RNA–Protein interactions for RNA: ENST00000470086.5

LSM2-210, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 713 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-210ENST00000470086 OVOS2A0A0G2JMS6 1433 aa12.54□□□□□ -0.4
LSM2-210ENST00000470086 OVOS2A0A0J9YW53 1432 aa12.54□□□□□ -0.4
LSM2-210ENST00000470086 OVOS2Q6IE36 1432 aa12.54□□□□□ -0.4
LSM2-210ENST00000470086 RGL3Q3MIN7 710 aa12.53□□□□□ -0.4
LSM2-210ENST00000470086 LARP1Q6PKG0 1096 aaKnown RBP12.53□□□□□ -0.4
LSM2-210ENST00000470086 PROM2Q8N271 834 aa12.53□□□□□ -0.4
LSM2-210ENST00000470086 NBPF8Q3BBV2 869 aa12.52□□□□□ -0.41
LSM2-210ENST00000470086 NBPF14Q5TI25 921 aa12.52□□□□□ -0.41
LSM2-210ENST00000470086 PPARGC1BQ86YN6 1023 aaKnown RBP12.52□□□□□ -0.41
LSM2-210ENST00000470086 SYT17Q9BSW7 474 aa12.52□□□□□ -0.41
LSM2-210ENST00000470086 ANKRD30BQ9BXX2 1392 aa12.52□□□□□ -0.41
LSM2-210ENST00000470086 ZC3H6P61129 1189 aaKnown RBP12.51□□□□□ -0.41
LSM2-210ENST00000470086 CFAP70Q5T0N1 1121 aa12.51□□□□□ -0.41
LSM2-210ENST00000470086 NUTM2GQ5VZR2 741 aa12.51□□□□□ -0.41
LSM2-210ENST00000470086 BARGINQ6ZT62 677 aa12.5□□□□□ -0.41
LSM2-210ENST00000470086 SLIT3O75094 1523 aa12.48□□□□□ -0.41
LSM2-210ENST00000470086 GPRASP1Q5JY77 1395 aa12.48□□□□□ -0.41
LSM2-210ENST00000470086 DHX57Q6P158 1386 aaKnown RBP12.48□□□□□ -0.41
LSM2-210ENST00000470086 MINK1Q8N4C8 1332 aaPredicted RBP12.48□□□□□ -0.41
LSM2-210ENST00000470086 PDE3BQ13370 1112 aa12.47□□□□□ -0.41
LSM2-210ENST00000470086 SIRT1Q96EB6 747 aa12.47□□□□□ -0.41
LSM2-210ENST00000470086 C14orf93Q9H972 538 aaKnown RBP12.47□□□□□ -0.41
LSM2-210ENST00000470086 PAK3O75914 559 aaPredicted RBP12.46□□□□□ -0.41
LSM2-210ENST00000470086 SSUH2Q9Y2M2 353 aa12.46□□□□□ -0.41
LSM2-210ENST00000470086 TRPM1Q7Z4N2 1603 aa12.46□□□□□ -0.41
LSM2-210ENST00000470086 CRB1P82279 1406 aa12.45□□□□□ -0.42
LSM2-210ENST00000470086 MAP3K5Q99683 1374 aa12.45□□□□□ -0.42
LSM2-210ENST00000470086 QRICH2Q9H0J4 1663 aa12.45□□□□□ -0.42
LSM2-210ENST00000470086 USP19O94966 1318 aa12.45□□□□□ -0.42
LSM2-210ENST00000470086 GIGYF1O75420 1035 aaPredicted RBP12.45□□□□□ -0.42
LSM2-210ENST00000470086 TCP11L2Q8N4U5 519 aa12.45□□□□□ -0.42
LSM2-210ENST00000470086 LY75O60449 1722 aa12.45□□□□□ -0.42
LSM2-210ENST00000470086 CPDO75976 1380 aa12.44□□□□□ -0.42
LSM2-210ENST00000470086 DOT1LQ8TEK3 1739 aa12.44□□□□□ -0.42
LSM2-210ENST00000470086 PLSCR1O15162 318 aa12.43□□□□□ -0.42
LSM2-210ENST00000470086 LTN1O94822 1766 aa12.43□□□□□ -0.42
LSM2-210ENST00000470086 POLR3AO14802 1390 aaPredicted RBP12.43□□□□□ -0.42
LSM2-210ENST00000470086 ZNF827Q17R98 1081 aa12.41□□□□□ -0.42
LSM2-210ENST00000470086 MARCH10Q8NA82 808 aaPredicted RBP12.41□□□□□ -0.42
LSM2-210ENST00000470086 WDR90Q96KV7 1748 aa12.41□□□□□ -0.42
LSM2-210ENST00000470086 ZNF692Q9BU19 519 aaPredicted RBP12.41□□□□□ -0.42
LSM2-210ENST00000470086 BCL11BQ9C0K0 894 aaPredicted RBP12.41□□□□□ -0.42
LSM2-210ENST00000470086 TRAK1Q9UPV9 953 aa12.41□□□□□ -0.42
LSM2-210ENST00000470086 ABCC6O95255 1503 aa12.41□□□□□ -0.42
LSM2-210ENST00000470086 AATKQ6ZMQ8 1374 aa12.41□□□□□ -0.42
LSM2-210ENST00000470086 PCNTO95613 3336 aa12.4□□□□□ -0.42
LSM2-210ENST00000470086 BCL9O00512 1426 aa12.4□□□□□ -0.42
LSM2-210ENST00000470086 ATP10DQ9P241 1426 aa12.4□□□□□ -0.42
LSM2-210ENST00000470086 WASLO00401 505 aaPredicted RBP12.4□□□□□ -0.42
LSM2-210ENST00000470086 SLC15A2Q16348 729 aa12.4□□□□□ -0.42
LSM2-210ENST00000470086 TXNRD1Q16881 649 aa12.4□□□□□ -0.42
LSM2-210ENST00000470086 REM2Q8IYK8 340 aaPredicted RBP12.4□□□□□ -0.42
LSM2-210ENST00000470086 NGDNQ8NEJ9 315 aaKnown RBP12.4□□□□□ -0.42
LSM2-210ENST00000470086 NLGN2Q8NFZ4 835 aa12.4□□□□□ -0.42
LSM2-210ENST00000470086 MTFR1LQ9H019 292 aa12.39□□□□□ -0.43
LSM2-210ENST00000470086 POGKQ9P215 609 aa12.39□□□□□ -0.43
LSM2-210ENST00000470086 EIF3AQ14152 1382 aaKnown RBP12.39□□□□□ -0.43
LSM2-210ENST00000470086 TOGARAM1Q9Y4F4 1720 aa12.39□□□□□ -0.43
LSM2-210ENST00000470086 TNS2Q63HR2 1409 aa12.38□□□□□ -0.43
LSM2-210ENST00000470086 KAT6BQ8WYB5 2073 aa12.38□□□□□ -0.43
LSM2-210ENST00000470086 NFAT5O94916 1531 aa12.37□□□□□ -0.43
LSM2-210ENST00000470086 KIAA1551Q9HCM1 1747 aa12.37□□□□□ -0.43
LSM2-210ENST00000470086 TAF1LQ8IZX4 1826 aa12.37□□□□□ -0.43
LSM2-210ENST00000470086 YBX3P16989 372 aaKnown RBP eCLIP12.37□□□□□ -0.432e-9■■□□□ 14.2
LSM2-210ENST00000470086 ARXQ96QS3 562 aa12.37□□□□□ -0.43
LSM2-210ENST00000470086 ADCY9O60503 1353 aa12.37□□□□□ -0.43
LSM2-210ENST00000470086 USP54Q70EL1 1684 aa12.37□□□□□ -0.43
LSM2-210ENST00000470086 RGPD2P0DJD1 1756 aa12.37□□□□□ -0.43
LSM2-210ENST00000470086 ACEP12821 1306 aa12.37□□□□□ -0.43
LSM2-210ENST00000470086 EVA1CP58658 441 aa12.36□□□□□ -0.43
LSM2-210ENST00000470086 THRAP3Q9Y2W1 955 aaKnown RBP12.36□□□□□ -0.43
LSM2-210ENST00000470086 C5P01031 1676 aa12.35□□□□□ -0.43
LSM2-210ENST00000470086 NUDT16Q96DE0 195 aaKnown RBP12.35□□□□□ -0.43
LSM2-210ENST00000470086 STK32BQ9NY57 414 aa12.35□□□□□ -0.43
LSM2-210ENST00000470086 CPSF1Q10570 1443 aaKnown RBP12.35□□□□□ -0.43
LSM2-210ENST00000470086 KIAA1210Q9ULL0 1709 aa12.34□□□□□ -0.43
LSM2-210ENST00000470086 DDB1Q16531 1140 aa12.34□□□□□ -0.43
LSM2-210ENST00000470086 MON2Q7Z3U7 1717 aa12.34□□□□□ -0.43
LSM2-210ENST00000470086 ZBTB7CA1YPR0 619 aa12.33□□□□□ -0.44
LSM2-210ENST00000470086 GPR162Q16538 588 aa12.33□□□□□ -0.44
LSM2-210ENST00000470086 PELP1Q8IZL8 1130 aaKnown RBP12.33□□□□□ -0.44
LSM2-210ENST00000470086 KLHL34Q8N239 644 aa12.33□□□□□ -0.44
LSM2-210ENST00000470086 LRRC4BQ9NT99 713 aa12.33□□□□□ -0.44
LSM2-210ENST00000470086 AXIN2Q9Y2T1 843 aa12.33□□□□□ -0.44
LSM2-210ENST00000470086 CICQ96RK0 1608 aaPredicted RBP12.31□□□□□ -0.44
LSM2-210ENST00000470086 GCP02774 474 aa12.31□□□□□ -0.44
LSM2-210ENST00000470086 MPHOSPH9Q99550 1183 aa12.31□□□□□ -0.44
LSM2-210ENST00000470086 FAM208AQ9UK61 1670 aaKnown RBP12.31□□□□□ -0.44
LSM2-210ENST00000470086 PPIP5K1Q6PFW1 1433 aa12.3□□□□□ -0.44
LSM2-210ENST00000470086 HSPA6P17066 643 aa12.3□□□□□ -0.44
LSM2-210ENST00000470086 CHRDL2Q6WN34 429 aa12.3□□□□□ -0.44
LSM2-210ENST00000470086 ABTB2Q8N961 1025 aa12.3□□□□□ -0.44
LSM2-210ENST00000470086 ACSBG1Q96GR2 724 aa12.3□□□□□ -0.44
LSM2-210ENST00000470086 PNPLA7Q6ZV29 1317 aa12.3□□□□□ -0.44
LSM2-210ENST00000470086 WDR17Q8IZU2 1322 aa12.3□□□□□ -0.44
LSM2-210ENST00000470086 USP6P35125 1406 aa12.29□□□□□ -0.44
LSM2-210ENST00000470086 SPDYE4A6NLX3 237 aa12.29□□□□□ -0.44
LSM2-210ENST00000470086 PKD1L3Q7Z443 1732 aa12.28□□□□□ -0.44
LSM2-210ENST00000470086 N4BP2Q86UW6 1770 aaPredicted RBP12.28□□□□□ -0.44
LSM2-210ENST00000470086 BRCA1P38398 1863 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms