RNA–Protein interactions for RNA: ENST00000469804.1

KPNA4-202, Transcript of karyopherin subunit alpha 4, humanhuman

TSL 2

Gene KPNA4, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA4-202ENST00000469804 GJD4Q96KN9 370 aaPredicted RBP34.97■■■■□ 3.19
KPNA4-202ENST00000469804 CCDC9Q9Y3X0 531 aaKnown RBP34.97■■■■□ 3.19
KPNA4-202ENST00000469804 AXIN2Q9Y2T1 843 aa34.95■■■■□ 3.19
KPNA4-202ENST00000469804 RGS12O14924 1447 aa34.95■■■■□ 3.19
KPNA4-202ENST00000469804 ABCC6O95255 1503 aa34.94■■■■□ 3.18
KPNA4-202ENST00000469804 CDK12Q9NYV4 1490 aaPredicted RBP34.92■■■■□ 3.18
KPNA4-202ENST00000469804 EVA1CP58658 441 aa34.9■■■■□ 3.18
KPNA4-202ENST00000469804 MAP2P11137 1827 aaKnown RBP34.9■■■■□ 3.18
KPNA4-202ENST00000469804 PEAK1Q9H792 1746 aa34.89■■■■□ 3.18
KPNA4-202ENST00000469804 MAP3K19Q56UN5 1328 aa34.89■■■■□ 3.18
KPNA4-202ENST00000469804 LARP1Q6PKG0 1096 aaKnown RBP34.89■■■■□ 3.18
KPNA4-202ENST00000469804 KNSTRNQ9Y448 316 aa34.89■■■■□ 3.18
KPNA4-202ENST00000469804 RRS1Q15050 365 aaKnown RBP34.88■■■■□ 3.17
KPNA4-202ENST00000469804 SPATA31A5Q5VU36 1347 aa34.87■■■■□ 3.17
KPNA4-202ENST00000469804 SPATA31A7Q8IWB4 1347 aa34.87■■■■□ 3.17
KPNA4-202ENST00000469804 BRWD3Q6RI45 1802 aa34.86■■■■□ 3.17
KPNA4-202ENST00000469804 NSD2O96028 1365 aa34.85■■■■□ 3.17
KPNA4-202ENST00000469804 PER1O15534 1290 aaPredicted RBP34.84■■■■□ 3.17
KPNA4-202ENST00000469804 SPATA31A1Q5TZJ5 1347 aa34.83■■■■□ 3.17
KPNA4-202ENST00000469804 AMER1Q5JTC6 1135 aaPredicted RBP34.82■■■■□ 3.16
KPNA4-202ENST00000469804 USP35Q9P2H5 1018 aa34.82■■■■□ 3.16
KPNA4-202ENST00000469804 CRB1P82279 1406 aa34.81■■■■□ 3.16
KPNA4-202ENST00000469804 WNK3Q9BYP7 1800 aa34.81■■■■□ 3.16
KPNA4-202ENST00000469804 RGPD2P0DJD1 1756 aa34.8■■■■□ 3.16
KPNA4-202ENST00000469804 THSD7AQ9UPZ6 1657 aa34.8■■■■□ 3.16
KPNA4-202ENST00000469804 TNNT2P45379 298 aaPredicted RBP34.8■■■■□ 3.16
KPNA4-202ENST00000469804 WDR17Q8IZU2 1322 aa34.8■■■■□ 3.16
KPNA4-202ENST00000469804 HOXC9P31274 260 aa34.79■■■■□ 3.16
KPNA4-202ENST00000469804 AMPHP49418 695 aa34.79■■■■□ 3.16
KPNA4-202ENST00000469804 FAM98CQ17RN3 349 aaKnown RBP34.79■■■■□ 3.16
KPNA4-202ENST00000469804 IP6K1Q92551 441 aa34.79■■■■□ 3.16
KPNA4-202ENST00000469804 BLMP54132 1417 aaPredicted RBP34.79■■■■□ 3.16
KPNA4-202ENST00000469804 RTL1A6NKG5 1358 aa34.77■■■■□ 3.16
KPNA4-202ENST00000469804 CSB-PGBD3P0DP91 1061 aa34.77■■■■□ 3.16
KPNA4-202ENST00000469804 TOM1L2Q6ZVM7 507 aa34.77■■■■□ 3.16
KPNA4-202ENST00000469804 EMILIN1Q9Y6C2 1016 aa34.77■■■■□ 3.16
KPNA4-202ENST00000469804 ERBB3P21860 1342 aa34.76■■■■□ 3.15
KPNA4-202ENST00000469804 FAM208AQ9UK61 1670 aaKnown RBP34.76■■■■□ 3.15
KPNA4-202ENST00000469804 ANKRD24Q8TF21 1146 aa34.75■■■■□ 3.15
KPNA4-202ENST00000469804 CNGB1Q14028 1251 aaPredicted RBP34.74■■■■□ 3.15
KPNA4-202ENST00000469804 CC2D1BQ5T0F9 858 aaKnown RBP34.74■■■■□ 3.15
KPNA4-202ENST00000469804 MORC1Q86VD1 984 aa34.74■■■■□ 3.15
KPNA4-202ENST00000469804 SEPT12Q8IYM1 358 aa34.74■■■■□ 3.15
KPNA4-202ENST00000469804 A0A0G2JS52 829 aa34.73■■■■□ 3.15
KPNA4-202ENST00000469804 MYT1Q01538 1121 aa34.73■■■■□ 3.15
KPNA4-202ENST00000469804 LTV1Q96GA3 475 aaPredicted RBP34.73■■■■□ 3.15
KPNA4-202ENST00000469804 ONECUT3O60422 494 aaPredicted RBP34.71■■■■□ 3.15
KPNA4-202ENST00000469804 FLT4P35916 1363 aa34.71■■■■□ 3.15
KPNA4-202ENST00000469804 TCP11L2Q8N4U5 519 aa34.7■■■■□ 3.15
KPNA4-202ENST00000469804 PPM1GO15355 546 aaPredicted RBP34.69■■■■□ 3.14
KPNA4-202ENST00000469804 POLKQ9UBT6 870 aa34.69■■■■□ 3.14
KPNA4-202ENST00000469804 HSP90AB2PQ58FF8 381 aa34.68■■■■□ 3.14
KPNA4-202ENST00000469804 PARP4Q9UKK3 1724 aaKnown RBP34.68■■■■□ 3.14
KPNA4-202ENST00000469804 KIF24Q5T7B8 1368 aa34.67■■■■□ 3.14
KPNA4-202ENST00000469804 NPC1L1Q9UHC9 1359 aa34.66■■■■□ 3.14
KPNA4-202ENST00000469804 BARGINQ6ZT62 677 aa34.66■■■■□ 3.14
KPNA4-202ENST00000469804 CARD10Q9BWT7 1032 aa34.66■■■■□ 3.14
KPNA4-202ENST00000469804 NLRP2Q9NX02 1062 aa34.66■■■■□ 3.14
KPNA4-202ENST00000469804 INSRP06213 1382 aa34.65■■■■□ 3.14
KPNA4-202ENST00000469804 LRRC37A3O60309 1634 aa34.65■■■■□ 3.14
KPNA4-202ENST00000469804 THRAP3Q9Y2W1 955 aaKnown RBP34.64■■■■□ 3.14
KPNA4-202ENST00000469804 SMG6Q86US8 1419 aaKnown RBP34.64■■■■□ 3.14
KPNA4-202ENST00000469804 SOCS7O14512 581 aa34.63■■■■□ 3.13
KPNA4-202ENST00000469804 DDX10Q13206 875 aaKnown RBP34.61■■■■□ 3.13
KPNA4-202ENST00000469804 DISP2A7MBM2 1401 aa34.59■■■■□ 3.13
KPNA4-202ENST00000469804 KRT27Q7Z3Y8 459 aa34.56■■■■□ 3.12
KPNA4-202ENST00000469804 USHBP1Q8N6Y0 703 aa34.54■■■■□ 3.12
KPNA4-202ENST00000469804 NBPF6Q5VWK0 638 aa34.53■■■■□ 3.12
KPNA4-202ENST00000469804 NBPF4Q96M43 638 aa34.53■■■■□ 3.12
KPNA4-202ENST00000469804 FAM182BQ5T319 152 aa34.52■■■■□ 3.12
KPNA4-202ENST00000469804 ZNF316A6NFI3 1004 aaPredicted RBP34.5■■■■□ 3.11
KPNA4-202ENST00000469804 EIF4A2Q14240 407 aaKnown RBP34.48■■■■□ 3.11
KPNA4-202ENST00000469804 IL2RBP14784 551 aa34.47■■■■□ 3.11
KPNA4-202ENST00000469804 MTHFSP49914 203 aa34.47■■■■□ 3.11
KPNA4-202ENST00000469804 CDCA7Q9BWT1 371 aaPredicted RBP34.47■■■■□ 3.11
KPNA4-202ENST00000469804 MEGF6O75095 1541 aa34.46■■■■□ 3.11
KPNA4-202ENST00000469804 DDB1Q16531 1140 aa34.46■■■■□ 3.11
KPNA4-202ENST00000469804 SHANK3Q9BYB0 1731 aa34.45■■■■□ 3.11
KPNA4-202ENST00000469804 PDE3BQ13370 1112 aa34.45■■■■□ 3.11
KPNA4-202ENST00000469804 TNS2Q63HR2 1409 aa34.45■■■■□ 3.11
KPNA4-202ENST00000469804 EP400Q96L91 3159 aa34.44■■■■□ 3.1
KPNA4-202ENST00000469804 UPF1Q92900 1129 aaKnown RBP eCLIP34.44■■■■□ 3.1
KPNA4-202ENST00000469804 RGPD1P0DJD0 1748 aa34.43■■■■□ 3.1
KPNA4-202ENST00000469804 NCAPD2Q15021 1401 aa34.42■■■■□ 3.1
KPNA4-202ENST00000469804 EYA1Q99502 592 aa34.42■■■■□ 3.1
KPNA4-202ENST00000469804 PARD3Q8TEW0 1356 aa34.39■■■■□ 3.1
KPNA4-202ENST00000469804 COL3A1P02461 1466 aaPredicted RBP34.39■■■■□ 3.1
KPNA4-202ENST00000469804 SBF2Q86WG5 1849 aa34.38■■■■□ 3.09
KPNA4-202ENST00000469804 EXOC5O00471 708 aa34.37■■■■□ 3.09
KPNA4-202ENST00000469804 PPP2R1AP30153 589 aa34.37■■■■□ 3.09
KPNA4-202ENST00000469804 OVOS2A0A0G2JMS6 1433 aa34.37■■■■□ 3.09
KPNA4-202ENST00000469804 MARCH10Q8NA82 808 aaPredicted RBP34.35■■■■□ 3.09
KPNA4-202ENST00000469804 PKD1L3Q7Z443 1732 aa34.35■■■■□ 3.09
KPNA4-202ENST00000469804 TNS1Q9HBL0 1735 aaKnown RBP34.35■■■■□ 3.09
KPNA4-202ENST00000469804 IGSF1Q8N6C5 1336 aa34.34■■■■□ 3.09
KPNA4-202ENST00000469804 IL13P35225 146 aa34.33■■■■□ 3.09
KPNA4-202ENST00000469804 RAPGEF4Q8WZA2 1011 aa34.33■■■■□ 3.09
KPNA4-202ENST00000469804 TATP17735 454 aaPredicted RBP34.3■■■■□ 3.08
KPNA4-202ENST00000469804 FAM196AQ6ZSG2 479 aa34.3■■■■□ 3.08
KPNA4-202ENST00000469804 AEBP1Q8IUX7 1158 aa34.28■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms