RNA–Protein interactions for RNA: ENST00000468876.1

ARHGEF39-202, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 2

Gene ARHGEF39, Length 739 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-202ENST00000468876 C14orf93Q9H972 538 aaKnown RBP17.17■□□□□ 0.34
ARHGEF39-202ENST00000468876 PHRF1Q9P1Y6 1649 aaKnown RBP17.16■□□□□ 0.34
ARHGEF39-202ENST00000468876 ZBTB7CA1YPR0 619 aa17.14■□□□□ 0.33
ARHGEF39-202ENST00000468876 MARCH10Q8NA82 808 aaPredicted RBP17.14■□□□□ 0.33
ARHGEF39-202ENST00000468876 PRR36Q9H6K5 1346 aa17.14■□□□□ 0.33
ARHGEF39-202ENST00000468876 EIF3AQ14152 1382 aaKnown RBP17.14■□□□□ 0.33
ARHGEF39-202ENST00000468876 CRB1P82279 1406 aa17.13■□□□□ 0.33
ARHGEF39-202ENST00000468876 LRRC37A3O60309 1634 aa17.12■□□□□ 0.33
ARHGEF39-202ENST00000468876 ZNF827Q17R98 1081 aa17.12■□□□□ 0.33
ARHGEF39-202ENST00000468876 KIF3CO14782 793 aa17.11■□□□□ 0.33
ARHGEF39-202ENST00000468876 SLC16A10Q8TF71 515 aa17.11■□□□□ 0.33
ARHGEF39-202ENST00000468876 TOM1L2Q6ZVM7 507 aa17.1■□□□□ 0.33
ARHGEF39-202ENST00000468876 PCDH10Q9P2E7 1040 aa17.1■□□□□ 0.33
ARHGEF39-202ENST00000468876 MINK1Q8N4C8 1332 aaPredicted RBP17.1■□□□□ 0.33
ARHGEF39-202ENST00000468876 ADCY9O60503 1353 aa17.1■□□□□ 0.33
ARHGEF39-202ENST00000468876 AATKQ6ZMQ8 1374 aa17.1■□□□□ 0.33
ARHGEF39-202ENST00000468876 COL5A2P05997 1499 aaPredicted RBP17.1■□□□□ 0.33
ARHGEF39-202ENST00000468876 ARHGEF28Q8N1W1 1705 aaKnown RBP17.1■□□□□ 0.33
ARHGEF39-202ENST00000468876 GOLGB1Q14789 3259 aaKnown RBP17.09■□□□□ 0.33
ARHGEF39-202ENST00000468876 WWC3Q9ULE0 1092 aa17.09■□□□□ 0.33
ARHGEF39-202ENST00000468876 TOPAZ1Q8N9V7 1692 aa17.09■□□□□ 0.33
ARHGEF39-202ENST00000468876 CPDO75976 1380 aa17.08■□□□□ 0.32
ARHGEF39-202ENST00000468876 LMO7Q8WWI1 1683 aa17.07■□□□□ 0.32
ARHGEF39-202ENST00000468876 BCL9O00512 1426 aa17.07■□□□□ 0.32
ARHGEF39-202ENST00000468876 KLRG1Q96E93 195 aa17.07■□□□□ 0.32
ARHGEF39-202ENST00000468876 KDM2AQ9Y2K7 1162 aa17.07■□□□□ 0.32
ARHGEF39-202ENST00000468876 TULP4Q9NRJ4 1543 aa17.06■□□□□ 0.32
ARHGEF39-202ENST00000468876 ABTB2Q8N961 1025 aa17.06■□□□□ 0.32
ARHGEF39-202ENST00000468876 DCAF11Q8TEB1 546 aa17.06■□□□□ 0.32
ARHGEF39-202ENST00000468876 WASLO00401 505 aaPredicted RBP17.05■□□□□ 0.32
ARHGEF39-202ENST00000468876 ACSBG1Q96GR2 724 aa17.05■□□□□ 0.32
ARHGEF39-202ENST00000468876 TRAK1Q9UPV9 953 aa17.05■□□□□ 0.32
ARHGEF39-202ENST00000468876 TOMM70O94826 608 aa17.04■□□□□ 0.32
ARHGEF39-202ENST00000468876 HTRA3P83110 453 aa17.04■□□□□ 0.32
ARHGEF39-202ENST00000468876 JMYQ8N9B5 988 aa17.04■□□□□ 0.32
ARHGEF39-202ENST00000468876 CDCA7Q9BWT1 371 aaPredicted RBP17.04■□□□□ 0.32
ARHGEF39-202ENST00000468876 EXOC5O00471 708 aa17.02■□□□□ 0.32
ARHGEF39-202ENST00000468876 GCP02774 474 aa17.02■□□□□ 0.32
ARHGEF39-202ENST00000468876 TFCP2L1Q9NZI6 479 aa17.02■□□□□ 0.32
ARHGEF39-202ENST00000468876 PAPPAQ13219 1627 aa17.02■□□□□ 0.31
ARHGEF39-202ENST00000468876 AKAP12Q02952 1782 aa17.02■□□□□ 0.31
ARHGEF39-202ENST00000468876 PNPLA7Q6ZV29 1317 aa17■□□□□ 0.31
ARHGEF39-202ENST00000468876 MSH5O43196 834 aa17■□□□□ 0.31
ARHGEF39-202ENST00000468876 LRRC4BQ9NT99 713 aa17■□□□□ 0.31
ARHGEF39-202ENST00000468876 NLRP13Q86W25 1043 aa16.99■□□□□ 0.31
ARHGEF39-202ENST00000468876 AKT1S1Q96B36 256 aa16.99■□□□□ 0.31
ARHGEF39-202ENST00000468876 NUDT16Q96DE0 195 aaKnown RBP16.99■□□□□ 0.31
ARHGEF39-202ENST00000468876 BRD4O60885 1362 aaPredicted RBP16.99■□□□□ 0.31
ARHGEF39-202ENST00000468876 KIAA1210Q9ULL0 1709 aa16.99■□□□□ 0.31
ARHGEF39-202ENST00000468876 USP19O94966 1318 aa16.98■□□□□ 0.31
ARHGEF39-202ENST00000468876 WDR90Q96KV7 1748 aa16.98■□□□□ 0.31
ARHGEF39-202ENST00000468876 CSB-PGBD3P0DP91 1061 aa16.96■□□□□ 0.31
ARHGEF39-202ENST00000468876 ITSN1Q15811 1721 aa16.96■□□□□ 0.3
ARHGEF39-202ENST00000468876 ACEP12821 1306 aa16.96■□□□□ 0.3
ARHGEF39-202ENST00000468876 WDR17Q8IZU2 1322 aa16.96■□□□□ 0.3
ARHGEF39-202ENST00000468876 MSL1Q68DK7 614 aa16.95■□□□□ 0.3
ARHGEF39-202ENST00000468876 USP6P35125 1406 aa16.95■□□□□ 0.3
ARHGEF39-202ENST00000468876 NHSQ6T4R5 1651 aa16.94■□□□□ 0.3
ARHGEF39-202ENST00000468876 HSPA1AP0DMV8 641 aaKnown RBP16.93■□□□□ 0.3
ARHGEF39-202ENST00000468876 HSPA1BP0DMV9 641 aaKnown RBP16.93■□□□□ 0.3
ARHGEF39-202ENST00000468876 C16orf71Q8IYS4 520 aaPredicted RBP16.93■□□□□ 0.3
ARHGEF39-202ENST00000468876 CD2APQ9Y5K6 639 aa16.93■□□□□ 0.3
ARHGEF39-202ENST00000468876 COL24A1Q17RW2 1714 aa16.93■□□□□ 0.3
ARHGEF39-202ENST00000468876 WNK3Q9BYP7 1800 aa16.92■□□□□ 0.3
ARHGEF39-202ENST00000468876 SLC27A3Q5K4L6 730 aa16.92■□□□□ 0.3
ARHGEF39-202ENST00000468876 NBPF1Q3BBV0 1214 aa16.91■□□□□ 0.3
ARHGEF39-202ENST00000468876 STAC3Q96MF2 364 aa16.91■□□□□ 0.3
ARHGEF39-202ENST00000468876 KCNQ4P56696 695 aa16.9■□□□□ 0.3
ARHGEF39-202ENST00000468876 RBM46Q8TBY0 533 aaKnown RBP16.9■□□□□ 0.3
ARHGEF39-202ENST00000468876 CARD10Q9BWT7 1032 aa16.9■□□□□ 0.3
ARHGEF39-202ENST00000468876 NMRK2Q9NPI5 230 aa16.9■□□□□ 0.3
ARHGEF39-202ENST00000468876 QRICH2Q9H0J4 1663 aa16.9■□□□□ 0.3
ARHGEF39-202ENST00000468876 POLR3AO14802 1390 aaPredicted RBP16.89■□□□□ 0.3
ARHGEF39-202ENST00000468876 TNS2Q63HR2 1409 aa16.89■□□□□ 0.29
ARHGEF39-202ENST00000468876 AXIN2Q9Y2T1 843 aa16.89■□□□□ 0.29
ARHGEF39-202ENST00000468876 QSER1Q2KHR3 1735 aa16.89■□□□□ 0.29
ARHGEF39-202ENST00000468876 TRPM1Q7Z4N2 1603 aa16.88■□□□□ 0.29
ARHGEF39-202ENST00000468876 BTAF1O14981 1849 aa16.87■□□□□ 0.29
ARHGEF39-202ENST00000468876 NLRP6P59044 892 aa16.87■□□□□ 0.29
ARHGEF39-202ENST00000468876 IGSF1Q8N6C5 1336 aa16.87■□□□□ 0.29
ARHGEF39-202ENST00000468876 FSTL1Q12841 308 aa16.86■□□□□ 0.29
ARHGEF39-202ENST00000468876 COL23A1Q86Y22 540 aaPredicted RBP16.86■□□□□ 0.29
ARHGEF39-202ENST00000468876 CDK19Q9BWU1 502 aa16.86■□□□□ 0.29
ARHGEF39-202ENST00000468876 CCDC61Q9Y6R9 512 aa16.85■□□□□ 0.29
ARHGEF39-202ENST00000468876 SIN3AQ96ST3 1273 aa16.84■□□□□ 0.29
ARHGEF39-202ENST00000468876 CCDC7Q96M83 1385 aa16.84■□□□□ 0.29
ARHGEF39-202ENST00000468876 PLEKHG3A1L390 1219 aa16.83■□□□□ 0.28
ARHGEF39-202ENST00000468876 FAM161AQ3B820 660 aa16.83■□□□□ 0.28
ARHGEF39-202ENST00000468876 PPIP5K1Q6PFW1 1433 aa16.83■□□□□ 0.28
ARHGEF39-202ENST00000468876 L3MBTL2Q969R5 705 aa16.83■□□□□ 0.28
ARHGEF39-202ENST00000468876 TUBGCP6Q96RT7 1819 aa16.82■□□□□ 0.28
ARHGEF39-202ENST00000468876 CENPJQ9HC77 1338 aaPredicted RBP16.81■□□□□ 0.28
ARHGEF39-202ENST00000468876 SOX12O15370 315 aa16.81■□□□□ 0.28
ARHGEF39-202ENST00000468876 SYTL4Q96C24 671 aaPredicted RBP16.8■□□□□ 0.28
ARHGEF39-202ENST00000468876 KAT6BQ8WYB5 2073 aa16.8■□□□□ 0.28
ARHGEF39-202ENST00000468876 ABCC6O95255 1503 aa16.8■□□□□ 0.28
ARHGEF39-202ENST00000468876 CPSF1Q10570 1443 aaKnown RBP16.79■□□□□ 0.28
ARHGEF39-202ENST00000468876 CCNL1Q9UK58 526 aaPredicted RBP16.78■□□□□ 0.28
ARHGEF39-202ENST00000468876 COL18A1P39060 1754 aa16.77■□□□□ 0.28
ARHGEF39-202ENST00000468876 SLIT3O75094 1523 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms