RNA–Protein interactions for RNA: ENST00000469506.3

TRAK1-207, Transcript of trafficking kinesin protein 1, humanhuman

TSL 2

Gene TRAK1, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-207ENST00000469506 SOX12O15370 315 aa26.95■■□□□ 1.9
TRAK1-207ENST00000469506 PTF1AQ7RTS3 328 aa26.95■■□□□ 1.9
TRAK1-207ENST00000469506 TOM1L2Q6ZVM7 507 aa26.94■■□□□ 1.9
TRAK1-207ENST00000469506 WDR17Q8IZU2 1322 aa26.93■■□□□ 1.9
TRAK1-207ENST00000469506 CD163L1Q9NR16 1453 aa26.92■■□□□ 1.9
TRAK1-207ENST00000469506 KTN1Q86UP2 1357 aaKnown RBP26.91■■□□□ 1.9
TRAK1-207ENST00000469506 TTC21AQ8NDW8 1320 aa26.9■■□□□ 1.9
TRAK1-207ENST00000469506 OVOS2A0A0G2JMS6 1433 aa26.9■■□□□ 1.9
TRAK1-207ENST00000469506 OVOS2A0A0J9YW53 1432 aa26.9■■□□□ 1.9
TRAK1-207ENST00000469506 OVOS2Q6IE36 1432 aa26.9■■□□□ 1.9
TRAK1-207ENST00000469506 DDB1Q16531 1140 aa26.9■■□□□ 1.9
TRAK1-207ENST00000469506 MARCH10Q8NA82 808 aaPredicted RBP26.89■■□□□ 1.9
TRAK1-207ENST00000469506 KCNH5Q8NCM2 988 aa26.88■■□□□ 1.89
TRAK1-207ENST00000469506 RGPD3A6NKT7 1758 aaPredicted RBP26.88■■□□□ 1.89
TRAK1-207ENST00000469506 RGPD4Q7Z3J3 1758 aa26.88■■□□□ 1.89
TRAK1-207ENST00000469506 USP54Q70EL1 1684 aa26.88■■□□□ 1.89
TRAK1-207ENST00000469506 SBNO2Q9Y2G9 1366 aa26.87■■□□□ 1.89
TRAK1-207ENST00000469506 LTN1O94822 1766 aa26.85■■□□□ 1.89
TRAK1-207ENST00000469506 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.85■■□□□ 1.89
TRAK1-207ENST00000469506 CARD10Q9BWT7 1032 aa26.85■■□□□ 1.89
TRAK1-207ENST00000469506 CARD11Q9BXL7 1154 aa26.85■■□□□ 1.89
TRAK1-207ENST00000469506 NME9Q86XW9 330 aa26.84■■□□□ 1.89
TRAK1-207ENST00000469506 NBPF14Q5TI25 921 aa26.83■■□□□ 1.89
TRAK1-207ENST00000469506 USP31Q70CQ4 1352 aa26.83■■□□□ 1.88
TRAK1-207ENST00000469506 C11orf95C9JLR9 678 aaPredicted RBP26.82■■□□□ 1.88
TRAK1-207ENST00000469506 PLSCR1O15162 318 aa26.82■■□□□ 1.88
TRAK1-207ENST00000469506 CSB-PGBD3P0DP91 1061 aa26.82■■□□□ 1.88
TRAK1-207ENST00000469506 PROM2Q8N271 834 aa26.82■■□□□ 1.88
TRAK1-207ENST00000469506 SLC12A5Q9H2X9 1139 aa26.82■■□□□ 1.88
TRAK1-207ENST00000469506 BCL11BQ9C0K0 894 aaPredicted RBP26.81■■□□□ 1.88
TRAK1-207ENST00000469506 ANO8Q9HCE9 1232 aaPredicted RBP26.81■■□□□ 1.88
TRAK1-207ENST00000469506 BCL9O00512 1426 aa26.8■■□□□ 1.88
TRAK1-207ENST00000469506 ABCC6O95255 1503 aa26.8■■□□□ 1.88
TRAK1-207ENST00000469506 CDCA7Q9BWT1 371 aaPredicted RBP26.79■■□□□ 1.88
TRAK1-207ENST00000469506 CASZ1Q86V15 1759 aa26.77■■□□□ 1.88
TRAK1-207ENST00000469506 TMC1Q8TDI8 760 aa26.77■■□□□ 1.88
TRAK1-207ENST00000469506 PDGFDQ9GZP0 370 aaPredicted RBP26.76■■□□□ 1.87
TRAK1-207ENST00000469506 CCDC7Q96M83 1385 aa26.74■■□□□ 1.87
TRAK1-207ENST00000469506 EXOC5O00471 708 aa26.74■■□□□ 1.87
TRAK1-207ENST00000469506 A0A1W2PP64 1363 aa26.73■■□□□ 1.87
TRAK1-207ENST00000469506 ERBB3P21860 1342 aa26.73■■□□□ 1.87
TRAK1-207ENST00000469506 KCNQ2O43526 872 aa26.73■■□□□ 1.87
TRAK1-207ENST00000469506 TNS2Q63HR2 1409 aa26.73■■□□□ 1.87
TRAK1-207ENST00000469506 TONSLQ96HA7 1378 aa26.72■■□□□ 1.87
TRAK1-207ENST00000469506 EDC4Q6P2E9 1401 aaKnown RBP26.72■■□□□ 1.87
TRAK1-207ENST00000469506 KAT6BQ8WYB5 2073 aa26.71■■□□□ 1.87
TRAK1-207ENST00000469506 TESK2Q96S53 571 aa26.71■■□□□ 1.87
TRAK1-207ENST00000469506 SPON1Q9HCB6 807 aa26.71■■□□□ 1.87
TRAK1-207ENST00000469506 NHSQ6T4R5 1651 aa26.7■■□□□ 1.87
TRAK1-207ENST00000469506 HDGFL2Q7Z4V5 671 aaPredicted RBP26.7■■□□□ 1.86
TRAK1-207ENST00000469506 NLRP2Q9NX02 1062 aa26.7■■□□□ 1.86
TRAK1-207ENST00000469506 TXNRD1Q16881 649 aa26.68■■□□□ 1.86
TRAK1-207ENST00000469506 ANKRD24Q8TF21 1146 aa26.67■■□□□ 1.86
TRAK1-207ENST00000469506 ST20-MTHFSA0A0A6YYL1 179 aa26.66■■□□□ 1.86
TRAK1-207ENST00000469506 ACSBG1Q96GR2 724 aa26.66■■□□□ 1.86
TRAK1-207ENST00000469506 PUS7Q96PZ0 661 aaKnown RBP26.66■■□□□ 1.86
TRAK1-207ENST00000469506 BTAF1O14981 1849 aa26.65■■□□□ 1.86
TRAK1-207ENST00000469506 TERF2IPQ9NYB0 399 aa26.65■■□□□ 1.86
TRAK1-207ENST00000469506 RGPD2P0DJD1 1756 aa26.65■■□□□ 1.86
TRAK1-207ENST00000469506 FBLN1P23142 703 aa26.64■■□□□ 1.86
TRAK1-207ENST00000469506 IL2RBP14784 551 aa26.63■■□□□ 1.85
TRAK1-207ENST00000469506 ZBTB7AO95365 584 aa26.61■■□□□ 1.85
TRAK1-207ENST00000469506 PPP1R1BQ9UD71 204 aaPredicted RBP26.61■■□□□ 1.85
TRAK1-207ENST00000469506 MYOM1P52179 1685 aa26.6■■□□□ 1.85
TRAK1-207ENST00000469506 IP6K1Q92551 441 aa26.6■■□□□ 1.85
TRAK1-207ENST00000469506 PAPPAQ13219 1627 aa26.59■■□□□ 1.85
TRAK1-207ENST00000469506 PTGER2P43116 358 aa26.58■■□□□ 1.85
TRAK1-207ENST00000469506 SLC15A2Q16348 729 aa26.58■■□□□ 1.85
TRAK1-207ENST00000469506 LTV1Q96GA3 475 aaPredicted RBP26.58■■□□□ 1.85
TRAK1-207ENST00000469506 FAM208AQ9UK61 1670 aaKnown RBP26.57■■□□□ 1.84
TRAK1-207ENST00000469506 ATF5Q9Y2D1 282 aaPredicted RBP26.57■■□□□ 1.84
TRAK1-207ENST00000469506 STK32BQ9NY57 414 aa26.56■■□□□ 1.84
TRAK1-207ENST00000469506 NINLQ9Y2I6 1382 aa26.56■■□□□ 1.84
TRAK1-207ENST00000469506 SHANK3Q9BYB0 1731 aa26.56■■□□□ 1.84
TRAK1-207ENST00000469506 MAP3K19Q56UN5 1328 aa26.55■■□□□ 1.84
TRAK1-207ENST00000469506 LRRC4BQ9NT99 713 aa26.53■■□□□ 1.84
TRAK1-207ENST00000469506 HOXC9P31274 260 aa26.52■■□□□ 1.84
TRAK1-207ENST00000469506 COG3Q96JB2 828 aa26.51■■□□□ 1.83
TRAK1-207ENST00000469506 ANKRD36BQ8N2N9 1353 aa26.5■■□□□ 1.83
TRAK1-207ENST00000469506 ZNF827Q17R98 1081 aa26.5■■□□□ 1.83
TRAK1-207ENST00000469506 DDX54Q8TDD1 881 aaKnown RBP26.5■■□□□ 1.83
TRAK1-207ENST00000469506 SGIP1Q9BQI5 828 aa26.5■■□□□ 1.83
TRAK1-207ENST00000469506 DOT1LQ8TEK3 1739 aa26.48■■□□□ 1.83
TRAK1-207ENST00000469506 YY1P25490 414 aa26.48■■□□□ 1.83
TRAK1-207ENST00000469506 FYB1O15117 783 aa26.47■■□□□ 1.83
TRAK1-207ENST00000469506 TUBGCP6Q96RT7 1819 aa26.46■■□□□ 1.83
TRAK1-207ENST00000469506 MEGF6O75095 1541 aa26.46■■□□□ 1.83
TRAK1-207ENST00000469506 RRS1Q15050 365 aaKnown RBP26.46■■□□□ 1.83
TRAK1-207ENST00000469506 GGNBP2Q9H3C7 697 aa26.46■■□□□ 1.83
TRAK1-207ENST00000469506 USP47Q96K76 1375 aa26.46■■□□□ 1.83
TRAK1-207ENST00000469506 AMPHP49418 695 aa26.45■■□□□ 1.82
TRAK1-207ENST00000469506 MTFR1LQ9H019 292 aa26.44■■□□□ 1.82
TRAK1-207ENST00000469506 KIF20BQ96Q89 1820 aa26.44■■□□□ 1.82
TRAK1-207ENST00000469506 LY75O60449 1722 aa26.43■■□□□ 1.82
TRAK1-207ENST00000469506 KCNQ4P56696 695 aa26.43■■□□□ 1.82
TRAK1-207ENST00000469506 NBPF6Q5VWK0 638 aa26.43■■□□□ 1.82
TRAK1-207ENST00000469506 NBPF4Q96M43 638 aa26.43■■□□□ 1.82
TRAK1-207ENST00000469506 FHDC1Q9C0D6 1143 aaPredicted RBP26.43■■□□□ 1.82
TRAK1-207ENST00000469506 NSD2O96028 1365 aa26.43■■□□□ 1.82
TRAK1-207ENST00000469506 PRIM1P49642 420 aaKnown RBP26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms