RNA–Protein interactions for RNA: ENST00000471414.1

COPS3-206, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-206ENST00000471414 PNMA1Q8ND90 353 aa7.46□□□□□ -1.22
COPS3-206ENST00000471414 ZFAND3Q9H8U3 227 aa7.46□□□□□ -1.22
COPS3-206ENST00000471414 ZIC2O95409 532 aaPredicted RBP7.45□□□□□ -1.22
COPS3-206ENST00000471414 ZBTB33Q86T24 672 aa7.45□□□□□ -1.22
COPS3-206ENST00000471414 CCDC116Q8IYX3 515 aa7.45□□□□□ -1.22
COPS3-206ENST00000471414 ESPNB1AK53 854 aa7.44□□□□□ -1.22
COPS3-206ENST00000471414 MRPL14Q6P1L8 145 aaKnown RBP7.44□□□□□ -1.22
COPS3-206ENST00000471414 MEIOBQ8N635 442 aa7.44□□□□□ -1.22
COPS3-206ENST00000471414 SLC10A4Q96EP9 437 aa7.44□□□□□ -1.22
COPS3-206ENST00000471414 KCTD15Q96SI1 283 aaPredicted RBP7.44□□□□□ -1.22
COPS3-206ENST00000471414 SNRKQ9NRH2 765 aa7.44□□□□□ -1.22
COPS3-206ENST00000471414 INTS6LQ5JSJ4 861 aaKnown RBP7.43□□□□□ -1.22
COPS3-206ENST00000471414 ZFP42Q96MM3 310 aa7.43□□□□□ -1.22
COPS3-206ENST00000471414 EMILIN1Q9Y6C2 1016 aa7.43□□□□□ -1.22
COPS3-206ENST00000471414 PPP1R26Q5T8A7 1209 aaPredicted RBP7.42□□□□□ -1.22
COPS3-206ENST00000471414 Q6ZVU0 165 aa7.42□□□□□ -1.22
COPS3-206ENST00000471414 ZBBXA8MT70 800 aa7.41□□□□□ -1.22
COPS3-206ENST00000471414 FBXO45P0C2W1 286 aa7.41□□□□□ -1.22
COPS3-206ENST00000471414 NFX1Q12986 1120 aaKnown RBP7.41□□□□□ -1.22
COPS3-206ENST00000471414 TREML4Q6UXN2 200 aa7.41□□□□□ -1.22
COPS3-206ENST00000471414 NBPF20Q3BBV1 942 aa7.4□□□□□ -1.22
COPS3-206ENST00000471414 LCE2CQ5TA81 110 aa7.4□□□□□ -1.22
COPS3-206ENST00000471414 PURBQ96QR8 312 aaKnown RBP7.4□□□□□ -1.22
COPS3-206ENST00000471414 NDUFB9Q9Y6M9 179 aa7.4□□□□□ -1.22
COPS3-206ENST00000471414 DHX9Q08211 1270 aaKnown RBP7.39□□□□□ -1.23
COPS3-206ENST00000471414 LINC00528Q8N1L1 170 aa7.39□□□□□ -1.23
COPS3-206ENST00000471414 NR1H3Q13133 447 aa7.38□□□□□ -1.23
COPS3-206ENST00000471414 SEPT12Q8IYM1 358 aa7.38□□□□□ -1.23
COPS3-206ENST00000471414 PGPEP1Q9NXJ5 209 aa7.38□□□□□ -1.23
COPS3-206ENST00000471414 APBB1O00213 710 aa7.37□□□□□ -1.23
COPS3-206ENST00000471414 SCARF1Q14162 830 aa7.37□□□□□ -1.23
COPS3-206ENST00000471414 DZIP3Q86Y13 1208 aaKnown RBP7.37□□□□□ -1.23
COPS3-206ENST00000471414 SOS2Q07890 1332 aaPredicted RBP7.36□□□□□ -1.23
COPS3-206ENST00000471414 TERTO14746 1132 aaKnown RBP7.36□□□□□ -1.23
COPS3-206ENST00000471414 LILRA1O75019 489 aa7.36□□□□□ -1.23
COPS3-206ENST00000471414 CBLBQ13191 982 aa7.36□□□□□ -1.23
COPS3-206ENST00000471414 TSEN34Q9BSV6 310 aaKnown RBP7.36□□□□□ -1.23
COPS3-206ENST00000471414 ERVH48-1M5A8F1 160 aa7.35□□□□□ -1.23
COPS3-206ENST00000471414 MCCD1P59942 119 aaPredicted RBP7.35□□□□□ -1.23
COPS3-206ENST00000471414 NPAS3Q8IXF0 933 aa7.35□□□□□ -1.23
COPS3-206ENST00000471414 KDF1Q8NAX2 398 aaPredicted RBP7.35□□□□□ -1.23
COPS3-206ENST00000471414 ZNF784Q8NCA9 323 aaPredicted RBP7.35□□□□□ -1.23
COPS3-206ENST00000471414 SPINT1O43278 529 aa7.34□□□□□ -1.23
COPS3-206ENST00000471414 WFS1O76024 890 aa7.34□□□□□ -1.23
COPS3-206ENST00000471414 IRF5Q13568 498 aa7.34□□□□□ -1.23
COPS3-206ENST00000471414 MCM6Q14566 821 aa7.34□□□□□ -1.23
COPS3-206ENST00000471414 TMPRSS4Q9NRS4 437 aa7.34□□□□□ -1.23
COPS3-206ENST00000471414 NXF1Q9UBU9 619 aaKnown RBP7.34□□□□□ -1.23
COPS3-206ENST00000471414 TBC1D2BQ9UPU7 963 aa7.34□□□□□ -1.23
COPS3-206ENST00000471414 GIGYF1O75420 1035 aaPredicted RBP7.33□□□□□ -1.24
COPS3-206ENST00000471414 C6orf118Q5T5N4 469 aa7.33□□□□□ -1.24
COPS3-206ENST00000471414 CCDC125Q86Z20 511 aa7.33□□□□□ -1.24
COPS3-206ENST00000471414 PCDHB9Q9Y5E1 797 aa7.33□□□□□ -1.24
COPS3-206ENST00000471414 UPP2O95045 317 aa7.32□□□□□ -1.24
COPS3-206ENST00000471414 BMP2P12643 396 aa7.32□□□□□ -1.24
COPS3-206ENST00000471414 ADD1P35611 737 aaKnown RBP7.32□□□□□ -1.24
COPS3-206ENST00000471414 DNMT3LQ9UJW3 386 aa7.32□□□□□ -1.24
COPS3-206ENST00000471414 SOBPA7XYQ1 873 aa7.31□□□□□ -1.24
COPS3-206ENST00000471414 H3BM21 787 aa7.31□□□□□ -1.24
COPS3-206ENST00000471414 WIPF1O43516 503 aa7.31□□□□□ -1.24
COPS3-206ENST00000471414 ADH1AP07327 375 aa7.3□□□□□ -1.24
COPS3-206ENST00000471414 ERVK-9P63128 1117 aa7.3□□□□□ -1.24
COPS3-206ENST00000471414 ZNF592Q92610 1267 aa7.3□□□□□ -1.24
COPS3-206ENST00000471414 TTLL8A6PVC2 850 aa7.29□□□□□ -1.24
COPS3-206ENST00000471414 VSIG8P0DPA2 414 aa7.29□□□□□ -1.24
COPS3-206ENST00000471414 AGBL1Q96MI9 1066 aa7.29□□□□□ -1.24
COPS3-206ENST00000471414 ZNF330Q9Y3S2 320 aaPredicted RBP7.29□□□□□ -1.24
COPS3-206ENST00000471414 RAB15P59190 212 aa7.28□□□□□ -1.24
COPS3-206ENST00000471414 RNF20Q5VTR2 975 aa7.28□□□□□ -1.24
COPS3-206ENST00000471414 MAN1A2O60476 641 aa7.27□□□□□ -1.25
COPS3-206ENST00000471414 PTGIRP43119 386 aa7.27□□□□□ -1.25
COPS3-206ENST00000471414 CTSOP43234 321 aaPredicted RBP7.27□□□□□ -1.25
COPS3-206ENST00000471414 PHTF2Q8N3S3 785 aa7.27□□□□□ -1.25
COPS3-206ENST00000471414 CYLDQ9NQC7 956 aa7.27□□□□□ -1.25
COPS3-206ENST00000471414 CEP126Q9P2H0 1117 aa7.27□□□□□ -1.25
COPS3-206ENST00000471414 CHIC2Q9UKJ5 165 aa7.27□□□□□ -1.25
COPS3-206ENST00000471414 ERBB4Q15303 1308 aa7.27□□□□□ -1.25
COPS3-206ENST00000471414 TRAK2O60296 914 aa7.26□□□□□ -1.25
COPS3-206ENST00000471414 RELBQ01201 579 aa7.26□□□□□ -1.25
COPS3-206ENST00000471414 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.26□□□□□ -1.25
COPS3-206ENST00000471414 FOXD4L5Q5VV16 416 aaPredicted RBP7.26□□□□□ -1.25
COPS3-206ENST00000471414 RNF217Q8TC41 542 aa7.26□□□□□ -1.25
COPS3-206ENST00000471414 INSM2Q96T92 566 aaPredicted RBP7.26□□□□□ -1.25
COPS3-206ENST00000471414 GDPD2Q9HCC8 539 aa7.26□□□□□ -1.25
COPS3-206ENST00000471414 PRM3Q9NNZ6 103 aa7.26□□□□□ -1.25
COPS3-206ENST00000471414 SCTRP47872 440 aa7.25□□□□□ -1.25
COPS3-206ENST00000471414 VEGFBP49765 207 aa7.25□□□□□ -1.25
COPS3-206ENST00000471414 CC2D2BQ6DHV5 1058 aa7.25□□□□□ -1.25
COPS3-206ENST00000471414 SLC16A10Q8TF71 515 aa7.25□□□□□ -1.25
COPS3-206ENST00000471414 TRIM52Q96A61 297 aa7.25□□□□□ -1.25
COPS3-206ENST00000471414 CCDC85AQ96PX6 553 aaPredicted RBP7.25□□□□□ -1.25
COPS3-206ENST00000471414 COG6Q9Y2V7 657 aa7.25□□□□□ -1.25
COPS3-206ENST00000471414 PPFIA3O75145 1194 aa7.24□□□□□ -1.25
COPS3-206ENST00000471414 TMEM132AQ24JP5 1023 aa7.24□□□□□ -1.25
COPS3-206ENST00000471414 IRF7Q92985 503 aa7.24□□□□□ -1.25
COPS3-206ENST00000471414 ZNF395Q9H8N7 513 aaPredicted RBP7.24□□□□□ -1.25
COPS3-206ENST00000471414 EIF4G2P78344 907 aaKnown RBP eCLIP7.23□□□□□ -1.25
COPS3-206ENST00000471414 PTSQ03393 145 aa7.23□□□□□ -1.25
COPS3-206ENST00000471414 OSBPL3Q9H4L5 887 aa7.23□□□□□ -1.25
COPS3-206ENST00000471414 SLC35F4A4IF30 521 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms