RNA–Protein interactions for RNA: ENST00000471247.5

CCNL1-214, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 3,671 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-214ENST00000471247 EMP3P54852 163 aa4.25□□□□□ -1.73
CCNL1-214ENST00000471247 TSR3Q9UJK0 312 aaKnown RBP4.25□□□□□ -1.73
CCNL1-214ENST00000471247 PPLO60437 1756 aa4.24□□□□□ -1.73
CCNL1-214ENST00000471247 ABCC1P33527 1531 aa4.24□□□□□ -1.73
CCNL1-214ENST00000471247 ATP10AO60312 1499 aa4.24□□□□□ -1.73
CCNL1-214ENST00000471247 RTL5Q5HYW3 569 aaPredicted RBP4.24□□□□□ -1.73
CCNL1-214ENST00000471247 DXOO77932 396 aaKnown RBP4.24□□□□□ -1.73
CCNL1-214ENST00000471247 IRF5Q13568 498 aa4.24□□□□□ -1.73
CCNL1-214ENST00000471247 RETREG3Q86VR2 466 aa4.24□□□□□ -1.73
CCNL1-214ENST00000471247 ZFRQ96KR1 1074 aaKnown RBP4.24□□□□□ -1.73
CCNL1-214ENST00000471247 ELOAQ14241 798 aaKnown RBP4.24□□□□□ -1.73
CCNL1-214ENST00000471247 WASHC4Q2M389 1173 aa4.24□□□□□ -1.73
CCNL1-214ENST00000471247 KMT5BQ4FZB7 885 aa4.24□□□□□ -1.73
CCNL1-214ENST00000471247 PRDM15P57071 1507 aaPredicted RBP4.23□□□□□ -1.73
CCNL1-214ENST00000471247 LZTS3O60299 673 aaPredicted RBP4.23□□□□□ -1.73
CCNL1-214ENST00000471247 ITGBL1O95965 494 aaPredicted RBP4.23□□□□□ -1.73
CCNL1-214ENST00000471247 MTMR2Q13614 643 aa4.23□□□□□ -1.73
CCNL1-214ENST00000471247 CCDC136Q96JN2 1154 aa4.23□□□□□ -1.73
CCNL1-214ENST00000471247 ALG2Q9H553 416 aa4.23□□□□□ -1.73
CCNL1-214ENST00000471247 C1orf115Q9H7X2 142 aa4.23□□□□□ -1.73
CCNL1-214ENST00000471247 LMTK2Q8IWU2 1503 aa4.23□□□□□ -1.73
CCNL1-214ENST00000471247 DUOX2Q9NRD8 1548 aa4.23□□□□□ -1.73
CCNL1-214ENST00000471247 FAM161AQ3B820 660 aa4.23□□□□□ -1.73
CCNL1-214ENST00000471247 TRAIPQ9BWF2 469 aa4.23□□□□□ -1.73
CCNL1-214ENST00000471247 NDUFB9Q9Y6M9 179 aa4.23□□□□□ -1.73
CCNL1-214ENST00000471247 ANKRD26Q9UPS8 1709 aa4.23□□□□□ -1.73
CCNL1-214ENST00000471247 CLTCQ00610 1675 aaKnown RBP4.23□□□□□ -1.73
CCNL1-214ENST00000471247 SHPRHQ149N8 1683 aa4.22□□□□□ -1.73
CCNL1-214ENST00000471247 JUNDP17535 347 aa4.22□□□□□ -1.73
CCNL1-214ENST00000471247 PTPRNQ16849 979 aa4.22□□□□□ -1.73
CCNL1-214ENST00000471247 NUTM1Q86Y26 1132 aa4.22□□□□□ -1.73
CCNL1-214ENST00000471247 MADDQ8WXG6 1647 aa4.22□□□□□ -1.73
CCNL1-214ENST00000471247 SLC4A3P48751 1232 aa4.22□□□□□ -1.73
CCNL1-214ENST00000471247 SERPINA10Q9UK55 444 aa4.22□□□□□ -1.73
CCNL1-214ENST00000471247 CRYBG1Q9Y4K1 1723 aa4.22□□□□□ -1.73
CCNL1-214ENST00000471247 PPP1R15AO75807 674 aaPredicted RBP4.22□□□□□ -1.73
CCNL1-214ENST00000471247 ZFYVE16Q7Z3T8 1539 aa4.21□□□□□ -1.73
CCNL1-214ENST00000471247 NDUFV2P19404 249 aa4.21□□□□□ -1.74
CCNL1-214ENST00000471247 PCDHB15Q9Y5E8 787 aa4.21□□□□□ -1.74
CCNL1-214ENST00000471247 CFAP99D6REC4 459 aa4.21□□□□□ -1.74
CCNL1-214ENST00000471247 SAMD7Q7Z3H4 446 aa4.21□□□□□ -1.74
CCNL1-214ENST00000471247 PLEKHM2Q8IWE5 1019 aa4.21□□□□□ -1.74
CCNL1-214ENST00000471247 KNDC1Q76NI1 1749 aa4.21□□□□□ -1.74
CCNL1-214ENST00000471247 FDX1P10109 184 aa4.2□□□□□ -1.74
CCNL1-214ENST00000471247 MARVELD3Q96A59 401 aa4.2□□□□□ -1.74
CCNL1-214ENST00000471247 NRXN1Q9ULB1 1477 aa4.2□□□□□ -1.74
CCNL1-214ENST00000471247 DIP2BQ9P265 1576 aa4.2□□□□□ -1.74
CCNL1-214ENST00000471247 SUPT5HO00267 1087 aaKnown RBP4.2□□□□□ -1.74
CCNL1-214ENST00000471247 SNRKQ9NRH2 765 aa4.2□□□□□ -1.74
CCNL1-214ENST00000471247 NRXN3Q9Y4C0 1643 aa4.2□□□□□ -1.74
CCNL1-214ENST00000471247 FAM135AQ9P2D6 1515 aa4.2□□□□□ -1.74
CCNL1-214ENST00000471247 CFAP74Q9C0B2 1584 aa4.2□□□□□ -1.74
CCNL1-214ENST00000471247 MYO5BQ9ULV0 1848 aa4.2□□□□□ -1.74
CCNL1-214ENST00000471247 NR1I2O75469 434 aa4.2□□□□□ -1.74
CCNL1-214ENST00000471247 CFHP08603 1231 aa4.2□□□□□ -1.74
CCNL1-214ENST00000471247 USP17L8P0C7I0 530 aa4.2□□□□□ -1.74
CCNL1-214ENST00000471247 ZNF592Q92610 1267 aa4.2□□□□□ -1.74
CCNL1-214ENST00000471247 RIMBP3CA6NJZ7 1639 aa4.19□□□□□ -1.74
CCNL1-214ENST00000471247 RIMBP3BA6NNM3 1639 aa4.19□□□□□ -1.74
CCNL1-214ENST00000471247 RIMBP3Q9UFD9 1639 aa4.19□□□□□ -1.74
CCNL1-214ENST00000471247 QPCTQ16769 361 aa4.19□□□□□ -1.74
CCNL1-214ENST00000471247 THSD4Q6ZMP0 1018 aa4.19□□□□□ -1.74
CCNL1-214ENST00000471247 PRM3Q9NNZ6 103 aa4.19□□□□□ -1.74
CCNL1-214ENST00000471247 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.19□□□□□ -1.74
CCNL1-214ENST00000471247 TET3O43151 1660 aa4.19□□□□□ -1.74
CCNL1-214ENST00000471247 TEX14Q8IWB6 1497 aa4.19□□□□□ -1.74
CCNL1-214ENST00000471247 DDX11L8A8MPP1 907 aa4.19□□□□□ -1.74
CCNL1-214ENST00000471247 PDE4CQ08493 712 aa4.19□□□□□ -1.74
CCNL1-214ENST00000471247 HOMEZQ8IX15 550 aa4.19□□□□□ -1.74
CCNL1-214ENST00000471247 PHTF2Q8N3S3 785 aa4.19□□□□□ -1.74
CCNL1-214ENST00000471247 LRCH3Q96II8 777 aa4.19□□□□□ -1.74
CCNL1-214ENST00000471247 C1QTNF2Q9BXJ5 285 aa4.19□□□□□ -1.74
CCNL1-214ENST00000471247 HECW2Q9P2P5 1572 aa4.19□□□□□ -1.74
CCNL1-214ENST00000471247 CARMIL1Q5VZK9 1371 aa4.19□□□□□ -1.74
CCNL1-214ENST00000471247 MIA2Q96PC5 1412 aa4.18□□□□□ -1.74
CCNL1-214ENST00000471247 NEUROD1Q13562 356 aa4.18□□□□□ -1.74
CCNL1-214ENST00000471247 TRMT44Q8IYL2 757 aaKnown RBP4.18□□□□□ -1.74
CCNL1-214ENST00000471247 MRPL50Q8N5N7 158 aaKnown RBP4.18□□□□□ -1.74
CCNL1-214ENST00000471247 FAM163AQ96GL9 167 aaPredicted RBP4.18□□□□□ -1.74
CCNL1-214ENST00000471247 USP32Q8NFA0 1604 aa4.18□□□□□ -1.74
CCNL1-214ENST00000471247 HDGFP51858 240 aaKnown RBP4.18□□□□□ -1.74
CCNL1-214ENST00000471247 TJAP1Q5JTD0 557 aa4.18□□□□□ -1.74
CCNL1-214ENST00000471247 ATP10BO94823 1461 aa4.18□□□□□ -1.74
CCNL1-214ENST00000471247 PZPP20742 1482 aa4.18□□□□□ -1.74
CCNL1-214ENST00000471247 FMNL1O95466 1100 aaPredicted RBP4.18□□□□□ -1.74
CCNL1-214ENST00000471247 FAM160A2Q8N612 972 aaPredicted RBP4.18□□□□□ -1.74
CCNL1-214ENST00000471247 ARMC2Q8NEN0 867 aa4.18□□□□□ -1.74
CCNL1-214ENST00000471247 ANKK1Q8NFD2 765 aa4.18□□□□□ -1.74
CCNL1-214ENST00000471247 PHLDB1Q86UU1 1377 aa4.18□□□□□ -1.74
CCNL1-214ENST00000471247 HFM1A2PYH4 1435 aa4.18□□□□□ -1.74
CCNL1-214ENST00000471247 CDK13Q14004 1512 aaKnown RBP4.17□□□□□ -1.74
CCNL1-214ENST00000471247 GPATCH8Q9UKJ3 1502 aaKnown RBP4.17□□□□□ -1.74
CCNL1-214ENST00000471247 POTEMA6NI47 508 aa4.17□□□□□ -1.74
CCNL1-214ENST00000471247 APLP1P51693 650 aa4.17□□□□□ -1.74
CCNL1-214ENST00000471247 PDXDC2PQ6P474 469 aa4.17□□□□□ -1.74
CCNL1-214ENST00000471247 ZNF142P52746 1687 aaPredicted RBP4.17□□□□□ -1.74
CCNL1-214ENST00000471247 TOPAZ1Q8N9V7 1692 aa4.17□□□□□ -1.74
CCNL1-214ENST00000471247 USB1Q9BQ65 265 aaKnown RBP4.17□□□□□ -1.74
CCNL1-214ENST00000471247 EVA1BQ9NVM1 165 aa4.17□□□□□ -1.74
CCNL1-214ENST00000471247 ACIN1Q9UKV3 1341 aaKnown RBP4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms