RNA–Protein interactions for RNA: ENST00000469066.1

BRPF1-207, Transcript of bromodomain and PHD finger containing 1, humanhuman

TSL 3

Gene BRPF1, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1-207ENST00000469066 KRT27Q7Z3Y8 459 aa13.35□□□□□ -0.27
BRPF1-207ENST00000469066 CCDC125Q86Z20 511 aa13.35□□□□□ -0.27
BRPF1-207ENST00000469066 TCP11L2Q8N4U5 519 aa13.35□□□□□ -0.27
BRPF1-207ENST00000469066 CCDC9Q9Y3X0 531 aaKnown RBP13.35□□□□□ -0.27
BRPF1-207ENST00000469066 IP6K1Q92551 441 aa13.34□□□□□ -0.27
BRPF1-207ENST00000469066 CARD10Q9BWT7 1032 aa13.34□□□□□ -0.27
BRPF1-207ENST00000469066 WDR17Q8IZU2 1322 aa13.34□□□□□ -0.27
BRPF1-207ENST00000469066 CRB1P82279 1406 aa13.32□□□□□ -0.28
BRPF1-207ENST00000469066 COG3Q96JB2 828 aa13.32□□□□□ -0.28
BRPF1-207ENST00000469066 GGNBP2Q9H3C7 697 aa13.32□□□□□ -0.28
BRPF1-207ENST00000469066 SOX12O15370 315 aa13.31□□□□□ -0.28
BRPF1-207ENST00000469066 PER1O15534 1290 aaPredicted RBP13.31□□□□□ -0.28
BRPF1-207ENST00000469066 PANK3Q9H999 370 aa13.31□□□□□ -0.28
BRPF1-207ENST00000469066 MAP3K19Q56UN5 1328 aa13.31□□□□□ -0.28
BRPF1-207ENST00000469066 USP35Q9P2H5 1018 aa13.3□□□□□ -0.28
BRPF1-207ENST00000469066 ERBB3P21860 1342 aa13.3□□□□□ -0.28
BRPF1-207ENST00000469066 THSD7AQ9UPZ6 1657 aa13.3□□□□□ -0.28
BRPF1-207ENST00000469066 ABCC6O95255 1503 aa13.29□□□□□ -0.28
BRPF1-207ENST00000469066 FAM182BQ5T319 152 aa13.29□□□□□ -0.28
BRPF1-207ENST00000469066 KIF7Q2M1P5 1343 aa13.29□□□□□ -0.28
BRPF1-207ENST00000469066 HOXC9P31274 260 aa13.28□□□□□ -0.28
BRPF1-207ENST00000469066 TOM1L2Q6ZVM7 507 aa13.28□□□□□ -0.28
BRPF1-207ENST00000469066 ANKRD24Q8TF21 1146 aa13.28□□□□□ -0.28
BRPF1-207ENST00000469066 DISP2A7MBM2 1401 aa13.28□□□□□ -0.28
BRPF1-207ENST00000469066 MYOM1P52179 1685 aa13.28□□□□□ -0.28
BRPF1-207ENST00000469066 BRWD3Q6RI45 1802 aa13.27□□□□□ -0.28
BRPF1-207ENST00000469066 ZBTB7CA1YPR0 619 aa13.27□□□□□ -0.29
BRPF1-207ENST00000469066 CDCA7Q9BWT1 371 aaPredicted RBP13.27□□□□□ -0.29
BRPF1-207ENST00000469066 BLMP54132 1417 aaPredicted RBP13.26□□□□□ -0.29
BRPF1-207ENST00000469066 RRS1Q15050 365 aaKnown RBP13.26□□□□□ -0.29
BRPF1-207ENST00000469066 FAM196AQ6ZSG2 479 aa13.26□□□□□ -0.29
BRPF1-207ENST00000469066 MARCH10Q8NA82 808 aaPredicted RBP13.26□□□□□ -0.29
BRPF1-207ENST00000469066 NSD3Q9BZ95 1437 aa13.26□□□□□ -0.29
BRPF1-207ENST00000469066 KIF24Q5T7B8 1368 aa13.25□□□□□ -0.29
BRPF1-207ENST00000469066 CGNL1Q0VF96 1302 aa13.25□□□□□ -0.29
BRPF1-207ENST00000469066 HSP90AB2PQ58FF8 381 aa13.25□□□□□ -0.29
BRPF1-207ENST00000469066 POLKQ9UBT6 870 aa13.25□□□□□ -0.29
BRPF1-207ENST00000469066 CCDC7Q96M83 1385 aa13.24□□□□□ -0.29
BRPF1-207ENST00000469066 WASHC2AQ641Q2 1341 aa13.24□□□□□ -0.29
BRPF1-207ENST00000469066 PDE3BQ13370 1112 aa13.24□□□□□ -0.29
BRPF1-207ENST00000469066 AMER1Q5JTC6 1135 aaPredicted RBP13.24□□□□□ -0.29
BRPF1-207ENST00000469066 BCL9O00512 1426 aa13.23□□□□□ -0.29
BRPF1-207ENST00000469066 NBPF6Q5VWK0 638 aa13.23□□□□□ -0.29
BRPF1-207ENST00000469066 NBPF4Q96M43 638 aa13.23□□□□□ -0.29
BRPF1-207ENST00000469066 SRCAPQ6ZRS2 3230 aa13.23□□□□□ -0.29
BRPF1-207ENST00000469066 INSRP06213 1382 aa13.22□□□□□ -0.29
BRPF1-207ENST00000469066 EXOC5O00471 708 aa13.22□□□□□ -0.29
BRPF1-207ENST00000469066 AMPHP49418 695 aa13.22□□□□□ -0.29
BRPF1-207ENST00000469066 DDB1Q16531 1140 aa13.22□□□□□ -0.29
BRPF1-207ENST00000469066 DEFB132Q7Z7B7 95 aa13.22□□□□□ -0.29
BRPF1-207ENST00000469066 CAMKK2Q96RR4 588 aa13.22□□□□□ -0.29
BRPF1-207ENST00000469066 NLRP2Q9NX02 1062 aa13.22□□□□□ -0.29
BRPF1-207ENST00000469066 EMILIN1Q9Y6C2 1016 aa13.22□□□□□ -0.29
BRPF1-207ENST00000469066 RGPD5Q99666 1765 aa13.22□□□□□ -0.29
BRPF1-207ENST00000469066 RTL1A6NKG5 1358 aa13.21□□□□□ -0.29
BRPF1-207ENST00000469066 CSB-PGBD3P0DP91 1061 aa13.21□□□□□ -0.29
BRPF1-207ENST00000469066 A0A0G2JS52 829 aa13.2□□□□□ -0.3
BRPF1-207ENST00000469066 IL2RBP14784 551 aa13.2□□□□□ -0.3
BRPF1-207ENST00000469066 MYT1Q01538 1121 aa13.2□□□□□ -0.3
BRPF1-207ENST00000469066 PTF1AQ7RTS3 328 aa13.2□□□□□ -0.3
BRPF1-207ENST00000469066 POLR3GLQ9BT43 218 aa13.2□□□□□ -0.3
BRPF1-207ENST00000469066 TRIM37O94972 964 aa13.19□□□□□ -0.3
BRPF1-207ENST00000469066 LTV1Q96GA3 475 aaPredicted RBP13.18□□□□□ -0.3
BRPF1-207ENST00000469066 PARP4Q9UKK3 1724 aaKnown RBP13.18□□□□□ -0.3
BRPF1-207ENST00000469066 NSD2O96028 1365 aa13.18□□□□□ -0.3
BRPF1-207ENST00000469066 FLT4P35916 1363 aa13.18□□□□□ -0.3
BRPF1-207ENST00000469066 PEAK1Q9H792 1746 aa13.17□□□□□ -0.3
BRPF1-207ENST00000469066 PLSCR1O15162 318 aa13.17□□□□□ -0.3
BRPF1-207ENST00000469066 EN1Q05925 392 aaPredicted RBP13.17□□□□□ -0.3
BRPF1-207ENST00000469066 PROM2Q8N271 834 aa13.17□□□□□ -0.3
BRPF1-207ENST00000469066 BCL11BQ9C0K0 894 aaPredicted RBP13.17□□□□□ -0.3
BRPF1-207ENST00000469066 KNSTRNQ9Y448 316 aa13.17□□□□□ -0.3
BRPF1-207ENST00000469066 NCAPD2Q15021 1401 aa13.16□□□□□ -0.3
BRPF1-207ENST00000469066 EYA1Q99502 592 aa13.16□□□□□ -0.3
BRPF1-207ENST00000469066 LTN1O94822 1766 aa13.16□□□□□ -0.3
BRPF1-207ENST00000469066 NPC1L1Q9UHC9 1359 aa13.16□□□□□ -0.3
BRPF1-207ENST00000469066 EZH2Q15910 746 aaKnown RBP13.15□□□□□ -0.3
BRPF1-207ENST00000469066 KCNQ2O43526 872 aa13.14□□□□□ -0.31
BRPF1-207ENST00000469066 APBA3O96018 575 aa13.14□□□□□ -0.31
BRPF1-207ENST00000469066 BAG6P46379 1132 aa13.14□□□□□ -0.31
BRPF1-207ENST00000469066 SF3B2Q13435 895 aaKnown RBP13.14□□□□□ -0.31
BRPF1-207ENST00000469066 EIF4A2Q14240 407 aaKnown RBP13.14□□□□□ -0.31
BRPF1-207ENST00000469066 MORC1Q86VD1 984 aa13.14□□□□□ -0.31
BRPF1-207ENST00000469066 ZCRB1Q8TBF4 217 aaKnown RBP13.14□□□□□ -0.31
BRPF1-207ENST00000469066 OVOS2A0A0G2JMS6 1433 aa13.13□□□□□ -0.31
BRPF1-207ENST00000469066 SMG6Q86US8 1419 aaKnown RBP13.13□□□□□ -0.31
BRPF1-207ENST00000469066 TNNT2P45379 298 aaPredicted RBP13.12□□□□□ -0.31
BRPF1-207ENST00000469066 USHBP1Q8N6Y0 703 aa13.12□□□□□ -0.31
BRPF1-207ENST00000469066 LRRC37A3O60309 1634 aa13.12□□□□□ -0.31
BRPF1-207ENST00000469066 TNS2Q63HR2 1409 aa13.12□□□□□ -0.31
BRPF1-207ENST00000469066 FAM208AQ9UK61 1670 aaKnown RBP13.12□□□□□ -0.31
BRPF1-207ENST00000469066 ADRA2BP18089 450 aa13.11□□□□□ -0.31
BRPF1-207ENST00000469066 IL13P35225 146 aa13.11□□□□□ -0.31
BRPF1-207ENST00000469066 NKX1-1Q15270 411 aaPredicted RBP13.11□□□□□ -0.31
BRPF1-207ENST00000469066 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.11□□□□□ -0.31
BRPF1-207ENST00000469066 KIF20BQ96Q89 1820 aa13.11□□□□□ -0.31
BRPF1-207ENST00000469066 PARD3Q8TEW0 1356 aa13.1□□□□□ -0.31
BRPF1-207ENST00000469066 MEGF6O75095 1541 aa13.1□□□□□ -0.31
BRPF1-207ENST00000469066 PPM1GO15355 546 aaPredicted RBP13.1□□□□□ -0.31
BRPF1-207ENST00000469066 CYP27B1O15528 508 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms