RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 EVA1CP58658 441 aa9.1□□□□□ -0.95
VARS-222ENST00000470953 CFAP44Q96MT7 982 aa9.1□□□□□ -0.95
VARS-222ENST00000470953 DLL1O00548 723 aa9.09□□□□□ -0.95
VARS-222ENST00000470953 SMC1BQ8NDV3 1235 aa9.09□□□□□ -0.95
VARS-222ENST00000470953 PLEKHH1Q9ULM0 1364 aa9.09□□□□□ -0.95
VARS-222ENST00000470953 PRPF38BQ5VTL8 546 aaKnown RBP9.08□□□□□ -0.96
VARS-222ENST00000470953 MARCH10Q8NA82 808 aaPredicted RBP9.08□□□□□ -0.96
VARS-222ENST00000470953 AKT1S1Q96B36 256 aa9.08□□□□□ -0.96
VARS-222ENST00000470953 MKRN1Q9UHC7 482 aaKnown RBP9.08□□□□□ -0.96
VARS-222ENST00000470953 THRAP3Q9Y2W1 955 aaKnown RBP9.08□□□□□ -0.96
VARS-222ENST00000470953 AKAP12Q02952 1782 aa9.07□□□□□ -0.96
VARS-222ENST00000470953 KCPQ6ZWJ8 1503 aa9.07□□□□□ -0.96
VARS-222ENST00000470953 CLTCL1P53675 1640 aa9.07□□□□□ -0.96
VARS-222ENST00000470953 ZC3H6P61129 1189 aaKnown RBP9.07□□□□□ -0.96
VARS-222ENST00000470953 AIDAQ96BJ3 306 aa9.07□□□□□ -0.96
VARS-222ENST00000470953 LRRC4BQ9NT99 713 aa9.07□□□□□ -0.96
VARS-222ENST00000470953 CD2APQ9Y5K6 639 aa9.07□□□□□ -0.96
VARS-222ENST00000470953 IFT172Q9UG01 1749 aa9.07□□□□□ -0.96
VARS-222ENST00000470953 IGSF1Q8N6C5 1336 aa9.06□□□□□ -0.96
VARS-222ENST00000470953 BCL9O00512 1426 aa9.06□□□□□ -0.96
VARS-222ENST00000470953 C10orf71Q711Q0 1435 aa9.06□□□□□ -0.96
VARS-222ENST00000470953 DDB1Q16531 1140 aa9.06□□□□□ -0.96
VARS-222ENST00000470953 NUP155O75694 1391 aa9.06□□□□□ -0.96
VARS-222ENST00000470953 VPS8Q8N3P4 1428 aa9.05□□□□□ -0.96
VARS-222ENST00000470953 PXDNLA1KZ92 1463 aa9.05□□□□□ -0.96
VARS-222ENST00000470953 HSPA8P11142 646 aaKnown RBP9.05□□□□□ -0.96
VARS-222ENST00000470953 MSL1Q68DK7 614 aa9.05□□□□□ -0.96
VARS-222ENST00000470953 RRAGCQ9HB90 399 aa9.05□□□□□ -0.96
VARS-222ENST00000470953 STK26Q9P289 416 aa9.05□□□□□ -0.96
VARS-222ENST00000470953 LMO7Q8WWI1 1683 aa9.04□□□□□ -0.96
VARS-222ENST00000470953 NHSQ6T4R5 1651 aa9.04□□□□□ -0.96
VARS-222ENST00000470953 VGFO15240 615 aaPredicted RBP9.03□□□□□ -0.96
VARS-222ENST00000470953 FAM50AQ14320 339 aaKnown RBP9.03□□□□□ -0.96
VARS-222ENST00000470953 TNRC6CQ9HCJ0 1690 aaKnown RBP9.02□□□□□ -0.97
VARS-222ENST00000470953 LOC105371045A0A1W2PR82 267 aa9.02□□□□□ -0.97
VARS-222ENST00000470953 TFCP2L1Q9NZI6 479 aa9.02□□□□□ -0.97
VARS-222ENST00000470953 WNK3Q9BYP7 1800 aa9.02□□□□□ -0.97
VARS-222ENST00000470953 PKD1L3Q7Z443 1732 aa9.02□□□□□ -0.97
VARS-222ENST00000470953 WBP1LQ9NX94 342 aa9.01□□□□□ -0.97
VARS-222ENST00000470953 BTAF1O14981 1849 aa9.01□□□□□ -0.97
VARS-222ENST00000470953 TMEM132EQ6IEE7 984 aa9□□□□□ -0.97
VARS-222ENST00000470953 ACSBG1Q96GR2 724 aa9□□□□□ -0.97
VARS-222ENST00000470953 COL5A2P05997 1499 aaPredicted RBP9□□□□□ -0.97
VARS-222ENST00000470953 KDM2BQ8NHM5 1336 aa9□□□□□ -0.97
VARS-222ENST00000470953 BRD4O60885 1362 aaPredicted RBP8.99□□□□□ -0.97
VARS-222ENST00000470953 CRB1P82279 1406 aa8.99□□□□□ -0.97
VARS-222ENST00000470953 MSH5O43196 834 aa8.99□□□□□ -0.97
VARS-222ENST00000470953 HIRIP3Q9BW71 556 aaPredicted RBP8.99□□□□□ -0.97
VARS-222ENST00000470953 CNTNAP1P78357 1384 aa8.99□□□□□ -0.97
VARS-222ENST00000470953 PLEKHG2Q9H7P9 1386 aa8.99□□□□□ -0.97
VARS-222ENST00000470953 VIRMAQ69YN4 1812 aaKnown RBP8.98□□□□□ -0.97
VARS-222ENST00000470953 PAK3O75914 559 aaPredicted RBP8.98□□□□□ -0.97
VARS-222ENST00000470953 KCNQ4P56696 695 aa8.98□□□□□ -0.97
VARS-222ENST00000470953 APLP2Q06481 763 aa8.98□□□□□ -0.97
VARS-222ENST00000470953 C9orf131Q5VYM1 1079 aa8.98□□□□□ -0.97
VARS-222ENST00000470953 COL23A1Q86Y22 540 aaPredicted RBP8.98□□□□□ -0.97
VARS-222ENST00000470953 ADGRF5Q8IZF2 1346 aa8.98□□□□□ -0.97
VARS-222ENST00000470953 PITPNM2Q9BZ72 1349 aa8.98□□□□□ -0.97
VARS-222ENST00000470953 ACIN1Q9UKV3 1341 aaKnown RBP8.98□□□□□ -0.97
VARS-222ENST00000470953 GPRASP1Q5JY77 1395 aa8.98□□□□□ -0.97
VARS-222ENST00000470953 ABCC11Q96J66 1382 aa8.98□□□□□ -0.97
VARS-222ENST00000470953 KNDC1Q76NI1 1749 aa8.97□□□□□ -0.97
VARS-222ENST00000470953 KIF1BO60333 1816 aa8.97□□□□□ -0.97
VARS-222ENST00000470953 CREBZFQ9NS37 354 aa8.97□□□□□ -0.97
VARS-222ENST00000470953 TRPM1Q7Z4N2 1603 aa8.97□□□□□ -0.97
VARS-222ENST00000470953 PIK3C2AO00443 1686 aa8.97□□□□□ -0.97
VARS-222ENST00000470953 VEGFBP49765 207 aa8.96□□□□□ -0.98
VARS-222ENST00000470953 HABP4Q5JVS0 413 aaKnown RBP8.96□□□□□ -0.98
VARS-222ENST00000470953 NUTM2GQ5VZR2 741 aa8.96□□□□□ -0.98
VARS-222ENST00000470953 ARHGAP27Q6ZUM4 889 aa8.96□□□□□ -0.98
VARS-222ENST00000470953 CUL9Q8IWT3 2517 aa8.96□□□□□ -0.98
VARS-222ENST00000470953 PPLO60437 1756 aa8.96□□□□□ -0.98
VARS-222ENST00000470953 SAFB2Q14151 953 aaKnown RBP eCLIP8.95□□□□□ -0.98
VARS-222ENST00000470953 MCOLN1Q9GZU1 580 aa8.95□□□□□ -0.98
VARS-222ENST00000470953 RPGRIP1LQ68CZ1 1315 aa8.95□□□□□ -0.98
VARS-222ENST00000470953 USP6P35125 1406 aa8.95□□□□□ -0.98
VARS-222ENST00000470953 SOX10P56693 466 aa8.93□□□□□ -0.98
VARS-222ENST00000470953 BCS1LQ9Y276 419 aa8.93□□□□□ -0.98
VARS-222ENST00000470953 ROCK1Q13464 1354 aa8.93□□□□□ -0.98
VARS-222ENST00000470953 ANKRD30BQ9BXX2 1392 aa8.93□□□□□ -0.98
VARS-222ENST00000470953 ANKARQ7Z5J8 1434 aa8.93□□□□□ -0.98
VARS-222ENST00000470953 QRICH2Q9H0J4 1663 aa8.93□□□□□ -0.98
VARS-222ENST00000470953 KIAA1551Q9HCM1 1747 aa8.93□□□□□ -0.98
VARS-222ENST00000470953 YTHDC2Q9H6S0 1430 aaKnown RBP8.92□□□□□ -0.98
VARS-222ENST00000470953 CPDO75976 1380 aa8.92□□□□□ -0.98
VARS-222ENST00000470953 PRR36Q9H6K5 1346 aa8.92□□□□□ -0.98
VARS-222ENST00000470953 SLC27A3Q5K4L6 730 aa8.92□□□□□ -0.98
VARS-222ENST00000470953 MPNDQ8N594 471 aa8.92□□□□□ -0.98
VARS-222ENST00000470953 GCC1Q96CN9 775 aa8.92□□□□□ -0.98
VARS-222ENST00000470953 N4BP2Q86UW6 1770 aaPredicted RBP8.91□□□□□ -0.98
VARS-222ENST00000470953 FXR1P51114 621 aaKnown RBP eCLIP8.91□□□□□ -0.98
VARS-222ENST00000470953 TOM1L2Q6ZVM7 507 aa8.91□□□□□ -0.98
VARS-222ENST00000470953 A0A0C4DFX4 3053 aa8.91□□□□□ -0.98
VARS-222ENST00000470953 SLC17A8Q8NDX2 589 aa8.9□□□□□ -0.98
VARS-222ENST00000470953 PRAM1Q96QH2 718 aa8.9□□□□□ -0.98
VARS-222ENST00000470953 RNF181Q9P0P0 153 aa8.9□□□□□ -0.98
VARS-222ENST00000470953 COL18A1P39060 1754 aa8.9□□□□□ -0.98
VARS-222ENST00000470953 SZT2Q5T011 3432 aa8.89□□□□□ -0.99
VARS-222ENST00000470953 EXOC5O00471 708 aa8.89□□□□□ -0.99
VARS-222ENST00000470953 ITGAEP38570 1179 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms