RNA–Protein interactions for RNA: ENST00000470710.1

HDLBP-233, Transcript of high density lipoprotein binding protein, human

TSL 2

Gene HDLBP, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-233	ENST00000470710	ZBED9	Q6R2W3	1325 aa		11.57	□□□□□ -0.56
HDLBP-233	ENST00000470710	CPD	O75976	1380 aa		11.56	□□□□□ -0.56
HDLBP-233	ENST00000470710	U2SURP	O15042	1029 aa	Known RBP	11.56	□□□□□ -0.56
HDLBP-233	ENST00000470710	PHRF1	Q9P1Y6	1649 aa	Known RBP	11.56	□□□□□ -0.56
HDLBP-233	ENST00000470710	FCHSD2	O94868	740 aa		11.55	□□□□□ -0.56
HDLBP-233	ENST00000470710	NGEF	Q8N5V2	710 aa		11.55	□□□□□ -0.56
HDLBP-233	ENST00000470710	RUNDC1	Q96C34	613 aa		11.55	□□□□□ -0.56
HDLBP-233	ENST00000470710	PNN	Q9H307	717 aa	Known RBP	11.55	□□□□□ -0.56
HDLBP-233	ENST00000470710	ABCC6	O95255	1503 aa		11.55	□□□□□ -0.56
HDLBP-233	ENST00000470710	PIP4K2B	P78356	416 aa		11.54	□□□□□ -0.56
HDLBP-233	ENST00000470710	NCBP3	Q53F19	620 aa	Known RBP	11.53	□□□□□ -0.56
HDLBP-233	ENST00000470710	CCDC146	Q8IYE0	955 aa		11.53	□□□□□ -0.56
HDLBP-233	ENST00000470710	CABLES1	Q8TDN4	633 aa		11.53	□□□□□ -0.56
HDLBP-233	ENST00000470710	PLEKHF1	Q96S99	279 aa		11.53	□□□□□ -0.56
HDLBP-233	ENST00000470710	RSPH6A	Q9H0K4	717 aa		11.53	□□□□□ -0.56
HDLBP-233	ENST00000470710	CRYBG1	Q9Y4K1	1723 aa		11.52	□□□□□ -0.56
HDLBP-233	ENST00000470710	ZC3H6	P61129	1189 aa	Known RBP	11.52	□□□□□ -0.57
HDLBP-233	ENST00000470710	IGSF1	Q8N6C5	1336 aa		11.52	□□□□□ -0.57
HDLBP-233	ENST00000470710	KIAA0232	Q92628	1395 aa		11.52	□□□□□ -0.57
HDLBP-233	ENST00000470710	COL16A1	Q07092	1604 aa	Predicted RBP	11.51	□□□□□ -0.57
HDLBP-233	ENST00000470710	APAF1	O14727	1248 aa		11.51	□□□□□ -0.57
HDLBP-233	ENST00000470710	PLEKHG5	O94827	1062 aa		11.51	□□□□□ -0.57
HDLBP-233	ENST00000470710	EYA1	Q99502	592 aa		11.51	□□□□□ -0.57
HDLBP-233	ENST00000470710	KDR	P35968	1356 aa		11.51	□□□□□ -0.57
HDLBP-233	ENST00000470710	ZBTB7C	A1YPR0	619 aa		11.5	□□□□□ -0.57
HDLBP-233	ENST00000470710	PRKAR2B	P31323	418 aa		11.5	□□□□□ -0.57
HDLBP-233	ENST00000470710	TCP11L2	Q8N4U5	519 aa		11.5	□□□□□ -0.57
HDLBP-233	ENST00000470710	AXIN2	Q9Y2T1	843 aa		11.5	□□□□□ -0.57
HDLBP-233	ENST00000470710	MAPK8IP3	Q9UPT6	1336 aa		11.5	□□□□□ -0.57
HDLBP-233	ENST00000470710	COL22A1	Q8NFW1	1626 aa	Predicted RBP	11.49	□□□□□ -0.57
HDLBP-233	ENST00000470710	RGPD1	P0DJD0	1748 aa		11.49	□□□□□ -0.57
HDLBP-233	ENST00000470710	NEFM	P07197	916 aa		11.49	□□□□□ -0.57
HDLBP-233	ENST00000470710	HMOX1	P09601	288 aa		11.49	□□□□□ -0.57
HDLBP-233	ENST00000470710	HAP1	P54257	671 aa	Predicted RBP	11.49	□□□□□ -0.57
HDLBP-233	ENST00000470710	PDE3B	Q13370	1112 aa		11.49	□□□□□ -0.57
HDLBP-233	ENST00000470710	SULT6B1	Q6IMI4	303 aa		11.49	□□□□□ -0.57
HDLBP-233	ENST00000470710	ANKRD24	Q8TF21	1146 aa		11.49	□□□□□ -0.57
HDLBP-233	ENST00000470710	PRDM11	Q9NQV5	511 aa		11.49	□□□□□ -0.57
HDLBP-233	ENST00000470710	ERBB3	P21860	1342 aa		11.49	□□□□□ -0.57
HDLBP-233	ENST00000470710	ZNF521	Q96K83	1311 aa		11.49	□□□□□ -0.57
HDLBP-233	ENST00000470710	NCAPD2	Q15021	1401 aa		11.49	□□□□□ -0.57
HDLBP-233	ENST00000470710	PHLPP1	O60346	1717 aa		11.49	□□□□□ -0.57
HDLBP-233	ENST00000470710	LTN1	O94822	1766 aa		11.49	□□□□□ -0.57
HDLBP-233	ENST00000470710	CCDC27	Q2M243	656 aa		11.48	□□□□□ -0.57
HDLBP-233	ENST00000470710	AEBP1	Q8IUX7	1158 aa		11.48	□□□□□ -0.57
HDLBP-233	ENST00000470710	LTV1	Q96GA3	475 aa	Predicted RBP	11.48	□□□□□ -0.57
HDLBP-233	ENST00000470710	ABCA3	Q99758	1704 aa		11.47	□□□□□ -0.57
HDLBP-233	ENST00000470710	CHRNA2	Q15822	529 aa		11.47	□□□□□ -0.57
HDLBP-233	ENST00000470710	COL18A1	P39060	1754 aa		11.46	□□□□□ -0.57
HDLBP-233	ENST00000470710	JCAD	Q9P266	1359 aa		11.46	□□□□□ -0.57
HDLBP-233	ENST00000470710	TMPO	P42166	694 aa	Known RBP	11.46	□□□□□ -0.57
HDLBP-233	ENST00000470710	NFE2L2	Q16236	605 aa		11.46	□□□□□ -0.57
HDLBP-233	ENST00000470710	NBPF6	Q5VWK0	638 aa		11.46	□□□□□ -0.57
HDLBP-233	ENST00000470710	PHACTR3	Q96KR7	559 aa		11.46	□□□□□ -0.57
HDLBP-233	ENST00000470710	NBPF4	Q96M43	638 aa		11.46	□□□□□ -0.57
HDLBP-233	ENST00000470710	SENP3-EIF4A1	A0A087X0R7	540 aa		11.45	□□□□□ -0.58
HDLBP-233	ENST00000470710	FAM83G	A6ND36	823 aa		11.45	□□□□□ -0.58
HDLBP-233	ENST00000470710	WWC1	Q8IX03	1113 aa		11.45	□□□□□ -0.58
HDLBP-233	ENST00000470710	SALL2	Q9Y467	1007 aa	Predicted RBP	11.45	□□□□□ -0.58
HDLBP-233	ENST00000470710	PLEKHG2	Q9H7P9	1386 aa		11.44	□□□□□ -0.58
HDLBP-233	ENST00000470710	LMO7	Q8WWI1	1683 aa		11.44	□□□□□ -0.58
HDLBP-233	ENST00000470710	WDR63	Q8IWG1	891 aa		11.44	□□□□□ -0.58
HDLBP-233	ENST00000470710	RRP7A	Q9Y3A4	280 aa	Known RBP	11.44	□□□□□ -0.58
HDLBP-233	ENST00000470710	CAMTA1	Q9Y6Y1	1673 aa		11.43	□□□□□ -0.58
HDLBP-233	ENST00000470710	WDR17	Q8IZU2	1322 aa		11.43	□□□□□ -0.58
HDLBP-233	ENST00000470710	RIPK4	P57078	832 aa		11.43	□□□□□ -0.58
HDLBP-233	ENST00000470710	GOLGA2	Q08379	1002 aa		11.43	□□□□□ -0.58
HDLBP-233	ENST00000470710	LMOD3	Q0VAK6	560 aa		11.43	□□□□□ -0.58
HDLBP-233	ENST00000470710	COL5A2	P05997	1499 aa	Predicted RBP	11.43	□□□□□ -0.58
HDLBP-233	ENST00000470710	SPATA31A6	Q5VVP1	1343 aa		11.42	□□□□□ -0.58
HDLBP-233	ENST00000470710	CSB-PGBD3	P0DP91	1061 aa		11.42	□□□□□ -0.58
HDLBP-233	ENST00000470710	NEUROD2	Q15784	382 aa		11.42	□□□□□ -0.58
HDLBP-233	ENST00000470710	USHBP1	Q8N6Y0	703 aa		11.42	□□□□□ -0.58
HDLBP-233	ENST00000470710	GAS2L2	Q8NHY3	880 aa		11.42	□□□□□ -0.58
HDLBP-233	ENST00000470710	NLRP2	Q9NX02	1062 aa		11.42	□□□□□ -0.58
HDLBP-233	ENST00000470710	TRIM35	Q9UPQ4	493 aa		11.42	□□□□□ -0.58
HDLBP-233	ENST00000470710	IL16	Q14005	1332 aa		11.41	□□□□□ -0.58
HDLBP-233	ENST00000470710		E9PSI1	815 aa		11.41	□□□□□ -0.58
HDLBP-233	ENST00000470710	HSPA1L	P34931	641 aa		11.41	□□□□□ -0.58
HDLBP-233	ENST00000470710	FAM208A	Q9UK61	1670 aa	Known RBP	11.4	□□□□□ -0.58
HDLBP-233	ENST00000470710	SLFN5	Q08AF3	891 aa		11.4	□□□□□ -0.58
HDLBP-233	ENST00000470710	MTHFSD	Q2M296	383 aa	Known RBP	11.4	□□□□□ -0.58
HDLBP-233	ENST00000470710	AMOT	Q4VCS5	1084 aa		11.4	□□□□□ -0.58
HDLBP-233	ENST00000470710	TRMT2A	Q8IZ69	625 aa	Known RBP	11.4	□□□□□ -0.58
HDLBP-233	ENST00000470710	CDCA7L	Q96GN5	454 aa		11.4	□□□□□ -0.58
HDLBP-233	ENST00000470710	CARD10	Q9BWT7	1032 aa		11.4	□□□□□ -0.58
HDLBP-233	ENST00000470710	COL14A1	Q05707	1796 aa	Known RBP	11.4	□□□□□ -0.58
HDLBP-233	ENST00000470710	NUTM2B	A6NNL0	878 aa	Predicted RBP	11.39	□□□□□ -0.59
HDLBP-233	ENST00000470710	NUTM2E	B1AL46	878 aa	Predicted RBP	11.39	□□□□□ -0.59
HDLBP-233	ENST00000470710	HTATSF1	O43719	755 aa	Known RBP	11.39	□□□□□ -0.59
HDLBP-233	ENST00000470710	ADAMTS2	O95450	1211 aa		11.39	□□□□□ -0.59
HDLBP-233	ENST00000470710	EVA1C	P58658	441 aa		11.39	□□□□□ -0.59
HDLBP-233	ENST00000470710	CALD1	Q05682	793 aa	Known RBP	11.39	□□□□□ -0.59
HDLBP-233	ENST00000470710	PLEKHO1	Q53GL0	409 aa	Predicted RBP	11.39	□□□□□ -0.59
HDLBP-233	ENST00000470710	NUTM2A	Q8IVF1	878 aa	Predicted RBP	11.39	□□□□□ -0.59
HDLBP-233	ENST00000470710	BTG4	Q9NY30	223 aa		11.39	□□□□□ -0.59
HDLBP-233	ENST00000470710	DUSP27	Q5VZP5	1158 aa		11.38	□□□□□ -0.59
HDLBP-233	ENST00000470710	LARP1	Q6PKG0	1096 aa	Known RBP	11.38	□□□□□ -0.59
HDLBP-233	ENST00000470710	TOM1L2	Q6ZVM7	507 aa		11.38	□□□□□ -0.59
HDLBP-233	ENST00000470710	RAPGEF4	Q8WZA2	1011 aa		11.38	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms