RNA–Protein interactions for RNA: ENST00000469455.1

TMC1-203, Transcript of transmembrane channel like 1, humanhuman

TSL 5

Gene TMC1, Length 679 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-203ENST00000469455 PTPRKQ15262 1439 aa10.19□□□□□ -0.78
TMC1-203ENST00000469455 FAM50AQ14320 339 aaKnown RBP10.19□□□□□ -0.78
TMC1-203ENST00000469455 ZNF687Q8N1G0 1237 aa10.19□□□□□ -0.78
TMC1-203ENST00000469455 CCDC97Q96F63 343 aaPredicted RBP10.19□□□□□ -0.78
TMC1-203ENST00000469455 PLSCR2Q9NRY7 297 aa10.19□□□□□ -0.78
TMC1-203ENST00000469455 FRMPD1Q5SYB0 1578 aa10.18□□□□□ -0.78
TMC1-203ENST00000469455 INO80Q9ULG1 1556 aaPredicted RBP10.18□□□□□ -0.78
TMC1-203ENST00000469455 MTMR2Q13614 643 aa10.18□□□□□ -0.78
TMC1-203ENST00000469455 NBPF3Q9H094 633 aa10.18□□□□□ -0.78
TMC1-203ENST00000469455 PLXNC1O60486 1568 aa10.18□□□□□ -0.78
TMC1-203ENST00000469455 ADGRL2O95490 1459 aa10.17□□□□□ -0.78
TMC1-203ENST00000469455 POGZQ7Z3K3 1410 aa10.17□□□□□ -0.78
TMC1-203ENST00000469455 TRAPPC8Q9Y2L5 1435 aa10.17□□□□□ -0.78
TMC1-203ENST00000469455 ST18O60284 1047 aa10.17□□□□□ -0.78
TMC1-203ENST00000469455 EMP3P54852 163 aa10.17□□□□□ -0.78
TMC1-203ENST00000469455 GUCA2AQ02747 115 aa10.17□□□□□ -0.78
TMC1-203ENST00000469455 SAMD7Q7Z3H4 446 aa10.17□□□□□ -0.78
TMC1-203ENST00000469455 HLA-CQ95604 372 aa10.17□□□□□ -0.78
TMC1-203ENST00000469455 ZFYVE16Q7Z3T8 1539 aa10.17□□□□□ -0.78
TMC1-203ENST00000469455 ZNF518AQ6AHZ1 1483 aa10.17□□□□□ -0.78
TMC1-203ENST00000469455 SCAPERQ9BY12 1400 aa10.16□□□□□ -0.78
TMC1-203ENST00000469455 KIDINS220Q9ULH0 1771 aa10.16□□□□□ -0.78
TMC1-203ENST00000469455 BHMG1C9JSJ3 638 aaPredicted RBP10.16□□□□□ -0.78
TMC1-203ENST00000469455 ABL2P42684 1182 aa10.16□□□□□ -0.78
TMC1-203ENST00000469455 TBC1D2BQ9UPU7 963 aa10.16□□□□□ -0.78
TMC1-203ENST00000469455 ZMYM4Q5VZL5 1548 aa10.16□□□□□ -0.78
TMC1-203ENST00000469455 C9orf84Q5VXU9 1444 aa10.16□□□□□ -0.78
TMC1-203ENST00000469455 HECW2Q9P2P5 1572 aa10.15□□□□□ -0.78
TMC1-203ENST00000469455 CFHP08603 1231 aa10.15□□□□□ -0.78
TMC1-203ENST00000469455 FUT2Q10981 343 aa10.15□□□□□ -0.78
TMC1-203ENST00000469455 GJD4Q96KN9 370 aaPredicted RBP10.15□□□□□ -0.78
TMC1-203ENST00000469455 ROCK1Q13464 1354 aa10.14□□□□□ -0.79
TMC1-203ENST00000469455 ATP7AQ04656 1500 aa10.14□□□□□ -0.79
TMC1-203ENST00000469455 TK2O00142 265 aa10.14□□□□□ -0.79
TMC1-203ENST00000469455 ATP6V1AP38606 617 aa10.14□□□□□ -0.79
TMC1-203ENST00000469455 HNRNPMP52272 730 aaKnown RBP eCLIP10.14□□□□□ -0.79
TMC1-203ENST00000469455 CTDSPL2Q05D32 466 aa10.14□□□□□ -0.79
TMC1-203ENST00000469455 LHX8Q68G74 356 aa10.14□□□□□ -0.79
TMC1-203ENST00000469455 HELBQ8NG08 1087 aaPredicted RBP10.14□□□□□ -0.79
TMC1-203ENST00000469455 NDUFB9Q9Y6M9 179 aa10.14□□□□□ -0.79
TMC1-203ENST00000469455 DENND4BO75064 1496 aaPredicted RBP10.14□□□□□ -0.79
TMC1-203ENST00000469455 HFM1A2PYH4 1435 aa10.14□□□□□ -0.79
TMC1-203ENST00000469455 ZFRQ96KR1 1074 aaKnown RBP10.13□□□□□ -0.79
TMC1-203ENST00000469455 RTEL1-TNFRSF6BF6WH68 1400 aa10.13□□□□□ -0.79
TMC1-203ENST00000469455 DHX57Q6P158 1386 aaKnown RBP10.13□□□□□ -0.79
TMC1-203ENST00000469455 MLH3Q9UHC1 1453 aa10.12□□□□□ -0.79
TMC1-203ENST00000469455 FAM205CA6NFA0 338 aa10.12□□□□□ -0.79
TMC1-203ENST00000469455 C6orf229H3BNL8 230 aa10.12□□□□□ -0.79
TMC1-203ENST00000469455 NECTIN2Q92692 538 aa10.12□□□□□ -0.79
TMC1-203ENST00000469455 MARVELD3Q96A59 401 aa10.12□□□□□ -0.79
TMC1-203ENST00000469455 NAIPQ13075 1403 aa10.12□□□□□ -0.79
TMC1-203ENST00000469455 NCOA1Q15788 1441 aa10.12□□□□□ -0.79
TMC1-203ENST00000469455 ABCA6Q8N139 1617 aa10.11□□□□□ -0.79
TMC1-203ENST00000469455 COL17A1Q9UMD9 1497 aaPredicted RBP10.11□□□□□ -0.79
TMC1-203ENST00000469455 ITGAEP38570 1179 aa10.11□□□□□ -0.79
TMC1-203ENST00000469455 KMT5BQ4FZB7 885 aa10.11□□□□□ -0.79
TMC1-203ENST00000469455 CFAP99D6REC4 459 aa10.1□□□□□ -0.79
TMC1-203ENST00000469455 RNF40O75150 1001 aa10.1□□□□□ -0.79
TMC1-203ENST00000469455 MRPL50Q8N5N7 158 aaKnown RBP10.1□□□□□ -0.79
TMC1-203ENST00000469455 CALR3Q96L12 384 aaKnown RBP10.1□□□□□ -0.79
TMC1-203ENST00000469455 KDM6BO15054 1643 aa10.1□□□□□ -0.79
TMC1-203ENST00000469455 ANKRD30AQ9BXX3 1397 aa10.1□□□□□ -0.79
TMC1-203ENST00000469455 DIP2CQ9Y2E4 1556 aa10.09□□□□□ -0.79
TMC1-203ENST00000469455 TSPY4P0CV99 314 aa10.09□□□□□ -0.79
TMC1-203ENST00000469455 TSPY10P0CW01 314 aa10.09□□□□□ -0.79
TMC1-203ENST00000469455 PDIA4P13667 645 aaKnown RBP10.09□□□□□ -0.79
TMC1-203ENST00000469455 AFAP1Q8N556 730 aa10.09□□□□□ -0.79
TMC1-203ENST00000469455 TSC1Q92574 1164 aa10.09□□□□□ -0.79
TMC1-203ENST00000469455 HMX1Q9NP08 348 aaPredicted RBP10.09□□□□□ -0.79
TMC1-203ENST00000469455 BCORL1Q5H9F3 1711 aa10.09□□□□□ -0.79
TMC1-203ENST00000469455 MAGI2Q86UL8 1455 aa10.09□□□□□ -0.79
TMC1-203ENST00000469455 SPAG9O60271 1321 aaKnown RBP10.08□□□□□ -0.8
TMC1-203ENST00000469455 SETD5Q9C0A6 1442 aa10.08□□□□□ -0.8
TMC1-203ENST00000469455 ARHGEF40Q8TER5 1519 aa10.08□□□□□ -0.8
TMC1-203ENST00000469455 DUOX2Q9NRD8 1548 aa10.08□□□□□ -0.8
TMC1-203ENST00000469455 EIF2AK4Q9P2K8 1649 aaKnown RBP10.08□□□□□ -0.8
TMC1-203ENST00000469455 CENPBP07199 599 aaPredicted RBP10.08□□□□□ -0.8
TMC1-203ENST00000469455 IRF5Q13568 498 aa10.08□□□□□ -0.8
TMC1-203ENST00000469455 WASHC4Q2M389 1173 aa10.08□□□□□ -0.8
TMC1-203ENST00000469455 TRIM34Q9BYJ4 488 aa10.08□□□□□ -0.8
TMC1-203ENST00000469455 CHIC2Q9UKJ5 165 aa10.08□□□□□ -0.8
TMC1-203ENST00000469455 KIF15Q9NS87 1388 aa10.08□□□□□ -0.8
TMC1-203ENST00000469455 REREQ9P2R6 1566 aa10.07□□□□□ -0.8
TMC1-203ENST00000469455 POM121CA8CG34 1229 aa10.07□□□□□ -0.8
TMC1-203ENST00000469455 ACTN4O43707 911 aaKnown RBP10.07□□□□□ -0.8
TMC1-203ENST00000469455 LRRN4Q8WUT4 740 aa10.07□□□□□ -0.8
TMC1-203ENST00000469455 GLMNQ92990 594 aa10.07□□□□□ -0.8
TMC1-203ENST00000469455 LRCH3Q96II8 777 aa10.07□□□□□ -0.8
TMC1-203ENST00000469455 ACIN1Q9UKV3 1341 aaKnown RBP10.07□□□□□ -0.8
TMC1-203ENST00000469455 RAB3GAP2Q9H2M9 1393 aa10.06□□□□□ -0.8
TMC1-203ENST00000469455 RAPGEF3O95398 923 aa10.06□□□□□ -0.8
TMC1-203ENST00000469455 MORN1Q5T089 497 aa10.06□□□□□ -0.8
TMC1-203ENST00000469455 PRR7Q8TB68 274 aa10.06□□□□□ -0.8
TMC1-203ENST00000469455 SYMPKQ92797 1274 aaKnown RBP10.06□□□□□ -0.8
TMC1-203ENST00000469455 DEPDC5O75140 1603 aa10.06□□□□□ -0.8
TMC1-203ENST00000469455 ERBINQ96RT1 1412 aa10.06□□□□□ -0.8
TMC1-203ENST00000469455 UNC13BO14795 1591 aa10.05□□□□□ -0.8
TMC1-203ENST00000469455 Q3C1V9 767 aa10.05□□□□□ -0.8
TMC1-203ENST00000469455 ADGRD1Q6QNK2 874 aa10.05□□□□□ -0.8
TMC1-203ENST00000469455 RETREG3Q86VR2 466 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms