RNA–Protein interactions for RNA: ENST00000468874.2

TMEM50B-206, Transcript of transmembrane protein 50B, humanhuman

TSL 5

Gene TMEM50B, Length 724 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-206ENST00000468874 XIRP1Q702N8 1843 aaKnown RBP11.35□□□□□ -0.59
TMEM50B-206ENST00000468874 NYAP1Q6ZVC0 841 aa11.35□□□□□ -0.59
TMEM50B-206ENST00000468874 TSR3Q9UJK0 312 aaKnown RBP11.35□□□□□ -0.59
TMEM50B-206ENST00000468874 ADGRG1Q9Y653 693 aa11.35□□□□□ -0.59
TMEM50B-206ENST00000468874 ERVK-7P63135 1459 aa11.35□□□□□ -0.59
TMEM50B-206ENST00000468874 TULP1O00294 542 aaPredicted RBP11.34□□□□□ -0.59
TMEM50B-206ENST00000468874 PLA2G2EQ9NZK7 142 aa11.34□□□□□ -0.59
TMEM50B-206ENST00000468874 NCOA2Q15596 1464 aa11.33□□□□□ -0.6
TMEM50B-206ENST00000468874 MTUS2Q5JR59 1369 aa11.33□□□□□ -0.6
TMEM50B-206ENST00000468874 TMEM2Q9UHN6 1383 aa11.33□□□□□ -0.6
TMEM50B-206ENST00000468874 GNPATO15228 680 aa11.33□□□□□ -0.6
TMEM50B-206ENST00000468874 HDGFP51858 240 aaKnown RBP11.33□□□□□ -0.6
TMEM50B-206ENST00000468874 RBM46Q8TBY0 533 aaKnown RBP11.33□□□□□ -0.6
TMEM50B-206ENST00000468874 WBP1LQ9NX94 342 aa11.33□□□□□ -0.6
TMEM50B-206ENST00000468874 HPS5Q9UPZ3 1129 aa11.33□□□□□ -0.6
TMEM50B-206ENST00000468874 ABCC3O15438 1527 aa11.33□□□□□ -0.6
TMEM50B-206ENST00000468874 PRDM15P57071 1507 aaPredicted RBP11.33□□□□□ -0.6
TMEM50B-206ENST00000468874 CCDC141Q6ZP82 1450 aa11.32□□□□□ -0.6
TMEM50B-206ENST00000468874 PHLPP1O60346 1717 aa11.32□□□□□ -0.6
TMEM50B-206ENST00000468874 RBM6P78332 1123 aaKnown RBP11.32□□□□□ -0.6
TMEM50B-206ENST00000468874 GPIHBP1Q8IV16 184 aa11.32□□□□□ -0.6
TMEM50B-206ENST00000468874 UBR1Q8IWV7 1749 aa11.32□□□□□ -0.6
TMEM50B-206ENST00000468874 NKTRP30414 1462 aaKnown RBP11.32□□□□□ -0.6
TMEM50B-206ENST00000468874 LRP6O75581 1613 aa11.31□□□□□ -0.6
TMEM50B-206ENST00000468874 MAP3K1Q13233 1512 aa11.31□□□□□ -0.6
TMEM50B-206ENST00000468874 NCOA3Q9Y6Q9 1424 aa11.31□□□□□ -0.6
TMEM50B-206ENST00000468874 NUTM2BA6NNL0 878 aaPredicted RBP11.3□□□□□ -0.6
TMEM50B-206ENST00000468874 NUTM2EB1AL46 878 aaPredicted RBP11.3□□□□□ -0.6
TMEM50B-206ENST00000468874 NUTM2DQ5VT03 806 aaPredicted RBP11.3□□□□□ -0.6
TMEM50B-206ENST00000468874 NUTM2AQ8IVF1 878 aaPredicted RBP11.3□□□□□ -0.6
TMEM50B-206ENST00000468874 NGLY1Q96IV0 654 aa11.3□□□□□ -0.6
TMEM50B-206ENST00000468874 SRCAPQ6ZRS2 3230 aa11.3□□□□□ -0.6
TMEM50B-206ENST00000468874 FECHP22830 423 aa11.29□□□□□ -0.6
TMEM50B-206ENST00000468874 PPP4CP60510 307 aa11.29□□□□□ -0.6
TMEM50B-206ENST00000468874 SWT1Q5T5J6 900 aaKnown RBP11.29□□□□□ -0.6
TMEM50B-206ENST00000468874 CCDC125Q86Z20 511 aa11.29□□□□□ -0.6
TMEM50B-206ENST00000468874 SLC26A8Q96RN1 970 aa11.29□□□□□ -0.6
TMEM50B-206ENST00000468874 COL16A1Q07092 1604 aaPredicted RBP11.28□□□□□ -0.6
TMEM50B-206ENST00000468874 ARHGAP31Q2M1Z3 1444 aa11.28□□□□□ -0.6
TMEM50B-206ENST00000468874 CAMSAP2Q08AD1 1489 aa11.28□□□□□ -0.6
TMEM50B-206ENST00000468874 OATP04181 439 aa11.28□□□□□ -0.6
TMEM50B-206ENST00000468874 DNAJB2P25686 324 aa11.28□□□□□ -0.6
TMEM50B-206ENST00000468874 FAM161AQ3B820 660 aa11.28□□□□□ -0.6
TMEM50B-206ENST00000468874 IFFO2Q5TF58 517 aa11.28□□□□□ -0.6
TMEM50B-206ENST00000468874 QTRT2Q9H974 415 aaKnown RBP11.28□□□□□ -0.6
TMEM50B-206ENST00000468874 AFF2P51816 1311 aa11.28□□□□□ -0.6
TMEM50B-206ENST00000468874 ATAD2Q6PL18 1390 aa11.28□□□□□ -0.6
TMEM50B-206ENST00000468874 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.27□□□□□ -0.61
TMEM50B-206ENST00000468874 TIAM1Q13009 1591 aa11.26□□□□□ -0.61
TMEM50B-206ENST00000468874 RCCD1A6NED2 376 aa11.26□□□□□ -0.61
TMEM50B-206ENST00000468874 SLF2Q8IX21 1173 aa11.26□□□□□ -0.61
TMEM50B-206ENST00000468874 PXYLP1Q8TE99 480 aa11.26□□□□□ -0.61
TMEM50B-206ENST00000468874 C19orf44Q9H6X5 657 aa11.26□□□□□ -0.61
TMEM50B-206ENST00000468874 TET3O43151 1660 aa11.26□□□□□ -0.61
TMEM50B-206ENST00000468874 ATF3P18847 181 aa11.25□□□□□ -0.61
TMEM50B-206ENST00000468874 BCANQ96GW7 911 aa11.25□□□□□ -0.61
TMEM50B-206ENST00000468874 TMEM134Q9H6X4 195 aa11.25□□□□□ -0.61
TMEM50B-206ENST00000468874 CEP162Q5TB80 1403 aa11.25□□□□□ -0.61
TMEM50B-206ENST00000468874 SHPRHQ149N8 1683 aa11.24□□□□□ -0.61
TMEM50B-206ENST00000468874 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.24□□□□□ -0.61
TMEM50B-206ENST00000468874 ITGBL1O95965 494 aaPredicted RBP11.24□□□□□ -0.61
TMEM50B-206ENST00000468874 NECTIN2Q92692 538 aa11.24□□□□□ -0.61
TMEM50B-206ENST00000468874 RGS12O14924 1447 aa11.24□□□□□ -0.61
TMEM50B-206ENST00000468874 NWD1Q149M9 1564 aa11.24□□□□□ -0.61
TMEM50B-206ENST00000468874 AHDC1Q5TGY3 1603 aaPredicted RBP11.24□□□□□ -0.61
TMEM50B-206ENST00000468874 C14orf37Q86TY3 774 aa11.23□□□□□ -0.61
TMEM50B-206ENST00000468874 METTL3Q86U44 580 aaKnown RBP11.23□□□□□ -0.61
TMEM50B-206ENST00000468874 LRRC59Q96AG4 307 aaKnown RBP11.23□□□□□ -0.61
TMEM50B-206ENST00000468874 KDM5AP29375 1690 aaKnown RBP11.22□□□□□ -0.61
TMEM50B-206ENST00000468874 SLC4A3P48751 1232 aa11.22□□□□□ -0.61
TMEM50B-206ENST00000468874 IDI1Q13907 227 aa11.22□□□□□ -0.61
TMEM50B-206ENST00000468874 EFCAB6Q5THR3 1501 aa11.22□□□□□ -0.61
TMEM50B-206ENST00000468874 EIF2AK4Q9P2K8 1649 aaKnown RBP11.22□□□□□ -0.61
TMEM50B-206ENST00000468874 ARHGEF5Q12774 1597 aa11.21□□□□□ -0.61
TMEM50B-206ENST00000468874 RNF40O75150 1001 aa11.21□□□□□ -0.61
TMEM50B-206ENST00000468874 C8orf37Q96NL8 207 aa11.21□□□□□ -0.61
TMEM50B-206ENST00000468874 SLC52A1Q9NWF4 448 aa11.21□□□□□ -0.61
TMEM50B-206ENST00000468874 TBX22Q9Y458 520 aa11.21□□□□□ -0.61
TMEM50B-206ENST00000468874 EHBP1L1Q8N3D4 1523 aa11.19□□□□□ -0.62
TMEM50B-206ENST00000468874 SETD5Q9C0A6 1442 aa11.19□□□□□ -0.62
TMEM50B-206ENST00000468874 LMOD2Q6P5Q4 547 aa11.19□□□□□ -0.62
TMEM50B-206ENST00000468874 BRINP3Q76B58 766 aa11.19□□□□□ -0.62
TMEM50B-206ENST00000468874 PIK3C2BO00750 1634 aa11.18□□□□□ -0.62
TMEM50B-206ENST00000468874 APLP1P51693 650 aa11.18□□□□□ -0.62
TMEM50B-206ENST00000468874 TRPC5Q9UL62 973 aaPredicted RBP11.18□□□□□ -0.62
TMEM50B-206ENST00000468874 SETBP1Q9Y6X0 1596 aa11.18□□□□□ -0.62
TMEM50B-206ENST00000468874 KANK1Q14678 1352 aa11.17□□□□□ -0.62
TMEM50B-206ENST00000468874 PLEKHG1Q9ULL1 1385 aa11.17□□□□□ -0.62
TMEM50B-206ENST00000468874 SLC24A1O60721 1099 aa11.17□□□□□ -0.62
TMEM50B-206ENST00000468874 MAP2K5Q13163 448 aa11.17□□□□□ -0.62
TMEM50B-206ENST00000468874 MROH1Q8NDA8 1641 aa11.17□□□□□ -0.62
TMEM50B-206ENST00000468874 MAST1Q9Y2H9 1570 aa11.16□□□□□ -0.62
TMEM50B-206ENST00000468874 DIP2AQ14689 1571 aa11.16□□□□□ -0.62
TMEM50B-206ENST00000468874 PIK3R4Q99570 1358 aa11.16□□□□□ -0.62
TMEM50B-206ENST00000468874 DUOX2Q9NRD8 1548 aa11.15□□□□□ -0.62
TMEM50B-206ENST00000468874 PPP1R15AO75807 674 aaPredicted RBP11.15□□□□□ -0.62
TMEM50B-206ENST00000468874 KCNC4Q03721 635 aa11.15□□□□□ -0.62
TMEM50B-206ENST00000468874 TJAP1Q5JTD0 557 aa11.15□□□□□ -0.62
TMEM50B-206ENST00000468874 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.15□□□□□ -0.62
TMEM50B-206ENST00000468874 USP21Q9UK80 565 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms