0.96
CDHR3-208ENST00000471910 CCDC85AQ96PX6 553 aaPredicted RBP9.04□□□□□ -0.96
CDHR3-208ENST00000471910 MAFBQ9Y5Q3 323 aaPredicted RBP9.04□□□□□ -0.96
CDHR3-208ENST00000471910 FAM187AA6NFU0 413 aa9.03□□□□□ -0.96
CDHR3-208ENST00000471910 NR3C2P08235 984 aa9.03□□□□□ -0.96
CDHR3-208ENST00000471910 RFX1P22670 979 aa9.03□□□□□ -0.96
CDHR3-208ENST00000471910 PLEKHM2Q8IWE5 1019 aa9.03□□□□□ -0.96
CDHR3-208ENST00000471910 USP17L3A6NCW0 530 aa9.02□□□□□ -0.97
CDHR3-208ENST00000471910 USP17L4A6NCW7 530 aa9.02□□□□□ -0.97
CDHR3-208ENST00000471910 WDR4P57081 412 aaKnown RBP9.02□□□□□ -0.97
CDHR3-208ENST00000471910 TSGA10IPQ3SY00 556 aa9.02□□□□□ -0.97
CDHR3-208ENST00000471910 PKDCCQ504Y2 493 aa9.02□□□□□ -0.97
CDHR3-208ENST00000471910 TRAF7Q6Q0C0 670 aa9.02□□□□□ -0.97
CDHR3-208ENST00000471910 USP17L2Q6R6M4 530 aa9.02□□□□□ -0.97
CDHR3-208ENST00000471910 USP17L1Q7RTZ2 530 aa9.02□□□□□ -0.97
CDHR3-208ENST00000471910 TMPRSS4Q9NRS4 437 aa9.02□□□□□ -0.97
CDHR3-208ENST00000471910 NOD1Q9Y239 953 aa9.02□□□□□ -0.97
CDHR3-208ENST00000471910 DGAT1O75907 488 aa9.01□□□□□ -0.97
CDHR3-208ENST00000471910 NCOA4Q13772 614 aa9.01□□□□□ -0.97
CDHR3-208ENST00000471910 CFAP70Q5T0N1 1121 aa9.01□□□□□ -0.97
CDHR3-208ENST00000471910 CC2D2BQ6DHV5 1058 aa9.01□□□□□ -0.97
CDHR3-208ENST00000471910 DEPDC4Q8N2C3 294 aa9.01□□□□□ -0.97
CDHR3-208ENST00000471910 IRX2Q9BZI1 471 aaPredicted RBP9.01□□□□□ -0.97
CDHR3-208ENST00000471910 VRTNQ9H8Y1 702 aa9.01□□□□□ -0.97
CDHR3-208ENST00000471910 ZIC2O95409 532 aaPredicted RBP9□□□□□ -0.97
CDHR3-208ENST00000471910 TRIM50Q86XT4 487 aa9□□□□□ -0.97
CDHR3-208ENST00000471910 ZNF784Q8NCA9 323 aaPredicted RBP9□□□□□ -0.97
CDHR3-208ENST00000471910 HPS1Q92902 700 aa9□□□□□ -0.97
CDHR3-208ENST00000471910 CDCA7Q9BWT1 371 aaPredicted RBP9□□□□□ -0.97
CDHR3-208ENST00000471910 ATP5J2-PTCD1G3V325 749 aa8.99□□□□□ -0.97
CDHR3-208ENST00000471910 ERVK-9P63128 1117 aa8.99□□□□□ -0.97
CDHR3-208ENST00000471910 CYLDQ9NQC7 956 aa8.99□□□□□ -0.97
CDHR3-208ENST00000471910 MKRN1Q9UHC7 482 aaKnown RBP8.99□□□□□ -0.97
CDHR3-208ENST00000471910 ACIN1Q9UKV3 1341 aaKnown RBP8.99□□□□□ -0.97
CDHR3-208ENST00000471910 PPP1R15AO75807 674 aaPredicted RBP8.98□□□□□ -0.97
CDHR3-208ENST00000471910 ATP1A2P50993 1020 aa8.98□□□□□ -0.97
CDHR3-208ENST00000471910 ITPKCQ96DU7 683 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms