RNA–Protein interactions for RNA: ENST00000471862.1

COL4A3-205, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 5

Gene COL4A3, Length 755 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-205ENST00000471862 AXIN2Q9Y2T1 843 aa16.27■□□□□ 0.2
COL4A3-205ENST00000471862 USP47Q96K76 1375 aa16.26■□□□□ 0.19
COL4A3-205ENST00000471862 SLC24A1O60721 1099 aa16.26■□□□□ 0.19
COL4A3-205ENST00000471862 HDGFL2Q7Z4V5 671 aaPredicted RBP16.26■□□□□ 0.19
COL4A3-205ENST00000471862 DISP2A7MBM2 1401 aa16.26■□□□□ 0.19
COL4A3-205ENST00000471862 ZBTB7CA1YPR0 619 aa16.25■□□□□ 0.19
COL4A3-205ENST00000471862 NME9Q86XW9 330 aa16.25■□□□□ 0.19
COL4A3-205ENST00000471862 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.25■□□□□ 0.19
COL4A3-205ENST00000471862 OVOS2A0A0J9YW53 1432 aa16.25■□□□□ 0.19
COL4A3-205ENST00000471862 OVOS2Q6IE36 1432 aa16.25■□□□□ 0.19
COL4A3-205ENST00000471862 WDR17Q8IZU2 1322 aa16.24■□□□□ 0.19
COL4A3-205ENST00000471862 LRRC37A3O60309 1634 aa16.24■□□□□ 0.19
COL4A3-205ENST00000471862 LTN1O94822 1766 aa16.24■□□□□ 0.19
COL4A3-205ENST00000471862 TERF2IPQ9NYB0 399 aa16.24■□□□□ 0.19
COL4A3-205ENST00000471862 SOX12O15370 315 aa16.23■□□□□ 0.19
COL4A3-205ENST00000471862 PEAK1Q9H792 1746 aa16.22■□□□□ 0.19
COL4A3-205ENST00000471862 BAG6P46379 1132 aa16.22■□□□□ 0.19
COL4A3-205ENST00000471862 FAM196AQ6ZSG2 479 aa16.22■□□□□ 0.19
COL4A3-205ENST00000471862 PCGF6Q9BYE7 350 aa16.22■□□□□ 0.19
COL4A3-205ENST00000471862 PDE3BQ13370 1112 aa16.2■□□□□ 0.18
COL4A3-205ENST00000471862 TOM1L2Q6ZVM7 507 aa16.2■□□□□ 0.18
COL4A3-205ENST00000471862 ANKRD36BQ8N2N9 1353 aa16.2■□□□□ 0.18
COL4A3-205ENST00000471862 TMF1P82094 1093 aa16.19■□□□□ 0.18
COL4A3-205ENST00000471862 CARD10Q9BWT7 1032 aa16.19■□□□□ 0.18
COL4A3-205ENST00000471862 SBF2Q86WG5 1849 aa16.19■□□□□ 0.18
COL4A3-205ENST00000471862 MYOM1P52179 1685 aa16.18■□□□□ 0.18
COL4A3-205ENST00000471862 TRIM37O94972 964 aa16.18■□□□□ 0.18
COL4A3-205ENST00000471862 EN1Q05925 392 aaPredicted RBP16.18■□□□□ 0.18
COL4A3-205ENST00000471862 SRCAPQ6ZRS2 3230 aa16.17■□□□□ 0.18
COL4A3-205ENST00000471862 OVOS2A0A0G2JMS6 1433 aa16.17■□□□□ 0.18
COL4A3-205ENST00000471862 RREB1Q92766 1687 aa16.17■□□□□ 0.18
COL4A3-205ENST00000471862 ERBB3P21860 1342 aa16.17■□□□□ 0.18
COL4A3-205ENST00000471862 CCDC7Q96M83 1385 aa16.16■□□□□ 0.18
COL4A3-205ENST00000471862 CSB-PGBD3P0DP91 1061 aa16.15■□□□□ 0.18
COL4A3-205ENST00000471862 DDB1Q16531 1140 aa16.15■□□□□ 0.18
COL4A3-205ENST00000471862 CAMKK2Q96RR4 588 aa16.15■□□□□ 0.18
COL4A3-205ENST00000471862 CDCA7Q9BWT1 371 aaPredicted RBP16.15■□□□□ 0.18
COL4A3-205ENST00000471862 BCL9O00512 1426 aa16.14■□□□□ 0.17
COL4A3-205ENST00000471862 C11orf95C9JLR9 678 aaPredicted RBP16.14■□□□□ 0.17
COL4A3-205ENST00000471862 EZH2Q15910 746 aaKnown RBP16.14■□□□□ 0.17
COL4A3-205ENST00000471862 PARD3Q8TEW0 1356 aa16.13■□□□□ 0.17
COL4A3-205ENST00000471862 CDCA8Q53HL2 280 aa16.13■□□□□ 0.17
COL4A3-205ENST00000471862 FAM208AQ9UK61 1670 aaKnown RBP16.13■□□□□ 0.17
COL4A3-205ENST00000471862 NUP188Q5SRE5 1749 aa16.13■□□□□ 0.17
COL4A3-205ENST00000471862 RGPD3A6NKT7 1758 aaPredicted RBP16.13■□□□□ 0.17
COL4A3-205ENST00000471862 RGPD4Q7Z3J3 1758 aa16.13■□□□□ 0.17
COL4A3-205ENST00000471862 KIF20BQ96Q89 1820 aa16.12■□□□□ 0.17
COL4A3-205ENST00000471862 TNS2Q63HR2 1409 aa16.12■□□□□ 0.17
COL4A3-205ENST00000471862 APBA3O96018 575 aa16.12■□□□□ 0.17
COL4A3-205ENST00000471862 MARCH10Q8NA82 808 aaPredicted RBP16.12■□□□□ 0.17
COL4A3-205ENST00000471862 COG3Q96JB2 828 aa16.12■□□□□ 0.17
COL4A3-205ENST00000471862 ANKRD24Q8TF21 1146 aa16.11■□□□□ 0.17
COL4A3-205ENST00000471862 IP6K1Q92551 441 aa16.11■□□□□ 0.17
COL4A3-205ENST00000471862 LRP5O75197 1615 aa16.11■□□□□ 0.17
COL4A3-205ENST00000471862 FYB1O15117 783 aa16.1■□□□□ 0.17
COL4A3-205ENST00000471862 MAP3K19Q56UN5 1328 aa16.1■□□□□ 0.17
COL4A3-205ENST00000471862 CCER1Q8TC90 406 aaPredicted RBP16.09■□□□□ 0.17
COL4A3-205ENST00000471862 PSDA5PKW4 1024 aaPredicted RBP16.08■□□□□ 0.16
COL4A3-205ENST00000471862 EXOC5O00471 708 aa16.08■□□□□ 0.16
COL4A3-205ENST00000471862 FBLN1P23142 703 aa16.08■□□□□ 0.16
COL4A3-205ENST00000471862 NLRP2Q9NX02 1062 aa16.08■□□□□ 0.16
COL4A3-205ENST00000471862 RGPD2P0DJD1 1756 aa16.08■□□□□ 0.16
COL4A3-205ENST00000471862 HOXC9P31274 260 aa16.07■□□□□ 0.16
COL4A3-205ENST00000471862 CARD14Q9BXL6 1004 aa16.07■□□□□ 0.16
COL4A3-205ENST00000471862 GGNBP2Q9H3C7 697 aa16.07■□□□□ 0.16
COL4A3-205ENST00000471862 RTL1A6NKG5 1358 aa16.07■□□□□ 0.16
COL4A3-205ENST00000471862 NSD3Q9BZ95 1437 aa16.06■□□□□ 0.16
COL4A3-205ENST00000471862 IL2RBP14784 551 aa16.06■□□□□ 0.16
COL4A3-205ENST00000471862 PTF1AQ7RTS3 328 aa16.06■□□□□ 0.16
COL4A3-205ENST00000471862 NHSQ6T4R5 1651 aa16.05■□□□□ 0.16
COL4A3-205ENST00000471862 PLSCR1O15162 318 aa16.05■□□□□ 0.16
COL4A3-205ENST00000471862 R3HDM1Q15032 1099 aaKnown RBP16.05■□□□□ 0.16
COL4A3-205ENST00000471862 BCL11BQ9C0K0 894 aaPredicted RBP16.05■□□□□ 0.16
COL4A3-205ENST00000471862 HSPA5P11021 654 aaKnown RBP16.03■□□□□ 0.16
COL4A3-205ENST00000471862 AMPHP49418 695 aa16.03■□□□□ 0.16
COL4A3-205ENST00000471862 EIF4G2P78344 907 aaKnown RBP eCLIP16.03■□□□□ 0.16
COL4A3-205ENST00000471862 RRS1Q15050 365 aaKnown RBP16.03■□□□□ 0.16
COL4A3-205ENST00000471862 SHANK3Q9BYB0 1731 aa16.02■□□□□ 0.16
COL4A3-205ENST00000471862 LTV1Q96GA3 475 aaPredicted RBP16.02■□□□□ 0.16
COL4A3-205ENST00000471862 ANKRD26Q9UPS8 1709 aa16.02■□□□□ 0.15
COL4A3-205ENST00000471862 KIF24Q5T7B8 1368 aa16.01■□□□□ 0.15
COL4A3-205ENST00000471862 INSRP06213 1382 aa16■□□□□ 0.15
COL4A3-205ENST00000471862 MEGF6O75095 1541 aa15.99■□□□□ 0.15
COL4A3-205ENST00000471862 BTAF1O14981 1849 aa15.99■□□□□ 0.15
COL4A3-205ENST00000471862 KCNQ2O43526 872 aa15.99■□□□□ 0.15
COL4A3-205ENST00000471862 PROM2Q8N271 834 aa15.99■□□□□ 0.15
COL4A3-205ENST00000471862 FLT4P35916 1363 aa15.99■□□□□ 0.15
COL4A3-205ENST00000471862 NBPF14Q5TI25 921 aa15.98■□□□□ 0.15
COL4A3-205ENST00000471862 MAP2P11137 1827 aaKnown RBP15.98■□□□□ 0.15
COL4A3-205ENST00000471862 KAT6BQ8WYB5 2073 aa15.98■□□□□ 0.15
COL4A3-205ENST00000471862 HSP90AB2PQ58FF8 381 aa15.97■□□□□ 0.15
COL4A3-205ENST00000471862 NBPF6Q5VWK0 638 aa15.97■□□□□ 0.15
COL4A3-205ENST00000471862 NBPF4Q96M43 638 aa15.97■□□□□ 0.15
COL4A3-205ENST00000471862 ANO8Q9HCE9 1232 aaPredicted RBP15.97■□□□□ 0.15
COL4A3-205ENST00000471862 CGNL1Q0VF96 1302 aa15.96■□□□□ 0.15
COL4A3-205ENST00000471862 SMG6Q86US8 1419 aaKnown RBP15.96■□□□□ 0.15
COL4A3-205ENST00000471862 ACSBG1Q96GR2 724 aa15.96■□□□□ 0.15
COL4A3-205ENST00000471862 CASZ1Q86V15 1759 aa15.95■□□□□ 0.14
COL4A3-205ENST00000471862 NCAPD2Q15021 1401 aa15.95■□□□□ 0.14
COL4A3-205ENST00000471862 DOT1LQ8TEK3 1739 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms