RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 PROM2Q8N271 834 aa17.54■□□□□ 0.4
HDAC3-204ENST00000469207 RGPD5Q99666 1765 aa17.53■□□□□ 0.4
HDAC3-204ENST00000469207 KCNH5Q8NCM2 988 aa17.53■□□□□ 0.4
HDAC3-204ENST00000469207 OVOS2A0A0G2JMS6 1433 aa17.53■□□□□ 0.4
HDAC3-204ENST00000469207 OVOS2A0A0J9YW53 1432 aa17.53■□□□□ 0.4
HDAC3-204ENST00000469207 CPSF1Q10570 1443 aaKnown RBP17.53■□□□□ 0.4
HDAC3-204ENST00000469207 OVOS2Q6IE36 1432 aa17.53■□□□□ 0.4
HDAC3-204ENST00000469207 KTN1Q86UP2 1357 aaKnown RBP17.53■□□□□ 0.4
HDAC3-204ENST00000469207 PEAK1Q9H792 1746 aa17.52■□□□□ 0.4
HDAC3-204ENST00000469207 PDGFDQ9GZP0 370 aaPredicted RBP17.52■□□□□ 0.4
HDAC3-204ENST00000469207 ANO8Q9HCE9 1232 aaPredicted RBP17.52■□□□□ 0.4
HDAC3-204ENST00000469207 TTC21AQ8NDW8 1320 aa17.51■□□□□ 0.39
HDAC3-204ENST00000469207 LRRC37A3O60309 1634 aa17.51■□□□□ 0.39
HDAC3-204ENST00000469207 PLSCR1O15162 318 aa17.51■□□□□ 0.39
HDAC3-204ENST00000469207 NME9Q86XW9 330 aa17.51■□□□□ 0.39
HDAC3-204ENST00000469207 CARD10Q9BWT7 1032 aa17.51■□□□□ 0.39
HDAC3-204ENST00000469207 BCL11BQ9C0K0 894 aaPredicted RBP17.51■□□□□ 0.39
HDAC3-204ENST00000469207 TMC1Q8TDI8 760 aa17.5■□□□□ 0.39
HDAC3-204ENST00000469207 SLC12A5Q9H2X9 1139 aa17.5■□□□□ 0.39
HDAC3-204ENST00000469207 SBF2Q86WG5 1849 aa17.49■□□□□ 0.39
HDAC3-204ENST00000469207 AKAP12Q02952 1782 aa17.49■□□□□ 0.39
HDAC3-204ENST00000469207 EXOC5O00471 708 aa17.49■□□□□ 0.39
HDAC3-204ENST00000469207 KCNQ2O43526 872 aa17.49■□□□□ 0.39
HDAC3-204ENST00000469207 CARD11Q9BXL7 1154 aa17.49■□□□□ 0.39
HDAC3-204ENST00000469207 C11orf95C9JLR9 678 aaPredicted RBP17.48■□□□□ 0.39
HDAC3-204ENST00000469207 SPON1Q9HCB6 807 aa17.48■□□□□ 0.39
HDAC3-204ENST00000469207 CDCA7Q9BWT1 371 aaPredicted RBP17.47■□□□□ 0.39
HDAC3-204ENST00000469207 NFAT5O94916 1531 aa17.47■□□□□ 0.39
HDAC3-204ENST00000469207 CD163L1Q9NR16 1453 aa17.46■□□□□ 0.39
HDAC3-204ENST00000469207 ACSBG1Q96GR2 724 aa17.46■□□□□ 0.39
HDAC3-204ENST00000469207 PPP1R1BQ9UD71 204 aaPredicted RBP17.46■□□□□ 0.39
HDAC3-204ENST00000469207 SBNO2Q9Y2G9 1366 aa17.45■□□□□ 0.38
HDAC3-204ENST00000469207 NLRP2Q9NX02 1062 aa17.45■□□□□ 0.38
HDAC3-204ENST00000469207 ZBTB7AO95365 584 aa17.44■□□□□ 0.38
HDAC3-204ENST00000469207 TXNRD1Q16881 649 aa17.44■□□□□ 0.38
HDAC3-204ENST00000469207 USP31Q70CQ4 1352 aa17.43■□□□□ 0.38
HDAC3-204ENST00000469207 FBLN1P23142 703 aa17.43■□□□□ 0.38
HDAC3-204ENST00000469207 ATF5Q9Y2D1 282 aaPredicted RBP17.43■□□□□ 0.38
HDAC3-204ENST00000469207 WNK3Q9BYP7 1800 aa17.42■□□□□ 0.38
HDAC3-204ENST00000469207 CCDC7Q96M83 1385 aa17.41■□□□□ 0.38
HDAC3-204ENST00000469207 HDGFL2Q7Z4V5 671 aaPredicted RBP17.41■□□□□ 0.38
HDAC3-204ENST00000469207 ANKRD24Q8TF21 1146 aa17.41■□□□□ 0.38
HDAC3-204ENST00000469207 ERBB3P21860 1342 aa17.41■□□□□ 0.38
HDAC3-204ENST00000469207 MON2Q7Z3U7 1717 aa17.41■□□□□ 0.38
HDAC3-204ENST00000469207 BCL9O00512 1426 aa17.4■□□□□ 0.38
HDAC3-204ENST00000469207 IL2RBP14784 551 aa17.39■□□□□ 0.37
HDAC3-204ENST00000469207 YY1P25490 414 aa17.39■□□□□ 0.37
HDAC3-204ENST00000469207 SLC15A2Q16348 729 aa17.39■□□□□ 0.37
HDAC3-204ENST00000469207 LTV1Q96GA3 475 aaPredicted RBP17.39■□□□□ 0.37
HDAC3-204ENST00000469207 A0A1W2PP64 1363 aa17.39■□□□□ 0.37
HDAC3-204ENST00000469207 PTGER2P43116 358 aa17.38■□□□□ 0.37
HDAC3-204ENST00000469207 STK32BQ9NY57 414 aa17.38■□□□□ 0.37
HDAC3-204ENST00000469207 ST20-MTHFSA0A0A6YYL1 179 aa17.37■□□□□ 0.37
HDAC3-204ENST00000469207 TERF2IPQ9NYB0 399 aa17.37■□□□□ 0.37
HDAC3-204ENST00000469207 RGPD3A6NKT7 1758 aaPredicted RBP17.37■□□□□ 0.37
HDAC3-204ENST00000469207 RGPD4Q7Z3J3 1758 aa17.37■□□□□ 0.37
HDAC3-204ENST00000469207 TONSLQ96HA7 1378 aa17.37■□□□□ 0.37
HDAC3-204ENST00000469207 CASZ1Q86V15 1759 aa17.36■□□□□ 0.37
HDAC3-204ENST00000469207 TESK2Q96S53 571 aa17.36■□□□□ 0.37
HDAC3-204ENST00000469207 TNS2Q63HR2 1409 aa17.36■□□□□ 0.37
HDAC3-204ENST00000469207 LTN1O94822 1766 aa17.35■□□□□ 0.37
HDAC3-204ENST00000469207 DDX54Q8TDD1 881 aaKnown RBP17.35■□□□□ 0.37
HDAC3-204ENST00000469207 EDC4Q6P2E9 1401 aaKnown RBP17.35■□□□□ 0.37
HDAC3-204ENST00000469207 IP6K1Q92551 441 aa17.34■□□□□ 0.37
HDAC3-204ENST00000469207 NINLQ9Y2I6 1382 aa17.33■□□□□ 0.36
HDAC3-204ENST00000469207 LRRC4BQ9NT99 713 aa17.33■□□□□ 0.36
HDAC3-204ENST00000469207 KAT6BQ8WYB5 2073 aa17.33■□□□□ 0.36
HDAC3-204ENST00000469207 KCNQ4P56696 695 aa17.32■□□□□ 0.36
HDAC3-204ENST00000469207 ABCC6O95255 1503 aa17.31■□□□□ 0.36
HDAC3-204ENST00000469207 ZNF827Q17R98 1081 aa17.31■□□□□ 0.36
HDAC3-204ENST00000469207 PUS7Q96PZ0 661 aaKnown RBP17.31■□□□□ 0.36
HDAC3-204ENST00000469207 FHDC1Q9C0D6 1143 aaPredicted RBP17.31■□□□□ 0.36
HDAC3-204ENST00000469207 USP54Q70EL1 1684 aa17.31■□□□□ 0.36
HDAC3-204ENST00000469207 MAP3K19Q56UN5 1328 aa17.3■□□□□ 0.36
HDAC3-204ENST00000469207 DCAF8L1A6NGE4 600 aa17.3■□□□□ 0.36
HDAC3-204ENST00000469207 SGIP1Q9BQI5 828 aa17.3■□□□□ 0.36
HDAC3-204ENST00000469207 SYT17Q9BSW7 474 aa17.3■□□□□ 0.36
HDAC3-204ENST00000469207 NHSQ6T4R5 1651 aa17.29■□□□□ 0.36
HDAC3-204ENST00000469207 HOXC9P31274 260 aa17.29■□□□□ 0.36
HDAC3-204ENST00000469207 AMPHP49418 695 aa17.29■□□□□ 0.36
HDAC3-204ENST00000469207 COG3Q96JB2 828 aa17.29■□□□□ 0.36
HDAC3-204ENST00000469207 MTFR1LQ9H019 292 aa17.29■□□□□ 0.36
HDAC3-204ENST00000469207 MYOM1P52179 1685 aa17.29■□□□□ 0.36
HDAC3-204ENST00000469207 RRS1Q15050 365 aaKnown RBP17.28■□□□□ 0.36
HDAC3-204ENST00000469207 SYTL4Q96C24 671 aaPredicted RBP17.28■□□□□ 0.36
HDAC3-204ENST00000469207 BTAF1O14981 1849 aa17.27■□□□□ 0.36
HDAC3-204ENST00000469207 PRIM1P49642 420 aaKnown RBP17.27■□□□□ 0.36
HDAC3-204ENST00000469207 GGNBP2Q9H3C7 697 aa17.27■□□□□ 0.36
HDAC3-204ENST00000469207 UTRNP46939 3433 aa17.26■□□□□ 0.35
HDAC3-204ENST00000469207 FYB1O15117 783 aa17.25■□□□□ 0.35
HDAC3-204ENST00000469207 NBPF6Q5VWK0 638 aa17.25■□□□□ 0.35
HDAC3-204ENST00000469207 USHBP1Q8N6Y0 703 aa17.25■□□□□ 0.35
HDAC3-204ENST00000469207 NBPF4Q96M43 638 aa17.25■□□□□ 0.35
HDAC3-204ENST00000469207 AKT1S1Q96B36 256 aa17.24■□□□□ 0.35
HDAC3-204ENST00000469207 ARXQ96QS3 562 aa17.24■□□□□ 0.35
HDAC3-204ENST00000469207 RGPD2P0DJD1 1756 aa17.24■□□□□ 0.35
HDAC3-204ENST00000469207 ZCRB1Q8TBF4 217 aaKnown RBP17.23■□□□□ 0.35
HDAC3-204ENST00000469207 PAPPAQ13219 1627 aa17.22■□□□□ 0.35
HDAC3-204ENST00000469207 ANKRD36BQ8N2N9 1353 aa17.21■□□□□ 0.35
HDAC3-204ENST00000469207 MEGF6O75095 1541 aa17.21■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms