RNA–Protein interactions for RNA: ENST00000469560.1

PMPCB-207, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 2

Gene PMPCB, Length 1,615 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-207ENST00000469560 OVOS2Q6IE36 1432 aa9.61□□□□□ -0.87
PMPCB-207ENST00000469560 CCER2I3L3R5 266 aa9.6□□□□□ -0.87
PMPCB-207ENST00000469560 RALBP1Q15311 655 aa9.6□□□□□ -0.87
PMPCB-207ENST00000469560 PXDNQ92626 1479 aa9.6□□□□□ -0.87
PMPCB-207ENST00000469560 SLAIN2Q9P270 581 aa9.6□□□□□ -0.87
PMPCB-207ENST00000469560 CGNL1Q0VF96 1302 aa9.6□□□□□ -0.87
PMPCB-207ENST00000469560 MYBBP1AQ9BQG0 1328 aaKnown RBP9.6□□□□□ -0.87
PMPCB-207ENST00000469560 ATF3P18847 181 aa9.6□□□□□ -0.87
PMPCB-207ENST00000469560 TNNT2P45379 298 aaPredicted RBP9.6□□□□□ -0.87
PMPCB-207ENST00000469560 CADPS2Q86UW7 1296 aa9.6□□□□□ -0.87
PMPCB-207ENST00000469560 NGDNQ8NEJ9 315 aaKnown RBP9.6□□□□□ -0.87
PMPCB-207ENST00000469560 USP54Q70EL1 1684 aa9.59□□□□□ -0.87
PMPCB-207ENST00000469560 ALS2Q96Q42 1657 aa9.59□□□□□ -0.87
PMPCB-207ENST00000469560 USP31Q70CQ4 1352 aa9.58□□□□□ -0.88
PMPCB-207ENST00000469560 PEAK1Q9H792 1746 aa9.58□□□□□ -0.88
PMPCB-207ENST00000469560 NUTM2GQ5VZR2 741 aa9.58□□□□□ -0.88
PMPCB-207ENST00000469560 PNISRQ8TF01 805 aaKnown RBP9.58□□□□□ -0.88
PMPCB-207ENST00000469560 KIF1AQ12756 1690 aa9.58□□□□□ -0.88
PMPCB-207ENST00000469560 COL3A1P02461 1466 aaPredicted RBP9.58□□□□□ -0.88
PMPCB-207ENST00000469560 KRT28Q7Z3Y7 464 aa9.57□□□□□ -0.88
PMPCB-207ENST00000469560 MORC1Q86VD1 984 aa9.57□□□□□ -0.88
PMPCB-207ENST00000469560 MED1Q15648 1581 aaPredicted RBP9.57□□□□□ -0.88
PMPCB-207ENST00000469560 SHPRHQ149N8 1683 aa9.57□□□□□ -0.88
PMPCB-207ENST00000469560 NSD2O96028 1365 aa9.57□□□□□ -0.88
PMPCB-207ENST00000469560 PLCD3Q8N3E9 789 aa9.56□□□□□ -0.88
PMPCB-207ENST00000469560 DCBLD2Q96PD2 775 aa9.56□□□□□ -0.88
PMPCB-207ENST00000469560 POLKQ9UBT6 870 aa9.56□□□□□ -0.88
PMPCB-207ENST00000469560 NHSL1Q5SYE7 1610 aa9.56□□□□□ -0.88
PMPCB-207ENST00000469560 BRD4O60885 1362 aaPredicted RBP9.56□□□□□ -0.88
PMPCB-207ENST00000469560 CRYBG1Q9Y4K1 1723 aa9.56□□□□□ -0.88
PMPCB-207ENST00000469560 NLRP13Q86W25 1043 aa9.56□□□□□ -0.88
PMPCB-207ENST00000469560 EMILIN1Q9Y6C2 1016 aa9.56□□□□□ -0.88
PMPCB-207ENST00000469560 SOS2Q07890 1332 aaPredicted RBP9.55□□□□□ -0.88
PMPCB-207ENST00000469560 TTC21AQ8NDW8 1320 aa9.55□□□□□ -0.88
PMPCB-207ENST00000469560 ROBO1Q9Y6N7 1651 aa9.55□□□□□ -0.88
PMPCB-207ENST00000469560 MTHFSP49914 203 aa9.55□□□□□ -0.88
PMPCB-207ENST00000469560 PSME1Q06323 249 aa9.55□□□□□ -0.88
PMPCB-207ENST00000469560 MRS2Q9HD23 443 aa9.55□□□□□ -0.88
PMPCB-207ENST00000469560 PNPLA6Q8IY17 1366 aa9.55□□□□□ -0.88
PMPCB-207ENST00000469560 NFAT5O94916 1531 aa9.54□□□□□ -0.88
PMPCB-207ENST00000469560 MAP2P11137 1827 aaKnown RBP9.54□□□□□ -0.88
PMPCB-207ENST00000469560 SENP3-EIF4A1A0A087X0R7 540 aa9.54□□□□□ -0.88
PMPCB-207ENST00000469560 RRS1Q15050 365 aaKnown RBP9.54□□□□□ -0.88
PMPCB-207ENST00000469560 PHF12Q96QT6 1004 aa9.54□□□□□ -0.88
PMPCB-207ENST00000469560 SMG6Q86US8 1419 aaKnown RBP9.54□□□□□ -0.88
PMPCB-207ENST00000469560 SLIT3O75094 1523 aa9.53□□□□□ -0.88
PMPCB-207ENST00000469560 AATKQ6ZMQ8 1374 aa9.53□□□□□ -0.88
PMPCB-207ENST00000469560 USP19O94966 1318 aa9.53□□□□□ -0.88
PMPCB-207ENST00000469560 SPATA31A3Q5VYP0 1347 aa9.53□□□□□ -0.88
PMPCB-207ENST00000469560 PAK3O75914 559 aaPredicted RBP9.53□□□□□ -0.88
PMPCB-207ENST00000469560 NLRP6P59044 892 aa9.53□□□□□ -0.88
PMPCB-207ENST00000469560 ABTB2Q8N961 1025 aa9.53□□□□□ -0.88
PMPCB-207ENST00000469560 ZNF579Q8NAF0 562 aaKnown RBP9.52□□□□□ -0.89
PMPCB-207ENST00000469560 CERKQ8TCT0 537 aa9.52□□□□□ -0.89
PMPCB-207ENST00000469560 CABLES1Q8TDN4 633 aa9.52□□□□□ -0.89
PMPCB-207ENST00000469560 COG3Q96JB2 828 aa9.52□□□□□ -0.89
PMPCB-207ENST00000469560 CIZ1Q9ULV3 898 aaPredicted RBP9.52□□□□□ -0.89
PMPCB-207ENST00000469560 SBNO1A3KN83 1393 aa9.52□□□□□ -0.89
PMPCB-207ENST00000469560 INSRP06213 1382 aa9.52□□□□□ -0.89
PMPCB-207ENST00000469560 MAP3K19Q56UN5 1328 aa9.51□□□□□ -0.89
PMPCB-207ENST00000469560 AHDC1Q5TGY3 1603 aaPredicted RBP9.51□□□□□ -0.89
PMPCB-207ENST00000469560 SOX12O15370 315 aa9.51□□□□□ -0.89
PMPCB-207ENST00000469560 LCE2DQ5TA82 110 aaPredicted RBP9.51□□□□□ -0.89
PMPCB-207ENST00000469560 FAM9BQ8IZU0 186 aa9.51□□□□□ -0.89
PMPCB-207ENST00000469560 ARXQ96QS3 562 aa9.51□□□□□ -0.89
PMPCB-207ENST00000469560 TSPYL2Q9H2G4 693 aaPredicted RBP9.51□□□□□ -0.89
PMPCB-207ENST00000469560 NPHP3Q7Z494 1330 aa9.51□□□□□ -0.89
PMPCB-207ENST00000469560 TNS3Q68CZ2 1445 aa9.51□□□□□ -0.89
PMPCB-207ENST00000469560 PHRF1Q9P1Y6 1649 aaKnown RBP9.51□□□□□ -0.89
PMPCB-207ENST00000469560 PLEKHG5O94827 1062 aa9.5□□□□□ -0.89
PMPCB-207ENST00000469560 YTHDC1Q96MU7 727 aaKnown RBP9.5□□□□□ -0.89
PMPCB-207ENST00000469560 DAXXQ9UER7 740 aaPredicted RBP9.5□□□□□ -0.89
PMPCB-207ENST00000469560 ADAMTS8Q9UP79 889 aa9.5□□□□□ -0.89
PMPCB-207ENST00000469560 COL16A1Q07092 1604 aaPredicted RBP9.5□□□□□ -0.89
PMPCB-207ENST00000469560 HSP90AB2PQ58FF8 381 aa9.49□□□□□ -0.89
PMPCB-207ENST00000469560 ABCA3Q99758 1704 aa9.49□□□□□ -0.89
PMPCB-207ENST00000469560 COL18A1P39060 1754 aa9.49□□□□□ -0.89
PMPCB-207ENST00000469560 GCP02774 474 aa9.49□□□□□ -0.89
PMPCB-207ENST00000469560 IL13P35225 146 aa9.49□□□□□ -0.89
PMPCB-207ENST00000469560 RGPD1P0DJD0 1748 aa9.48□□□□□ -0.89
PMPCB-207ENST00000469560 IQSEC2Q5JU85 1478 aa9.48□□□□□ -0.89
PMPCB-207ENST00000469560 CDK12Q9NYV4 1490 aaPredicted RBP9.48□□□□□ -0.89
PMPCB-207ENST00000469560 LTN1O94822 1766 aa9.48□□□□□ -0.89
PMPCB-207ENST00000469560 POTEB2H3BUK9 544 aa9.48□□□□□ -0.89
PMPCB-207ENST00000469560 GALR2O43603 387 aaPredicted RBP9.48□□□□□ -0.89
PMPCB-207ENST00000469560 PIP4K2BP78356 416 aa9.48□□□□□ -0.89
PMPCB-207ENST00000469560 ARHGEF25Q86VW2 580 aa9.48□□□□□ -0.89
PMPCB-207ENST00000469560 AXIN2Q9Y2T1 843 aa9.48□□□□□ -0.89
PMPCB-207ENST00000469560 BLMP54132 1417 aaPredicted RBP9.48□□□□□ -0.89
PMPCB-207ENST00000469560 UBAP1LF5GYI3 381 aa9.47□□□□□ -0.89
PMPCB-207ENST00000469560 RASEFQ8IZ41 740 aa9.47□□□□□ -0.89
PMPCB-207ENST00000469560 RGPD5Q99666 1765 aa9.46□□□□□ -0.89
PMPCB-207ENST00000469560 PPM1GO15355 546 aaPredicted RBP9.46□□□□□ -0.89
PMPCB-207ENST00000469560 EIF4A2Q14240 407 aaKnown RBP9.46□□□□□ -0.89
PMPCB-207ENST00000469560 LMOD2Q6P5Q4 547 aa9.46□□□□□ -0.89
PMPCB-207ENST00000469560 HOXC9P31274 260 aa9.45□□□□□ -0.9
PMPCB-207ENST00000469560 HS6ST3Q8IZP7 471 aa9.45□□□□□ -0.9
PMPCB-207ENST00000469560 PLEKHF1Q96S99 279 aa9.45□□□□□ -0.9
PMPCB-207ENST00000469560 PHLPP1O60346 1717 aa9.45□□□□□ -0.9
PMPCB-207ENST00000469560 RGPD2P0DJD1 1756 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 289 ms