RNA–Protein interactions for RNA: ENST00000469975.5

C4A-250, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 1 (best)

Gene C4A, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-250ENST00000469975 ARHGEF25Q86VW2 580 aa23.9■■□□□ 1.42
C4A-250ENST00000469975 TMC1Q8TDI8 760 aa23.9■■□□□ 1.42
C4A-250ENST00000469975 CAMKK2Q96RR4 588 aa23.89■■□□□ 1.41
C4A-250ENST00000469975 PEAK1Q9H792 1746 aa23.89■■□□□ 1.41
C4A-250ENST00000469975 LRP5O75197 1615 aa23.88■■□□□ 1.41
C4A-250ENST00000469975 TRIM26Q12899 539 aaPredicted RBP23.88■■□□□ 1.41
C4A-250ENST00000469975 NME9Q86XW9 330 aa23.88■■□□□ 1.41
C4A-250ENST00000469975 SLC12A5Q9H2X9 1139 aa23.88■■□□□ 1.41
C4A-250ENST00000469975 SBF2Q86WG5 1849 aa23.88■■□□□ 1.41
C4A-250ENST00000469975 RREB1Q92766 1687 aa23.88■■□□□ 1.41
C4A-250ENST00000469975 USP54Q70EL1 1684 aa23.87■■□□□ 1.41
C4A-250ENST00000469975 R3HDM1Q15032 1099 aaKnown RBP23.87■■□□□ 1.41
C4A-250ENST00000469975 KCNH5Q8NCM2 988 aa23.87■■□□□ 1.41
C4A-250ENST00000469975 LTN1O94822 1766 aa23.87■■□□□ 1.41
C4A-250ENST00000469975 NUP188Q5SRE5 1749 aa23.87■■□□□ 1.41
C4A-250ENST00000469975 WDR17Q8IZU2 1322 aa23.86■■□□□ 1.41
C4A-250ENST00000469975 CSB-PGBD3P0DP91 1061 aa23.83■■□□□ 1.41
C4A-250ENST00000469975 USP31Q70CQ4 1352 aa23.82■■□□□ 1.4
C4A-250ENST00000469975 DDB1Q16531 1140 aa23.82■■□□□ 1.4
C4A-250ENST00000469975 A0A1W2PP64 1363 aa23.81■■□□□ 1.4
C4A-250ENST00000469975 ST20-MTHFSA0A0A6YYL1 179 aa23.81■■□□□ 1.4
C4A-250ENST00000469975 HDGFL2Q7Z4V5 671 aaPredicted RBP23.81■■□□□ 1.4
C4A-250ENST00000469975 OVOS2A0A0G2JMS6 1433 aa23.81■■□□□ 1.4
C4A-250ENST00000469975 OVOS2A0A0J9YW53 1432 aa23.81■■□□□ 1.4
C4A-250ENST00000469975 OVOS2Q6IE36 1432 aa23.81■■□□□ 1.4
C4A-250ENST00000469975 TESK2Q96S53 571 aa23.8■■□□□ 1.4
C4A-250ENST00000469975 PTF1AQ7RTS3 328 aa23.79■■□□□ 1.4
C4A-250ENST00000469975 EDC4Q6P2E9 1401 aaKnown RBP23.78■■□□□ 1.4
C4A-250ENST00000469975 MARCH10Q8NA82 808 aaPredicted RBP23.78■■□□□ 1.4
C4A-250ENST00000469975 CARD10Q9BWT7 1032 aa23.78■■□□□ 1.4
C4A-250ENST00000469975 ABCC6O95255 1503 aa23.78■■□□□ 1.4
C4A-250ENST00000469975 PARD3Q8TEW0 1356 aa23.78■■□□□ 1.4
C4A-250ENST00000469975 TERF2IPQ9NYB0 399 aa23.75■■□□□ 1.39
C4A-250ENST00000469975 PUS7Q96PZ0 661 aaKnown RBP23.72■■□□□ 1.39
C4A-250ENST00000469975 CDCA7Q9BWT1 371 aaPredicted RBP23.72■■□□□ 1.39
C4A-250ENST00000469975 RGPD3A6NKT7 1758 aaPredicted RBP23.72■■□□□ 1.39
C4A-250ENST00000469975 RGPD4Q7Z3J3 1758 aa23.72■■□□□ 1.39
C4A-250ENST00000469975 CCDC7Q96M83 1385 aa23.71■■□□□ 1.39
C4A-250ENST00000469975 ERBB3P21860 1342 aa23.71■■□□□ 1.39
C4A-250ENST00000469975 NLRP2Q9NX02 1062 aa23.71■■□□□ 1.39
C4A-250ENST00000469975 USP47Q96K76 1375 aa23.69■■□□□ 1.38
C4A-250ENST00000469975 ANKRD24Q8TF21 1146 aa23.69■■□□□ 1.38
C4A-250ENST00000469975 C11orf95C9JLR9 678 aaPredicted RBP23.68■■□□□ 1.38
C4A-250ENST00000469975 EXOC5O00471 708 aa23.68■■□□□ 1.38
C4A-250ENST00000469975 FBLN1P23142 703 aa23.68■■□□□ 1.38
C4A-250ENST00000469975 BCL11BQ9C0K0 894 aaPredicted RBP23.68■■□□□ 1.38
C4A-250ENST00000469975 TNS2Q63HR2 1409 aa23.67■■□□□ 1.38
C4A-250ENST00000469975 NBPF14Q5TI25 921 aa23.67■■□□□ 1.38
C4A-250ENST00000469975 NINLQ9Y2I6 1382 aa23.66■■□□□ 1.38
C4A-250ENST00000469975 RGPD2P0DJD1 1756 aa23.66■■□□□ 1.38
C4A-250ENST00000469975 LTV1Q96GA3 475 aaPredicted RBP23.65■■□□□ 1.38
C4A-250ENST00000469975 BCL9O00512 1426 aa23.65■■□□□ 1.38
C4A-250ENST00000469975 PLSCR1O15162 318 aa23.64■■□□□ 1.37
C4A-250ENST00000469975 NHSQ6T4R5 1651 aa23.64■■□□□ 1.37
C4A-250ENST00000469975 KCNQ2O43526 872 aa23.63■■□□□ 1.37
C4A-250ENST00000469975 PROM2Q8N271 834 aa23.63■■□□□ 1.37
C4A-250ENST00000469975 ANO8Q9HCE9 1232 aaPredicted RBP23.63■■□□□ 1.37
C4A-250ENST00000469975 ANKRD36BQ8N2N9 1353 aa23.63■■□□□ 1.37
C4A-250ENST00000469975 KAT6BQ8WYB5 2073 aa23.63■■□□□ 1.37
C4A-250ENST00000469975 ACSBG1Q96GR2 724 aa23.62■■□□□ 1.37
C4A-250ENST00000469975 COG3Q96JB2 828 aa23.62■■□□□ 1.37
C4A-250ENST00000469975 FAM208AQ9UK61 1670 aaKnown RBP23.61■■□□□ 1.37
C4A-250ENST00000469975 IL2RBP14784 551 aa23.61■■□□□ 1.37
C4A-250ENST00000469975 TMF1P82094 1093 aa23.61■■□□□ 1.37
C4A-250ENST00000469975 IP6K1Q92551 441 aa23.61■■□□□ 1.37
C4A-250ENST00000469975 PCGF6Q9BYE7 350 aa23.61■■□□□ 1.37
C4A-250ENST00000469975 MAP3K19Q56UN5 1328 aa23.6■■□□□ 1.37
C4A-250ENST00000469975 KIF20BQ96Q89 1820 aa23.6■■□□□ 1.37
C4A-250ENST00000469975 MYOM1P52179 1685 aa23.59■■□□□ 1.37
C4A-250ENST00000469975 BTAF1O14981 1849 aa23.59■■□□□ 1.37
C4A-250ENST00000469975 CASZ1Q86V15 1759 aa23.58■■□□□ 1.37
C4A-250ENST00000469975 GGNBP2Q9H3C7 697 aa23.58■■□□□ 1.37
C4A-250ENST00000469975 SLC24A1O60721 1099 aa23.57■■□□□ 1.36
C4A-250ENST00000469975 HOXC9P31274 260 aa23.57■■□□□ 1.36
C4A-250ENST00000469975 PDGFDQ9GZP0 370 aaPredicted RBP23.57■■□□□ 1.36
C4A-250ENST00000469975 FYB1O15117 783 aa23.55■■□□□ 1.36
C4A-250ENST00000469975 AMPHP49418 695 aa23.55■■□□□ 1.36
C4A-250ENST00000469975 RRS1Q15050 365 aaKnown RBP23.55■■□□□ 1.36
C4A-250ENST00000469975 TXNRD1Q16881 649 aa23.55■■□□□ 1.36
C4A-250ENST00000469975 SHANK3Q9BYB0 1731 aa23.54■■□□□ 1.36
C4A-250ENST00000469975 DDX54Q8TDD1 881 aaKnown RBP23.52■■□□□ 1.36
C4A-250ENST00000469975 SPON1Q9HCB6 807 aa23.51■■□□□ 1.35
C4A-250ENST00000469975 CARD14Q9BXL6 1004 aa23.5■■□□□ 1.35
C4A-250ENST00000469975 DOT1LQ8TEK3 1739 aa23.5■■□□□ 1.35
C4A-250ENST00000469975 MEGF6O75095 1541 aa23.49■■□□□ 1.35
C4A-250ENST00000469975 USHBP1Q8N6Y0 703 aa23.48■■□□□ 1.35
C4A-250ENST00000469975 PAPPAQ13219 1627 aa23.48■■□□□ 1.35
C4A-250ENST00000469975 ZBTB7AO95365 584 aa23.47■■□□□ 1.35
C4A-250ENST00000469975 CDCA8Q53HL2 280 aa23.47■■□□□ 1.35
C4A-250ENST00000469975 STK32BQ9NY57 414 aa23.47■■□□□ 1.35
C4A-250ENST00000469975 PPP1R1BQ9UD71 204 aaPredicted RBP23.47■■□□□ 1.35
C4A-250ENST00000469975 RTL1A6NKG5 1358 aa23.47■■□□□ 1.35
C4A-250ENST00000469975 NSD3Q9BZ95 1437 aa23.47■■□□□ 1.35
C4A-250ENST00000469975 NBPF6Q5VWK0 638 aa23.46■■□□□ 1.35
C4A-250ENST00000469975 NBPF4Q96M43 638 aa23.46■■□□□ 1.35
C4A-250ENST00000469975 SLC15A2Q16348 729 aa23.45■■□□□ 1.34
C4A-250ENST00000469975 TIMELESSQ9UNS1 1208 aa23.45■■□□□ 1.34
C4A-250ENST00000469975 HSP90AB2PQ58FF8 381 aa23.43■■□□□ 1.34
C4A-250ENST00000469975 ATF5Q9Y2D1 282 aaPredicted RBP23.43■■□□□ 1.34
C4A-250ENST00000469975 CLSPNQ9HAW4 1339 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms