RNA–Protein interactions for RNA: ENST00000470537.1

XRN1-208, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-208ENST00000470537 CIZ1Q9ULV3 898 aaPredicted RBP13.11□□□□□ -0.31
XRN1-208ENST00000470537 NWD2Q9ULI1 1742 aa13.1□□□□□ -0.31
XRN1-208ENST00000470537 FAM83GA6ND36 823 aa13.1□□□□□ -0.31
XRN1-208ENST00000470537 PDAP1Q13442 181 aaKnown RBP13.1□□□□□ -0.31
XRN1-208ENST00000470537 L3MBTL3Q96JM7 780 aaPredicted RBP13.1□□□□□ -0.31
XRN1-208ENST00000470537 POGKQ9P215 609 aa13.1□□□□□ -0.31
XRN1-208ENST00000470537 GPRASP1Q5JY77 1395 aa13.09□□□□□ -0.31
XRN1-208ENST00000470537 PLEKHH1Q9ULM0 1364 aa13.09□□□□□ -0.31
XRN1-208ENST00000470537 PIK3C2GO75747 1445 aa13.09□□□□□ -0.31
XRN1-208ENST00000470537 HRCP23327 699 aa13.09□□□□□ -0.31
XRN1-208ENST00000470537 SPATA31E1Q6ZUB1 1445 aa13.09□□□□□ -0.31
XRN1-208ENST00000470537 MPHOSPH9Q99550 1183 aa13.09□□□□□ -0.31
XRN1-208ENST00000470537 TMEM121BQ9BXQ6 578 aaPredicted RBP13.09□□□□□ -0.31
XRN1-208ENST00000470537 FMN2Q9NZ56 1722 aa13.09□□□□□ -0.31
XRN1-208ENST00000470537 KNDC1Q76NI1 1749 aa13.08□□□□□ -0.32
XRN1-208ENST00000470537 FAM98CQ17RN3 349 aaKnown RBP13.08□□□□□ -0.32
XRN1-208ENST00000470537 BTG4Q9NY30 223 aa13.08□□□□□ -0.32
XRN1-208ENST00000470537 LRP5O75197 1615 aa13.08□□□□□ -0.32
XRN1-208ENST00000470537 BRWD3Q6RI45 1802 aa13.08□□□□□ -0.32
XRN1-208ENST00000470537 EIF3AQ14152 1382 aaKnown RBP13.07□□□□□ -0.32
XRN1-208ENST00000470537 PRAM1Q96QH2 718 aa13.07□□□□□ -0.32
XRN1-208ENST00000470537 NRXN1Q9ULB1 1477 aa13.07□□□□□ -0.32
XRN1-208ENST00000470537 PSDA5PKW4 1024 aaPredicted RBP13.06□□□□□ -0.32
XRN1-208ENST00000470537 ANKARQ7Z5J8 1434 aa13.05□□□□□ -0.32
XRN1-208ENST00000470537 PMFBP1Q8TBY8 1022 aa13.05□□□□□ -0.32
XRN1-208ENST00000470537 EN1Q05925 392 aaPredicted RBP13.04□□□□□ -0.32
XRN1-208ENST00000470537 SAFB2Q14151 953 aaKnown RBP eCLIP13.04□□□□□ -0.32
XRN1-208ENST00000470537 CFAP70Q5T0N1 1121 aa13.04□□□□□ -0.32
XRN1-208ENST00000470537 FAM196AQ6ZSG2 479 aa13.04□□□□□ -0.32
XRN1-208ENST00000470537 PLCH1Q4KWH8 1693 aa13.03□□□□□ -0.32
XRN1-208ENST00000470537 NGDNQ8NEJ9 315 aaKnown RBP13.03□□□□□ -0.32
XRN1-208ENST00000470537 STAC3Q96MF2 364 aa13.03□□□□□ -0.32
XRN1-208ENST00000470537 PRDM11Q9NQV5 511 aa13.03□□□□□ -0.32
XRN1-208ENST00000470537 SPATA31A5Q5VU36 1347 aa13.03□□□□□ -0.32
XRN1-208ENST00000470537 SPATA31A7Q8IWB4 1347 aa13.03□□□□□ -0.32
XRN1-208ENST00000470537 R3HDM1Q15032 1099 aaKnown RBP13.02□□□□□ -0.33
XRN1-208ENST00000470537 PARD3Q8TEW0 1356 aa13.02□□□□□ -0.33
XRN1-208ENST00000470537 IFT172Q9UG01 1749 aa13.02□□□□□ -0.33
XRN1-208ENST00000470537 RGPD8O14715 1765 aaPredicted RBP13.02□□□□□ -0.33
XRN1-208ENST00000470537 MARVELD3Q96A59 401 aa13.01□□□□□ -0.33
XRN1-208ENST00000470537 CABP2Q9NPB3 220 aa13.01□□□□□ -0.33
XRN1-208ENST00000470537 COL14A1Q05707 1796 aaKnown RBP13□□□□□ -0.33
XRN1-208ENST00000470537 DISP2A7MBM2 1401 aa13□□□□□ -0.33
XRN1-208ENST00000470537 C11orf95C9JLR9 678 aaPredicted RBP13□□□□□ -0.33
XRN1-208ENST00000470537 NBPF8Q3BBV2 869 aa13□□□□□ -0.33
XRN1-208ENST00000470537 NBPF14Q5TI25 921 aa13□□□□□ -0.33
XRN1-208ENST00000470537 RGPD1P0DJD0 1748 aa12.99□□□□□ -0.33
XRN1-208ENST00000470537 DLC1Q96QB1 1528 aa12.99□□□□□ -0.33
XRN1-208ENST00000470537 EVA1CP58658 441 aa12.99□□□□□ -0.33
XRN1-208ENST00000470537 PDE3BQ13370 1112 aa12.99□□□□□ -0.33
XRN1-208ENST00000470537 WASLO00401 505 aaPredicted RBP12.98□□□□□ -0.33
XRN1-208ENST00000470537 APBA3O96018 575 aa12.98□□□□□ -0.33
XRN1-208ENST00000470537 TRAK1Q9UPV9 953 aa12.98□□□□□ -0.33
XRN1-208ENST00000470537 TRIM37O94972 964 aa12.97□□□□□ -0.33
XRN1-208ENST00000470537 EZH2Q15910 746 aaKnown RBP12.97□□□□□ -0.33
XRN1-208ENST00000470537 FAM182BQ5T319 152 aa12.97□□□□□ -0.33
XRN1-208ENST00000470537 HIRIP3Q9BW71 556 aaPredicted RBP12.97□□□□□ -0.33
XRN1-208ENST00000470537 SPATA31A1Q5TZJ5 1347 aa12.96□□□□□ -0.33
XRN1-208ENST00000470537 MINK1Q8N4C8 1332 aaPredicted RBP12.96□□□□□ -0.33
XRN1-208ENST00000470537 CAMKK2Q96RR4 588 aa12.96□□□□□ -0.33
XRN1-208ENST00000470537 ABCA3Q99758 1704 aa12.96□□□□□ -0.34
XRN1-208ENST00000470537 ADGRB2O60241 1585 aa12.95□□□□□ -0.34
XRN1-208ENST00000470537 G3V3G9 751 aa12.95□□□□□ -0.34
XRN1-208ENST00000470537 BARGINQ6ZT62 677 aa12.95□□□□□ -0.34
XRN1-208ENST00000470537 STRN4Q9NRL3 753 aa12.95□□□□□ -0.34
XRN1-208ENST00000470537 NRAPQ86VF7 1730 aa12.94□□□□□ -0.34
XRN1-208ENST00000470537 YY1P25490 414 aa12.94□□□□□ -0.34
XRN1-208ENST00000470537 DPY19L2Q6NUT2 758 aa12.94□□□□□ -0.34
XRN1-208ENST00000470537 PPP1R1BQ9UD71 204 aaPredicted RBP12.94□□□□□ -0.34
XRN1-208ENST00000470537 TULP4Q9NRJ4 1543 aa12.93□□□□□ -0.34
XRN1-208ENST00000470537 USP35Q9P2H5 1018 aa12.93□□□□□ -0.34
XRN1-208ENST00000470537 THRAP3Q9Y2W1 955 aaKnown RBP12.93□□□□□ -0.34
XRN1-208ENST00000470537 KIAA0232Q92628 1395 aa12.93□□□□□ -0.34
XRN1-208ENST00000470537 ALS2Q96Q42 1657 aa12.93□□□□□ -0.34
XRN1-208ENST00000470537 EMP3P54852 163 aa12.92□□□□□ -0.34
XRN1-208ENST00000470537 ZC3H6P61129 1189 aaKnown RBP12.92□□□□□ -0.34
XRN1-208ENST00000470537 DCAF11Q8TEB1 546 aa12.92□□□□□ -0.34
XRN1-208ENST00000470537 NUDT16Q96DE0 195 aaKnown RBP12.92□□□□□ -0.34
XRN1-208ENST00000470537 SPON1Q9HCB6 807 aa12.92□□□□□ -0.34
XRN1-208ENST00000470537 TRPM3Q9HCF6 1732 aaPredicted RBP12.92□□□□□ -0.34
XRN1-208ENST00000470537 PRR36Q9H6K5 1346 aa12.91□□□□□ -0.34
XRN1-208ENST00000470537 CHRNA2Q15822 529 aa12.91□□□□□ -0.34
XRN1-208ENST00000470537 TCP11L2Q8N4U5 519 aa12.91□□□□□ -0.34
XRN1-208ENST00000470537 KDM2AQ9Y2K7 1162 aa12.91□□□□□ -0.34
XRN1-208ENST00000470537 THSD7AQ9UPZ6 1657 aa12.9□□□□□ -0.34
XRN1-208ENST00000470537 ABTB2Q8N961 1025 aa12.9□□□□□ -0.34
XRN1-208ENST00000470537 BOLA1Q9Y3E2 137 aa12.9□□□□□ -0.34
XRN1-208ENST00000470537 ATP7BP35670 1465 aa12.9□□□□□ -0.34
XRN1-208ENST00000470537 NLRP13Q86W25 1043 aa12.89□□□□□ -0.35
XRN1-208ENST00000470537 KCNQ2O43526 872 aa12.88□□□□□ -0.35
XRN1-208ENST00000470537 ADGRB1O14514 1584 aa12.88□□□□□ -0.35
XRN1-208ENST00000470537 TNS1Q9HBL0 1735 aaKnown RBP12.88□□□□□ -0.35
XRN1-208ENST00000470537 CDK19Q9BWU1 502 aa12.87□□□□□ -0.35
XRN1-208ENST00000470537 ITSN1Q15811 1721 aa12.87□□□□□ -0.35
XRN1-208ENST00000470537 CPDO75976 1380 aa12.86□□□□□ -0.35
XRN1-208ENST00000470537 NINLQ9Y2I6 1382 aa12.86□□□□□ -0.35
XRN1-208ENST00000470537 PLEKHG3A1L390 1219 aa12.86□□□□□ -0.35
XRN1-208ENST00000470537 PLSCR1O15162 318 aa12.86□□□□□ -0.35
XRN1-208ENST00000470537 NUTM2GQ5VZR2 741 aa12.86□□□□□ -0.35
XRN1-208ENST00000470537 LARP1Q6PKG0 1096 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms