RNA–Protein interactions for RNA: ENST00000471423.1

VPS72-204, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 2

Gene VPS72, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-204ENST00000471423 RGS12O14924 1447 aa24.39■■□□□ 1.5
VPS72-204ENST00000471423 ABCC6O95255 1503 aa24.39■■□□□ 1.49
VPS72-204ENST00000471423 AXIN2Q9Y2T1 843 aa24.37■■□□□ 1.49
VPS72-204ENST00000471423 ANKRD26Q9UPS8 1709 aa24.37■■□□□ 1.49
VPS72-204ENST00000471423 RGPD5Q99666 1765 aa24.37■■□□□ 1.49
VPS72-204ENST00000471423 FBLN1P23142 703 aa24.36■■□□□ 1.49
VPS72-204ENST00000471423 EVA1CP58658 441 aa24.36■■□□□ 1.49
VPS72-204ENST00000471423 SPATA31A5Q5VU36 1347 aa24.35■■□□□ 1.49
VPS72-204ENST00000471423 SPATA31A7Q8IWB4 1347 aa24.35■■□□□ 1.49
VPS72-204ENST00000471423 LARP1Q6PKG0 1096 aaKnown RBP24.34■■□□□ 1.49
VPS72-204ENST00000471423 KNSTRNQ9Y448 316 aa24.34■■□□□ 1.49
VPS72-204ENST00000471423 MAP3K19Q56UN5 1328 aa24.34■■□□□ 1.49
VPS72-204ENST00000471423 NSD2O96028 1365 aa24.32■■□□□ 1.48
VPS72-204ENST00000471423 RRS1Q15050 365 aaKnown RBP24.32■■□□□ 1.48
VPS72-204ENST00000471423 SPATA31A1Q5TZJ5 1347 aa24.31■■□□□ 1.48
VPS72-204ENST00000471423 CRB1P82279 1406 aa24.3■■□□□ 1.48
VPS72-204ENST00000471423 USP35Q9P2H5 1018 aa24.29■■□□□ 1.48
VPS72-204ENST00000471423 WDR17Q8IZU2 1322 aa24.29■■□□□ 1.48
VPS72-204ENST00000471423 BLMP54132 1417 aaPredicted RBP24.28■■□□□ 1.48
VPS72-204ENST00000471423 PER1O15534 1290 aaPredicted RBP24.28■■□□□ 1.48
VPS72-204ENST00000471423 AMPHP49418 695 aa24.28■■□□□ 1.48
VPS72-204ENST00000471423 FAM98CQ17RN3 349 aaKnown RBP24.28■■□□□ 1.48
VPS72-204ENST00000471423 AMER1Q5JTC6 1135 aaPredicted RBP24.28■■□□□ 1.48
VPS72-204ENST00000471423 IP6K1Q92551 441 aa24.28■■□□□ 1.48
VPS72-204ENST00000471423 RTL1A6NKG5 1358 aa24.28■■□□□ 1.48
VPS72-204ENST00000471423 PEAK1Q9H792 1746 aa24.27■■□□□ 1.48
VPS72-204ENST00000471423 CSB-PGBD3P0DP91 1061 aa24.27■■□□□ 1.48
VPS72-204ENST00000471423 HOXC9P31274 260 aa24.27■■□□□ 1.48
VPS72-204ENST00000471423 ERBB3P21860 1342 aa24.27■■□□□ 1.48
VPS72-204ENST00000471423 TNNT2P45379 298 aaPredicted RBP24.26■■□□□ 1.47
VPS72-204ENST00000471423 TOM1L2Q6ZVM7 507 aa24.26■■□□□ 1.47
VPS72-204ENST00000471423 THSD7AQ9UPZ6 1657 aa24.25■■□□□ 1.47
VPS72-204ENST00000471423 A0A0G2JS52 829 aa24.25■■□□□ 1.47
VPS72-204ENST00000471423 MYT1Q01538 1121 aa24.25■■□□□ 1.47
VPS72-204ENST00000471423 SEPT12Q8IYM1 358 aa24.25■■□□□ 1.47
VPS72-204ENST00000471423 ONECUT3O60422 494 aaPredicted RBP24.24■■□□□ 1.47
VPS72-204ENST00000471423 ANKRD24Q8TF21 1146 aa24.24■■□□□ 1.47
VPS72-204ENST00000471423 EMILIN1Q9Y6C2 1016 aa24.24■■□□□ 1.47
VPS72-204ENST00000471423 MORC1Q86VD1 984 aa24.23■■□□□ 1.47
VPS72-204ENST00000471423 TCP11L2Q8N4U5 519 aa24.23■■□□□ 1.47
VPS72-204ENST00000471423 FLT4P35916 1363 aa24.23■■□□□ 1.47
VPS72-204ENST00000471423 BRWD3Q6RI45 1802 aa24.23■■□□□ 1.47
VPS72-204ENST00000471423 SOCS7O14512 581 aa24.22■■□□□ 1.47
VPS72-204ENST00000471423 MAP2P11137 1827 aaKnown RBP24.21■■□□□ 1.47
VPS72-204ENST00000471423 KIF24Q5T7B8 1368 aa24.21■■□□□ 1.47
VPS72-204ENST00000471423 LTV1Q96GA3 475 aaPredicted RBP24.21■■□□□ 1.47
VPS72-204ENST00000471423 CC2D1BQ5T0F9 858 aaKnown RBP24.2■■□□□ 1.46
VPS72-204ENST00000471423 BARGINQ6ZT62 677 aa24.2■■□□□ 1.46
VPS72-204ENST00000471423 THRAP3Q9Y2W1 955 aaKnown RBP24.2■■□□□ 1.46
VPS72-204ENST00000471423 FAM208AQ9UK61 1670 aaKnown RBP24.2■■□□□ 1.46
VPS72-204ENST00000471423 WNK3Q9BYP7 1800 aa24.19■■□□□ 1.46
VPS72-204ENST00000471423 PPM1GO15355 546 aaPredicted RBP24.19■■□□□ 1.46
VPS72-204ENST00000471423 CARD10Q9BWT7 1032 aa24.19■■□□□ 1.46
VPS72-204ENST00000471423 NLRP2Q9NX02 1062 aa24.19■■□□□ 1.46
VPS72-204ENST00000471423 POLKQ9UBT6 870 aa24.19■■□□□ 1.46
VPS72-204ENST00000471423 NPC1L1Q9UHC9 1359 aa24.18■■□□□ 1.46
VPS72-204ENST00000471423 CNGB1Q14028 1251 aaPredicted RBP24.18■■□□□ 1.46
VPS72-204ENST00000471423 INSRP06213 1382 aa24.17■■□□□ 1.46
VPS72-204ENST00000471423 HSP90AB2PQ58FF8 381 aa24.17■■□□□ 1.46
VPS72-204ENST00000471423 SMG6Q86US8 1419 aaKnown RBP24.17■■□□□ 1.46
VPS72-204ENST00000471423 PARP4Q9UKK3 1724 aaKnown RBP24.15■■□□□ 1.46
VPS72-204ENST00000471423 LRRC37A3O60309 1634 aa24.14■■□□□ 1.46
VPS72-204ENST00000471423 RGPD2P0DJD1 1756 aa24.14■■□□□ 1.46
VPS72-204ENST00000471423 KRT27Q7Z3Y8 459 aa24.14■■□□□ 1.45
VPS72-204ENST00000471423 DISP2A7MBM2 1401 aa24.13■■□□□ 1.45
VPS72-204ENST00000471423 EP400Q96L91 3159 aa24.12■■□□□ 1.45
VPS72-204ENST00000471423 DDX10Q13206 875 aaKnown RBP24.1■■□□□ 1.45
VPS72-204ENST00000471423 CDCA7Q9BWT1 371 aaPredicted RBP24.09■■□□□ 1.45
VPS72-204ENST00000471423 NBPF6Q5VWK0 638 aa24.08■■□□□ 1.45
VPS72-204ENST00000471423 NBPF4Q96M43 638 aa24.08■■□□□ 1.45
VPS72-204ENST00000471423 FAM182BQ5T319 152 aa24.07■■□□□ 1.44
VPS72-204ENST00000471423 USHBP1Q8N6Y0 703 aa24.07■■□□□ 1.44
VPS72-204ENST00000471423 IL2RBP14784 551 aa24.06■■□□□ 1.44
VPS72-204ENST00000471423 PDE3BQ13370 1112 aa24.06■■□□□ 1.44
VPS72-204ENST00000471423 TNS2Q63HR2 1409 aa24.05■■□□□ 1.44
VPS72-204ENST00000471423 EIF4A2Q14240 407 aaKnown RBP24.05■■□□□ 1.44
VPS72-204ENST00000471423 DDB1Q16531 1140 aa24.05■■□□□ 1.44
VPS72-204ENST00000471423 UPF1Q92900 1129 aaKnown RBP eCLIP24.05■■□□□ 1.44
VPS72-204ENST00000471423 MTHFSP49914 203 aa24.03■■□□□ 1.44
VPS72-204ENST00000471423 MEGF6O75095 1541 aa24.03■■□□□ 1.44
VPS72-204ENST00000471423 ZNF316A6NFI3 1004 aaPredicted RBP24.02■■□□□ 1.44
VPS72-204ENST00000471423 NCAPD2Q15021 1401 aa24.01■■□□□ 1.43
VPS72-204ENST00000471423 EYA1Q99502 592 aa24■■□□□ 1.43
VPS72-204ENST00000471423 EXOC5O00471 708 aa23.99■■□□□ 1.43
VPS72-204ENST00000471423 OVOS2A0A0G2JMS6 1433 aa23.98■■□□□ 1.43
VPS72-204ENST00000471423 PARD3Q8TEW0 1356 aa23.97■■□□□ 1.43
VPS72-204ENST00000471423 RAPGEF4Q8WZA2 1011 aa23.97■■□□□ 1.43
VPS72-204ENST00000471423 IGSF1Q8N6C5 1336 aa23.96■■□□□ 1.43
VPS72-204ENST00000471423 FAM196AQ6ZSG2 479 aa23.96■■□□□ 1.43
VPS72-204ENST00000471423 MARCH10Q8NA82 808 aaPredicted RBP23.96■■□□□ 1.43
VPS72-204ENST00000471423 COL3A1P02461 1466 aaPredicted RBP23.95■■□□□ 1.42
VPS72-204ENST00000471423 PPP2R1AP30153 589 aa23.95■■□□□ 1.42
VPS72-204ENST00000471423 RGPD1P0DJD0 1748 aa23.95■■□□□ 1.42
VPS72-204ENST00000471423 SHANK3Q9BYB0 1731 aa23.95■■□□□ 1.42
VPS72-204ENST00000471423 TATP17735 454 aaPredicted RBP23.94■■□□□ 1.42
VPS72-204ENST00000471423 IL13P35225 146 aa23.94■■□□□ 1.42
VPS72-204ENST00000471423 TNS1Q9HBL0 1735 aaKnown RBP23.91■■□□□ 1.42
VPS72-204ENST00000471423 ZCRB1Q8TBF4 217 aaKnown RBP23.91■■□□□ 1.42
VPS72-204ENST00000471423 PKD1L3Q7Z443 1732 aa23.9■■□□□ 1.42
VPS72-204ENST00000471423 DIAPH1O60610 1272 aaKnown RBP23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms