RNA–Protein interactions for RNA: ENST00000468528.5

NXF3-204, Transcript of nuclear RNA export factor 3, humanhuman

TSL 5

Gene NXF3, Length 535 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-204ENST00000468528 EMILIN1Q9Y6C2 1016 aa9.58□□□□□ -0.88
NXF3-204ENST00000468528 MARF1Q9Y4F3 1742 aaKnown RBP9.58□□□□□ -0.88
NXF3-204ENST00000468528 CRYBG1Q9Y4K1 1723 aa9.57□□□□□ -0.88
NXF3-204ENST00000468528 HOXC9P31274 260 aa9.57□□□□□ -0.88
NXF3-204ENST00000468528 ZC3H6P61129 1189 aaKnown RBP9.57□□□□□ -0.88
NXF3-204ENST00000468528 PNNQ9H307 717 aaKnown RBP9.57□□□□□ -0.88
NXF3-204ENST00000468528 KIAA0232Q92628 1395 aa9.57□□□□□ -0.88
NXF3-204ENST00000468528 WDR43Q15061 677 aaKnown RBP eCLIP9.56□□□□□ -0.88
NXF3-204ENST00000468528 PNISRQ8TF01 805 aaKnown RBP9.56□□□□□ -0.88
NXF3-204ENST00000468528 PLEKHG2Q9H7P9 1386 aa9.55□□□□□ -0.88
NXF3-204ENST00000468528 MAP2P11137 1827 aaKnown RBP9.55□□□□□ -0.88
NXF3-204ENST00000468528 FBLN1P23142 703 aa9.55□□□□□ -0.88
NXF3-204ENST00000468528 HSP90AB2PQ58FF8 381 aa9.55□□□□□ -0.88
NXF3-204ENST00000468528 COL3A1P02461 1466 aaPredicted RBP9.54□□□□□ -0.88
NXF3-204ENST00000468528 ABCA3Q99758 1704 aa9.54□□□□□ -0.88
NXF3-204ENST00000468528 IL13P35225 146 aa9.54□□□□□ -0.88
NXF3-204ENST00000468528 ERBB3P21860 1342 aa9.54□□□□□ -0.88
NXF3-204ENST00000468528 LTN1O94822 1766 aa9.53□□□□□ -0.88
NXF3-204ENST00000468528 COL14A1Q05707 1796 aaKnown RBP9.53□□□□□ -0.88
NXF3-204ENST00000468528 ZBTB7CA1YPR0 619 aa9.53□□□□□ -0.88
NXF3-204ENST00000468528 FAM83GA6ND36 823 aa9.53□□□□□ -0.88
NXF3-204ENST00000468528 NUTM2BA6NNL0 878 aaPredicted RBP9.53□□□□□ -0.88
NXF3-204ENST00000468528 NUTM2EB1AL46 878 aaPredicted RBP9.53□□□□□ -0.88
NXF3-204ENST00000468528 PLEKHG5O94827 1062 aa9.53□□□□□ -0.88
NXF3-204ENST00000468528 FCHSD2O94868 740 aa9.53□□□□□ -0.88
NXF3-204ENST00000468528 NEFMP07197 916 aa9.53□□□□□ -0.88
NXF3-204ENST00000468528 EIF4A2Q14240 407 aaKnown RBP9.53□□□□□ -0.88
NXF3-204ENST00000468528 NUTM2AQ8IVF1 878 aaPredicted RBP9.53□□□□□ -0.88
NXF3-204ENST00000468528 ANKRD24Q8TF21 1146 aa9.53□□□□□ -0.88
NXF3-204ENST00000468528 U2SURPO15042 1029 aaKnown RBP9.52□□□□□ -0.89
NXF3-204ENST00000468528 ADAMTS2O95450 1211 aa9.52□□□□□ -0.89
NXF3-204ENST00000468528 U2AF1L5P0DN76 240 aaPredicted RBP9.52□□□□□ -0.89
NXF3-204ENST00000468528 EVA1CP58658 441 aa9.52□□□□□ -0.89
NXF3-204ENST00000468528 U2AF1Q01081 240 aaKnown RBP eCLIP9.52□□□□□ -0.89
NXF3-204ENST00000468528 CHRNA2Q15822 529 aa9.52□□□□□ -0.89
NXF3-204ENST00000468528 FNBP4Q8N3X1 1017 aaPredicted RBP9.52□□□□□ -0.89
NXF3-204ENST00000468528 NGEFQ8N5V2 710 aa9.52□□□□□ -0.89
NXF3-204ENST00000468528 NGLY1Q96IV0 654 aa9.52□□□□□ -0.89
NXF3-204ENST00000468528 WDR17Q8IZU2 1322 aa9.52□□□□□ -0.89
NXF3-204ENST00000468528 IGSF1Q8N6C5 1336 aa9.52□□□□□ -0.89
NXF3-204ENST00000468528 KDRP35968 1356 aa9.51□□□□□ -0.89
NXF3-204ENST00000468528 PEAK1Q9H792 1746 aa9.51□□□□□ -0.89
NXF3-204ENST00000468528 CSB-PGBD3P0DP91 1061 aa9.51□□□□□ -0.89
NXF3-204ENST00000468528 CCDC184Q52MB2 194 aa9.51□□□□□ -0.89
NXF3-204ENST00000468528 MEX3CQ5U5Q3 659 aaKnown RBP9.51□□□□□ -0.89
NXF3-204ENST00000468528 BTG4Q9NY30 223 aa9.51□□□□□ -0.89
NXF3-204ENST00000468528 AXIN2Q9Y2T1 843 aa9.51□□□□□ -0.89
NXF3-204ENST00000468528 COL5A2P05997 1499 aaPredicted RBP9.51□□□□□ -0.89
NXF3-204ENST00000468528 LMO7Q8WWI1 1683 aa9.51□□□□□ -0.89
NXF3-204ENST00000468528 SLIT2O94813 1529 aa9.51□□□□□ -0.89
NXF3-204ENST00000468528 COL18A1P39060 1754 aa9.5□□□□□ -0.89
NXF3-204ENST00000468528 EYA1Q99502 592 aa9.5□□□□□ -0.89
NXF3-204ENST00000468528 CARD10Q9BWT7 1032 aa9.5□□□□□ -0.89
NXF3-204ENST00000468528 ADAMTS8Q9UP79 889 aa9.5□□□□□ -0.89
NXF3-204ENST00000468528 FAM208AQ9UK61 1670 aaKnown RBP9.5□□□□□ -0.89
NXF3-204ENST00000468528 CAMTA1Q9Y6Y1 1673 aa9.5□□□□□ -0.89
NXF3-204ENST00000468528 CRB1P82279 1406 aa9.49□□□□□ -0.89
NXF3-204ENST00000468528 NCAPD2Q15021 1401 aa9.49□□□□□ -0.89
NXF3-204ENST00000468528 NWD2Q9ULI1 1742 aa9.49□□□□□ -0.89
NXF3-204ENST00000468528 TOM1L2Q6ZVM7 507 aa9.49□□□□□ -0.89
NXF3-204ENST00000468528 UNC5CLQ8IV45 518 aa9.49□□□□□ -0.89
NXF3-204ENST00000468528 FAM9BQ8IZU0 186 aa9.49□□□□□ -0.89
NXF3-204ENST00000468528 LTV1Q96GA3 475 aaPredicted RBP9.49□□□□□ -0.89
NXF3-204ENST00000468528 CDCA7Q9BWT1 371 aaPredicted RBP9.49□□□□□ -0.89
NXF3-204ENST00000468528 NLRP2Q9NX02 1062 aa9.49□□□□□ -0.89
NXF3-204ENST00000468528 THRAP3Q9Y2W1 955 aaKnown RBP9.49□□□□□ -0.89
NXF3-204ENST00000468528 NBPF6Q5VWK0 638 aa9.48□□□□□ -0.89
NXF3-204ENST00000468528 SULT6B1Q6IMI4 303 aa9.48□□□□□ -0.89
NXF3-204ENST00000468528 RUNDC1Q96C34 613 aa9.48□□□□□ -0.89
NXF3-204ENST00000468528 NBPF4Q96M43 638 aa9.48□□□□□ -0.89
NXF3-204ENST00000468528 C8orf37Q96NL8 207 aa9.48□□□□□ -0.89
NXF3-204ENST00000468528 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.48□□□□□ -0.89
NXF3-204ENST00000468528 MAPK8IP3Q9UPT6 1336 aa9.48□□□□□ -0.89
NXF3-204ENST00000468528 LRP6O75581 1613 aa9.48□□□□□ -0.89
NXF3-204ENST00000468528 VPS72Q15906 364 aa9.47□□□□□ -0.89
NXF3-204ENST00000468528 AMOTQ4VCS5 1084 aa9.47□□□□□ -0.89
NXF3-204ENST00000468528 ZNF772Q68DY9 489 aaPredicted RBP9.47□□□□□ -0.89
NXF3-204ENST00000468528 RAPGEF4Q8WZA2 1011 aa9.47□□□□□ -0.89
NXF3-204ENST00000468528 RSPH6AQ9H0K4 717 aa9.47□□□□□ -0.89
NXF3-204ENST00000468528 USP21Q9UK80 565 aa9.47□□□□□ -0.89
NXF3-204ENST00000468528 RGPD1P0DJD0 1748 aa9.47□□□□□ -0.89
NXF3-204ENST00000468528 PRKAR2BP31323 418 aa9.46□□□□□ -0.9
NXF3-204ENST00000468528 LARP1Q6PKG0 1096 aaKnown RBP9.46□□□□□ -0.9
NXF3-204ENST00000468528 TCP11L2Q8N4U5 519 aa9.46□□□□□ -0.9
NXF3-204ENST00000468528 STRN4Q9NRL3 753 aa9.46□□□□□ -0.9
NXF3-204ENST00000468528 BCL9LQ86UU0 1499 aa9.46□□□□□ -0.9
NXF3-204ENST00000468528 PLCH1Q4KWH8 1693 aa9.45□□□□□ -0.9
NXF3-204ENST00000468528 HMOX1P09601 288 aa9.45□□□□□ -0.9
NXF3-204ENST00000468528 TATP17735 454 aaPredicted RBP9.45□□□□□ -0.9
NXF3-204ENST00000468528 PLEKHO1Q53GL0 409 aaPredicted RBP9.45□□□□□ -0.9
NXF3-204ENST00000468528 BARGINQ6ZT62 677 aa9.45□□□□□ -0.9
NXF3-204ENST00000468528 GAS2L2Q8NHY3 880 aa9.45□□□□□ -0.9
NXF3-204ENST00000468528 PLEKHF1Q96S99 279 aa9.45□□□□□ -0.9
NXF3-204ENST00000468528 TRPC5Q9UL62 973 aaPredicted RBP9.45□□□□□ -0.9
NXF3-204ENST00000468528 AFF2P51816 1311 aa9.45□□□□□ -0.9
NXF3-204ENST00000468528 SPATA31A1Q5TZJ5 1347 aa9.45□□□□□ -0.9
NXF3-204ENST00000468528 SPATA31A5Q5VU36 1347 aa9.45□□□□□ -0.9
NXF3-204ENST00000468528 SPATA31A7Q8IWB4 1347 aa9.45□□□□□ -0.9
NXF3-204ENST00000468528 IL2RBP14784 551 aa9.44□□□□□ -0.9
NXF3-204ENST00000468528 LMOD3Q0VAK6 560 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms