RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 CCNYL3P0C7X3 344 aa10.94□□□□□ -0.66
SMC5-202ENST00000471372 ANKMY2Q8IV38 441 aa10.94□□□□□ -0.66
SMC5-202ENST00000471372 CLP1Q92989 425 aaKnown RBP10.94□□□□□ -0.66
SMC5-202ENST00000471372 GPSM3Q9Y4H4 160 aa10.94□□□□□ -0.66
SMC5-202ENST00000471372 PCDHB3Q9Y5E6 796 aa10.94□□□□□ -0.66
SMC5-202ENST00000471372 NR1I2O75469 434 aa10.93□□□□□ -0.66
SMC5-202ENST00000471372 PPP4CP60510 307 aa10.93□□□□□ -0.66
SMC5-202ENST00000471372 CDCA7Q9BWT1 371 aaPredicted RBP10.93□□□□□ -0.66
SMC5-202ENST00000471372 EVA1BQ9NVM1 165 aa10.93□□□□□ -0.66
SMC5-202ENST00000471372 HPS5Q9UPZ3 1129 aa10.93□□□□□ -0.66
SMC5-202ENST00000471372 SCNN1AP37088 669 aa10.92□□□□□ -0.66
SMC5-202ENST00000471372 SERPINB4P48594 390 aa10.92□□□□□ -0.66
SMC5-202ENST00000471372 DPYDQ12882 1025 aa10.92□□□□□ -0.66
SMC5-202ENST00000471372 TSGA10IPQ3SY00 556 aa10.92□□□□□ -0.66
SMC5-202ENST00000471372 DNAJC14Q6Y2X3 702 aaPredicted RBP10.92□□□□□ -0.66
SMC5-202ENST00000471372 NUDT12Q9BQG2 462 aa10.92□□□□□ -0.66
SMC5-202ENST00000471372 DXOO77932 396 aaKnown RBP10.91□□□□□ -0.66
SMC5-202ENST00000471372 ATP2B4P23634 1241 aa10.91□□□□□ -0.66
SMC5-202ENST00000471372 BCAMP50895 628 aa10.91□□□□□ -0.66
SMC5-202ENST00000471372 OGFOD1Q8N543 542 aa10.91□□□□□ -0.66
SMC5-202ENST00000471372 ANKK1Q8NFD2 765 aa10.91□□□□□ -0.66
SMC5-202ENST00000471372 ADAM32Q8TC27 787 aa10.91□□□□□ -0.66
SMC5-202ENST00000471372 GPKOWQ92917 476 aaPredicted RBP eCLIP10.91□□□□□ -0.66
SMC5-202ENST00000471372 ZNF594Q96JF6 807 aaPredicted RBP10.91□□□□□ -0.66
SMC5-202ENST00000471372 CHIC2Q9UKJ5 165 aa10.91□□□□□ -0.66
SMC5-202ENST00000471372 LOC105371045A0A1W2PR82 267 aa10.9□□□□□ -0.66
SMC5-202ENST00000471372 SOWAHDA6NJG2 315 aa10.9□□□□□ -0.66
SMC5-202ENST00000471372 CLDN10P78369 228 aa10.9□□□□□ -0.66
SMC5-202ENST00000471372 IFFO2Q5TF58 517 aa10.9□□□□□ -0.66
SMC5-202ENST00000471372 TRAF7Q6Q0C0 670 aa10.9□□□□□ -0.66
SMC5-202ENST00000471372 FAM160A2Q8N612 972 aaPredicted RBP10.9□□□□□ -0.66
SMC5-202ENST00000471372 ARMC2Q8NEN0 867 aa10.9□□□□□ -0.66
SMC5-202ENST00000471372 RBM47A0AV96 593 aaKnown RBP10.89□□□□□ -0.67
SMC5-202ENST00000471372 SOWAHBA6NEL2 793 aa10.89□□□□□ -0.67
SMC5-202ENST00000471372 LZTS3O60299 673 aaPredicted RBP10.89□□□□□ -0.67
SMC5-202ENST00000471372 MCCD1P59942 119 aaPredicted RBP10.89□□□□□ -0.67
SMC5-202ENST00000471372 EML3Q32P44 896 aa10.89□□□□□ -0.67
SMC5-202ENST00000471372 MSS51Q4VC12 460 aa10.89□□□□□ -0.67
SMC5-202ENST00000471372 NOM1Q5C9Z4 860 aaKnown RBP10.89□□□□□ -0.67
SMC5-202ENST00000471372 ZNF592Q92610 1267 aa10.89□□□□□ -0.67
SMC5-202ENST00000471372 PRDM9Q9NQV7 894 aa10.89□□□□□ -0.67
SMC5-202ENST00000471372 MAP7D1Q3KQU3 841 aa10.88□□□□□ -0.67
SMC5-202ENST00000471372 NBPF14Q5TI25 921 aa10.88□□□□□ -0.67
SMC5-202ENST00000471372 TSR3Q9UJK0 312 aaKnown RBP10.88□□□□□ -0.67
SMC5-202ENST00000471372 ARHGAP9Q9BRR9 750 aa10.87□□□□□ -0.67
SMC5-202ENST00000471372 MMP16P51512 607 aa10.86□□□□□ -0.67
SMC5-202ENST00000471372 SWI5Q1ZZU3 235 aa10.86□□□□□ -0.67
SMC5-202ENST00000471372 SPSB2Q99619 263 aa10.86□□□□□ -0.67
SMC5-202ENST00000471372 DNAAF2Q9NVR5 837 aaKnown RBP10.86□□□□□ -0.67
SMC5-202ENST00000471372 KIAA1024Q9UPX6 916 aa10.86□□□□□ -0.67
SMC5-202ENST00000471372 DKK1O94907 266 aa10.85□□□□□ -0.67
SMC5-202ENST00000471372 CCDC85AQ96PX6 553 aaPredicted RBP10.85□□□□□ -0.67
SMC5-202ENST00000471372 A0A0G2JS52 829 aa10.84□□□□□ -0.67
SMC5-202ENST00000471372 SH3BP5LQ7L8J4 393 aa10.84□□□□□ -0.67
SMC5-202ENST00000471372 TRIM50Q86XT4 487 aa10.84□□□□□ -0.67
SMC5-202ENST00000471372 NOD1Q9Y239 953 aa10.84□□□□□ -0.67
SMC5-202ENST00000471372 ZBTB7BO15156 539 aaPredicted RBP10.83□□□□□ -0.68
SMC5-202ENST00000471372 RGS20O76081 388 aa10.83□□□□□ -0.68
SMC5-202ENST00000471372 ZBTB33Q86T24 672 aa10.83□□□□□ -0.68
SMC5-202ENST00000471372 PRMT3O60678 531 aa10.82□□□□□ -0.68
SMC5-202ENST00000471372 ERCC3P19447 782 aa10.82□□□□□ -0.68
SMC5-202ENST00000471372 ATP1A2P50993 1020 aa10.82□□□□□ -0.68
SMC5-202ENST00000471372 PTCRAQ6ISU1 281 aaPredicted RBP10.82□□□□□ -0.68
SMC5-202ENST00000471372 DZIP3Q86Y13 1208 aaKnown RBP10.82□□□□□ -0.68
SMC5-202ENST00000471372 LARGE2Q8N3Y3 721 aa10.82□□□□□ -0.68
SMC5-202ENST00000471372 KIAA1522Q9P206 1035 aaPredicted RBP10.82□□□□□ -0.68
SMC5-202ENST00000471372 BIN2Q9UBW5 565 aaPredicted RBP10.82□□□□□ -0.68
SMC5-202ENST00000471372 DOLKQ9UPQ8 538 aa10.82□□□□□ -0.68
SMC5-202ENST00000471372 MARSP56192 900 aaKnown RBP10.81□□□□□ -0.68
SMC5-202ENST00000471372 COPS2P61201 443 aa10.81□□□□□ -0.68
SMC5-202ENST00000471372 OXLD1Q5BKU9 147 aa10.81□□□□□ -0.68
SMC5-202ENST00000471372 SIX5Q8N196 739 aa10.81□□□□□ -0.68
SMC5-202ENST00000471372 C1orf216Q8TAB5 229 aa10.81□□□□□ -0.68
SMC5-202ENST00000471372 CARD14Q9BXL6 1004 aa10.81□□□□□ -0.68
SMC5-202ENST00000471372 UNC93B1Q9H1C4 597 aa10.81□□□□□ -0.68
SMC5-202ENST00000471372 GIGYF1O75420 1035 aaPredicted RBP10.8□□□□□ -0.68
SMC5-202ENST00000471372 PRIMPOLQ96LW4 560 aa10.8□□□□□ -0.68
SMC5-202ENST00000471372 WBP1LQ9NX94 342 aa10.8□□□□□ -0.68
SMC5-202ENST00000471372 MAGEB6P1A0A0J9YX57 407 aa10.79□□□□□ -0.68
SMC5-202ENST00000471372 TLL1O43897 1013 aa10.79□□□□□ -0.68
SMC5-202ENST00000471372 GTF2IP78347 998 aa10.79□□□□□ -0.68
SMC5-202ENST00000471372 OCLNQ16625 522 aa10.79□□□□□ -0.68
SMC5-202ENST00000471372 CCDC24Q8N4L8 307 aa10.79□□□□□ -0.68
SMC5-202ENST00000471372 MRRFQ96E11 262 aaKnown RBP10.79□□□□□ -0.68
SMC5-202ENST00000471372 IGSF5Q9NSI5 407 aa10.79□□□□□ -0.68
SMC5-202ENST00000471372 ZNF16P17020 682 aaPredicted RBP10.78□□□□□ -0.68
SMC5-202ENST00000471372 SEC13P55735 322 aa10.78□□□□□ -0.68
SMC5-202ENST00000471372 NYAP1Q6ZVC0 841 aa10.78□□□□□ -0.68
SMC5-202ENST00000471372 CXXC1Q9P0U4 656 aaPredicted RBP10.78□□□□□ -0.68
SMC5-202ENST00000471372 SFI1A8K8P3 1242 aa10.77□□□□□ -0.69
SMC5-202ENST00000471372 LGR5O75473 907 aa10.77□□□□□ -0.69
SMC5-202ENST00000471372 ITGBL1O95965 494 aaPredicted RBP10.77□□□□□ -0.69
SMC5-202ENST00000471372 CCDC102BQ68D86 513 aa10.77□□□□□ -0.69
SMC5-202ENST00000471372 SH3RF1Q7Z6J0 888 aa10.77□□□□□ -0.69
SMC5-202ENST00000471372 BCL2L13Q9BXK5 485 aa10.77□□□□□ -0.69
SMC5-202ENST00000471372 ABL1P00519 1130 aa10.76□□□□□ -0.69
SMC5-202ENST00000471372 ZNF211Q13398 564 aaPredicted RBP10.76□□□□□ -0.69
SMC5-202ENST00000471372 TAS1R3Q7RTX0 852 aa10.76□□□□□ -0.69
SMC5-202ENST00000471372 TPCN2Q8NHX9 752 aa10.76□□□□□ -0.69
SMC5-202ENST00000471372 SIRT1Q96EB6 747 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms