RNA–Protein interactions for RNA: ENST00000469093.1

COL5A1-207, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 670 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-207ENST00000469093 OVOS2Q6IE36 1432 aa17.53■□□□□ 0.4
COL5A1-207ENST00000469093 CARD10Q9BWT7 1032 aa17.52■□□□□ 0.4
COL5A1-207ENST00000469093 TTC21AQ8NDW8 1320 aa17.51■□□□□ 0.39
COL5A1-207ENST00000469093 COL18A1P39060 1754 aa17.51■□□□□ 0.39
COL5A1-207ENST00000469093 CSB-PGBD3P0DP91 1061 aa17.51■□□□□ 0.39
COL5A1-207ENST00000469093 CPSF1Q10570 1443 aaKnown RBP17.51■□□□□ 0.39
COL5A1-207ENST00000469093 PROM2Q8N271 834 aa17.51■□□□□ 0.39
COL5A1-207ENST00000469093 KCNQ2O43526 872 aa17.5■□□□□ 0.39
COL5A1-207ENST00000469093 SPON1Q9HCB6 807 aa17.5■□□□□ 0.39
COL5A1-207ENST00000469093 PIK3C2AO00443 1686 aa17.5■□□□□ 0.39
COL5A1-207ENST00000469093 RREB1Q92766 1687 aa17.5■□□□□ 0.39
COL5A1-207ENST00000469093 TRPM1Q7Z4N2 1603 aa17.49■□□□□ 0.39
COL5A1-207ENST00000469093 KTN1Q86UP2 1357 aaKnown RBP17.49■□□□□ 0.39
COL5A1-207ENST00000469093 NUP188Q5SRE5 1749 aa17.49■□□□□ 0.39
COL5A1-207ENST00000469093 PEAK1Q9H792 1746 aa17.49■□□□□ 0.39
COL5A1-207ENST00000469093 EXOC5O00471 708 aa17.48■□□□□ 0.39
COL5A1-207ENST00000469093 BCL9O00512 1426 aa17.47■□□□□ 0.39
COL5A1-207ENST00000469093 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.47■□□□□ 0.39
COL5A1-207ENST00000469093 ANO8Q9HCE9 1232 aaPredicted RBP17.47■□□□□ 0.39
COL5A1-207ENST00000469093 PPP1R1BQ9UD71 204 aaPredicted RBP17.46■□□□□ 0.39
COL5A1-207ENST00000469093 LRRC37A3O60309 1634 aa17.46■□□□□ 0.39
COL5A1-207ENST00000469093 USP31Q70CQ4 1352 aa17.44■□□□□ 0.38
COL5A1-207ENST00000469093 NME9Q86XW9 330 aa17.44■□□□□ 0.38
COL5A1-207ENST00000469093 CARD11Q9BXL7 1154 aa17.44■□□□□ 0.38
COL5A1-207ENST00000469093 PDGFDQ9GZP0 370 aaPredicted RBP17.44■□□□□ 0.38
COL5A1-207ENST00000469093 SLC12A5Q9H2X9 1139 aa17.44■□□□□ 0.38
COL5A1-207ENST00000469093 SBF2Q86WG5 1849 aa17.44■□□□□ 0.38
COL5A1-207ENST00000469093 CCDC7Q96M83 1385 aa17.43■□□□□ 0.38
COL5A1-207ENST00000469093 SBNO2Q9Y2G9 1366 aa17.43■□□□□ 0.38
COL5A1-207ENST00000469093 TXNRD1Q16881 649 aa17.43■□□□□ 0.38
COL5A1-207ENST00000469093 TMC1Q8TDI8 760 aa17.43■□□□□ 0.38
COL5A1-207ENST00000469093 AKAP12Q02952 1782 aa17.43■□□□□ 0.38
COL5A1-207ENST00000469093 NFAT5O94916 1531 aa17.42■□□□□ 0.38
COL5A1-207ENST00000469093 RGPD5Q99666 1765 aa17.42■□□□□ 0.38
COL5A1-207ENST00000469093 NLRP2Q9NX02 1062 aa17.41■□□□□ 0.38
COL5A1-207ENST00000469093 CD163L1Q9NR16 1453 aa17.4■□□□□ 0.38
COL5A1-207ENST00000469093 ERBB3P21860 1342 aa17.4■□□□□ 0.38
COL5A1-207ENST00000469093 ZBTB7AO95365 584 aa17.39■□□□□ 0.37
COL5A1-207ENST00000469093 YY1P25490 414 aa17.39■□□□□ 0.37
COL5A1-207ENST00000469093 HDGFL2Q7Z4V5 671 aaPredicted RBP17.39■□□□□ 0.37
COL5A1-207ENST00000469093 RGPD3A6NKT7 1758 aaPredicted RBP17.38■□□□□ 0.37
COL5A1-207ENST00000469093 RGPD4Q7Z3J3 1758 aa17.38■□□□□ 0.37
COL5A1-207ENST00000469093 IL2RBP14784 551 aa17.38■□□□□ 0.37
COL5A1-207ENST00000469093 SLC15A2Q16348 729 aa17.38■□□□□ 0.37
COL5A1-207ENST00000469093 STK32BQ9NY57 414 aa17.38■□□□□ 0.37
COL5A1-207ENST00000469093 NINLQ9Y2I6 1382 aa17.38■□□□□ 0.37
COL5A1-207ENST00000469093 PTGER2P43116 358 aa17.37■□□□□ 0.37
COL5A1-207ENST00000469093 ACSBG1Q96GR2 724 aa17.37■□□□□ 0.37
COL5A1-207ENST00000469093 PUS7Q96PZ0 661 aaKnown RBP17.37■□□□□ 0.37
COL5A1-207ENST00000469093 TERF2IPQ9NYB0 399 aa17.37■□□□□ 0.37
COL5A1-207ENST00000469093 ATF5Q9Y2D1 282 aaPredicted RBP17.37■□□□□ 0.37
COL5A1-207ENST00000469093 DCAF8L1A6NGE4 600 aa17.36■□□□□ 0.37
COL5A1-207ENST00000469093 ANKRD24Q8TF21 1146 aa17.36■□□□□ 0.37
COL5A1-207ENST00000469093 ABCC6O95255 1503 aa17.36■□□□□ 0.37
COL5A1-207ENST00000469093 MON2Q7Z3U7 1717 aa17.35■□□□□ 0.37
COL5A1-207ENST00000469093 WNK3Q9BYP7 1800 aa17.35■□□□□ 0.37
COL5A1-207ENST00000469093 TNS2Q63HR2 1409 aa17.35■□□□□ 0.37
COL5A1-207ENST00000469093 EDC4Q6P2E9 1401 aaKnown RBP17.34■□□□□ 0.37
COL5A1-207ENST00000469093 A0A1W2PP64 1363 aa17.33■□□□□ 0.36
COL5A1-207ENST00000469093 IP6K1Q92551 441 aa17.33■□□□□ 0.36
COL5A1-207ENST00000469093 CASZ1Q86V15 1759 aa17.33■□□□□ 0.36
COL5A1-207ENST00000469093 TESK2Q96S53 571 aa17.32■□□□□ 0.36
COL5A1-207ENST00000469093 TONSLQ96HA7 1378 aa17.31■□□□□ 0.36
COL5A1-207ENST00000469093 MTFR1LQ9H019 292 aa17.31■□□□□ 0.36
COL5A1-207ENST00000469093 ST20-MTHFSA0A0A6YYL1 179 aa17.3■□□□□ 0.36
COL5A1-207ENST00000469093 LTV1Q96GA3 475 aaPredicted RBP17.3■□□□□ 0.36
COL5A1-207ENST00000469093 SGIP1Q9BQI5 828 aa17.3■□□□□ 0.36
COL5A1-207ENST00000469093 SYT17Q9BSW7 474 aa17.3■□□□□ 0.36
COL5A1-207ENST00000469093 USP54Q70EL1 1684 aa17.29■□□□□ 0.36
COL5A1-207ENST00000469093 FBLN1P23142 703 aa17.29■□□□□ 0.36
COL5A1-207ENST00000469093 DDX54Q8TDD1 881 aaKnown RBP17.29■□□□□ 0.36
COL5A1-207ENST00000469093 LRRC4BQ9NT99 713 aa17.29■□□□□ 0.36
COL5A1-207ENST00000469093 KAT6BQ8WYB5 2073 aa17.28■□□□□ 0.36
COL5A1-207ENST00000469093 FHDC1Q9C0D6 1143 aaPredicted RBP17.28■□□□□ 0.36
COL5A1-207ENST00000469093 COG3Q96JB2 828 aa17.27■□□□□ 0.36
COL5A1-207ENST00000469093 LTN1O94822 1766 aa17.27■□□□□ 0.35
COL5A1-207ENST00000469093 MAP3K19Q56UN5 1328 aa17.26■□□□□ 0.35
COL5A1-207ENST00000469093 HOXC9P31274 260 aa17.26■□□□□ 0.35
COL5A1-207ENST00000469093 ZNF827Q17R98 1081 aa17.26■□□□□ 0.35
COL5A1-207ENST00000469093 NHSQ6T4R5 1651 aa17.26■□□□□ 0.35
COL5A1-207ENST00000469093 SLC24A1O60721 1099 aa17.25■□□□□ 0.35
COL5A1-207ENST00000469093 AMPHP49418 695 aa17.24■□□□□ 0.35
COL5A1-207ENST00000469093 ARXQ96QS3 562 aa17.24■□□□□ 0.35
COL5A1-207ENST00000469093 PRIM1P49642 420 aaKnown RBP17.23■□□□□ 0.35
COL5A1-207ENST00000469093 SLC27A3Q5K4L6 730 aa17.23■□□□□ 0.35
COL5A1-207ENST00000469093 AKT1S1Q96B36 256 aa17.23■□□□□ 0.35
COL5A1-207ENST00000469093 MYOM1P52179 1685 aa17.23■□□□□ 0.35
COL5A1-207ENST00000469093 FYB1O15117 783 aa17.21■□□□□ 0.35
COL5A1-207ENST00000469093 KCNQ4P56696 695 aa17.21■□□□□ 0.35
COL5A1-207ENST00000469093 ZCRB1Q8TBF4 217 aaKnown RBP17.21■□□□□ 0.35
COL5A1-207ENST00000469093 SYTL4Q96C24 671 aaPredicted RBP17.21■□□□□ 0.35
COL5A1-207ENST00000469093 BTAF1O14981 1849 aa17.21■□□□□ 0.35
COL5A1-207ENST00000469093 NBPF6Q5VWK0 638 aa17.2■□□□□ 0.34
COL5A1-207ENST00000469093 NBPF4Q96M43 638 aa17.2■□□□□ 0.34
COL5A1-207ENST00000469093 PAPPAQ13219 1627 aa17.2■□□□□ 0.34
COL5A1-207ENST00000469093 ANKRD36BQ8N2N9 1353 aa17.19■□□□□ 0.34
COL5A1-207ENST00000469093 RRS1Q15050 365 aaKnown RBP17.19■□□□□ 0.34
COL5A1-207ENST00000469093 SLC16A10Q8TF71 515 aa17.19■□□□□ 0.34
COL5A1-207ENST00000469093 GGNBP2Q9H3C7 697 aa17.19■□□□□ 0.34
COL5A1-207ENST00000469093 TMF1P82094 1093 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms