RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 SOX12O15370 315 aa23.97■■□□□ 1.43
SSBP1-207ENST00000468267 BLMP54132 1417 aaPredicted RBP23.97■■□□□ 1.43
SSBP1-207ENST00000468267 NFAT5O94916 1531 aa23.96■■□□□ 1.43
SSBP1-207ENST00000468267 TCP11L2Q8N4U5 519 aa23.96■■□□□ 1.43
SSBP1-207ENST00000468267 AXIN2Q9Y2T1 843 aa23.96■■□□□ 1.43
SSBP1-207ENST00000468267 RGPD5Q99666 1765 aa23.94■■□□□ 1.42
SSBP1-207ENST00000468267 THRAP3Q9Y2W1 955 aaKnown RBP23.94■■□□□ 1.42
SSBP1-207ENST00000468267 CRB1P82279 1406 aa23.93■■□□□ 1.42
SSBP1-207ENST00000468267 CDCA8Q53HL2 280 aa23.92■■□□□ 1.42
SSBP1-207ENST00000468267 FAM182BQ5T319 152 aa23.91■■□□□ 1.42
SSBP1-207ENST00000468267 ANKRD36BQ8N2N9 1353 aa23.91■■□□□ 1.42
SSBP1-207ENST00000468267 SF3B2Q13435 895 aaKnown RBP23.9■■□□□ 1.42
SSBP1-207ENST00000468267 WDR17Q8IZU2 1322 aa23.89■■□□□ 1.42
SSBP1-207ENST00000468267 TOM1L2Q6ZVM7 507 aa23.89■■□□□ 1.41
SSBP1-207ENST00000468267 ABCC6O95255 1503 aa23.89■■□□□ 1.41
SSBP1-207ENST00000468267 OVOS2A0A0J9YW53 1432 aa23.88■■□□□ 1.41
SSBP1-207ENST00000468267 OVOS2Q6IE36 1432 aa23.88■■□□□ 1.41
SSBP1-207ENST00000468267 LTN1O94822 1766 aa23.87■■□□□ 1.41
SSBP1-207ENST00000468267 PDE3BQ13370 1112 aa23.86■■□□□ 1.41
SSBP1-207ENST00000468267 DEFB132Q7Z7B7 95 aa23.86■■□□□ 1.41
SSBP1-207ENST00000468267 PARP4Q9UKK3 1724 aaKnown RBP23.85■■□□□ 1.41
SSBP1-207ENST00000468267 FAM196AQ6ZSG2 479 aa23.85■■□□□ 1.41
SSBP1-207ENST00000468267 SRCAPQ6ZRS2 3230 aa23.84■■□□□ 1.41
SSBP1-207ENST00000468267 RGPD1P0DJD0 1748 aa23.84■■□□□ 1.41
SSBP1-207ENST00000468267 CSB-PGBD3P0DP91 1061 aa23.83■■□□□ 1.41
SSBP1-207ENST00000468267 COG3Q96JB2 828 aa23.83■■□□□ 1.41
SSBP1-207ENST00000468267 CARD10Q9BWT7 1032 aa23.83■■□□□ 1.41
SSBP1-207ENST00000468267 EIF4G2P78344 907 aaKnown RBP eCLIP23.81■■□□□ 1.4
SSBP1-207ENST00000468267 MYOM1P52179 1685 aa23.8■■□□□ 1.4
SSBP1-207ENST00000468267 WNK3Q9BYP7 1800 aa23.8■■□□□ 1.4
SSBP1-207ENST00000468267 BAG6P46379 1132 aa23.8■■□□□ 1.4
SSBP1-207ENST00000468267 CDCA7Q9BWT1 371 aaPredicted RBP23.8■■□□□ 1.4
SSBP1-207ENST00000468267 FYB1O15117 783 aa23.79■■□□□ 1.4
SSBP1-207ENST00000468267 HSPA5P11021 654 aaKnown RBP23.78■■□□□ 1.4
SSBP1-207ENST00000468267 TNS1Q9HBL0 1735 aaKnown RBP23.78■■□□□ 1.4
SSBP1-207ENST00000468267 ERBB3P21860 1342 aa23.78■■□□□ 1.4
SSBP1-207ENST00000468267 TRIM37O94972 964 aa23.77■■□□□ 1.4
SSBP1-207ENST00000468267 DDB1Q16531 1140 aa23.77■■□□□ 1.4
SSBP1-207ENST00000468267 IP6K1Q92551 441 aa23.77■■□□□ 1.4
SSBP1-207ENST00000468267 CCDC7Q96M83 1385 aa23.77■■□□□ 1.4
SSBP1-207ENST00000468267 ANKRD24Q8TF21 1146 aa23.76■■□□□ 1.39
SSBP1-207ENST00000468267 CARD14Q9BXL6 1004 aa23.76■■□□□ 1.39
SSBP1-207ENST00000468267 LRRC37A3O60309 1634 aa23.76■■□□□ 1.39
SSBP1-207ENST00000468267 GGNBP2Q9H3C7 697 aa23.75■■□□□ 1.39
SSBP1-207ENST00000468267 DISP2A7MBM2 1401 aa23.75■■□□□ 1.39
SSBP1-207ENST00000468267 C11orf95C9JLR9 678 aaPredicted RBP23.74■■□□□ 1.39
SSBP1-207ENST00000468267 FBLN1P23142 703 aa23.74■■□□□ 1.39
SSBP1-207ENST00000468267 EN1Q05925 392 aaPredicted RBP23.74■■□□□ 1.39
SSBP1-207ENST00000468267 NLRP2Q9NX02 1062 aa23.74■■□□□ 1.39
SSBP1-207ENST00000468267 KIF20BQ96Q89 1820 aa23.74■■□□□ 1.39
SSBP1-207ENST00000468267 MAP3K19Q56UN5 1328 aa23.73■■□□□ 1.39
SSBP1-207ENST00000468267 PEAK1Q9H792 1746 aa23.73■■□□□ 1.39
SSBP1-207ENST00000468267 OVOS2A0A0G2JMS6 1433 aa23.71■■□□□ 1.39
SSBP1-207ENST00000468267 NSD3Q9BZ95 1437 aa23.7■■□□□ 1.38
SSBP1-207ENST00000468267 EXOC5O00471 708 aa23.7■■□□□ 1.38
SSBP1-207ENST00000468267 APBA3O96018 575 aa23.7■■□□□ 1.38
SSBP1-207ENST00000468267 HOXC9P31274 260 aa23.7■■□□□ 1.38
SSBP1-207ENST00000468267 AMPHP49418 695 aa23.7■■□□□ 1.38
SSBP1-207ENST00000468267 POLR3GLQ9BT43 218 aa23.7■■□□□ 1.38
SSBP1-207ENST00000468267 SBF2Q86WG5 1849 aa23.7■■□□□ 1.38
SSBP1-207ENST00000468267 MARCH10Q8NA82 808 aaPredicted RBP23.69■■□□□ 1.38
SSBP1-207ENST00000468267 CAMKK2Q96RR4 588 aa23.68■■□□□ 1.38
SSBP1-207ENST00000468267 FAM208AQ9UK61 1670 aaKnown RBP23.67■■□□□ 1.38
SSBP1-207ENST00000468267 RRS1Q15050 365 aaKnown RBP23.67■■□□□ 1.38
SSBP1-207ENST00000468267 EZH2Q15910 746 aaKnown RBP23.67■■□□□ 1.38
SSBP1-207ENST00000468267 LTV1Q96GA3 475 aaPredicted RBP23.67■■□□□ 1.38
SSBP1-207ENST00000468267 IL2RBP14784 551 aa23.66■■□□□ 1.38
SSBP1-207ENST00000468267 RTL1A6NKG5 1358 aa23.65■■□□□ 1.38
SSBP1-207ENST00000468267 BCL9O00512 1426 aa23.65■■□□□ 1.38
SSBP1-207ENST00000468267 TNS2Q63HR2 1409 aa23.64■■□□□ 1.37
SSBP1-207ENST00000468267 PARD3Q8TEW0 1356 aa23.64■■□□□ 1.37
SSBP1-207ENST00000468267 CGNL1Q0VF96 1302 aa23.63■■□□□ 1.37
SSBP1-207ENST00000468267 RGPD2P0DJD1 1756 aa23.62■■□□□ 1.37
SSBP1-207ENST00000468267 BCL11BQ9C0K0 894 aaPredicted RBP23.61■■□□□ 1.37
SSBP1-207ENST00000468267 KIF24Q5T7B8 1368 aa23.6■■□□□ 1.37
SSBP1-207ENST00000468267 PANK3Q9H999 370 aa23.59■■□□□ 1.37
SSBP1-207ENST00000468267 KAT6BQ8WYB5 2073 aa23.59■■□□□ 1.37
SSBP1-207ENST00000468267 RREB1Q92766 1687 aa23.58■■□□□ 1.37
SSBP1-207ENST00000468267 HSP90AB2PQ58FF8 381 aa23.58■■□□□ 1.37
SSBP1-207ENST00000468267 PTF1AQ7RTS3 328 aa23.58■■□□□ 1.37
SSBP1-207ENST00000468267 MAP2P11137 1827 aaKnown RBP23.57■■□□□ 1.36
SSBP1-207ENST00000468267 INSRP06213 1382 aa23.57■■□□□ 1.36
SSBP1-207ENST00000468267 FLT4P35916 1363 aa23.57■■□□□ 1.36
SSBP1-207ENST00000468267 PSDA5PKW4 1024 aaPredicted RBP23.57■■□□□ 1.36
SSBP1-207ENST00000468267 PLSCR1O15162 318 aa23.56■■□□□ 1.36
SSBP1-207ENST00000468267 NBPF6Q5VWK0 638 aa23.56■■□□□ 1.36
SSBP1-207ENST00000468267 NBPF4Q96M43 638 aa23.56■■□□□ 1.36
SSBP1-207ENST00000468267 EMILIN1Q9Y6C2 1016 aa23.55■■□□□ 1.36
SSBP1-207ENST00000468267 SMG6Q86US8 1419 aaKnown RBP23.55■■□□□ 1.36
SSBP1-207ENST00000468267 RGPD3A6NKT7 1758 aaPredicted RBP23.55■■□□□ 1.36
SSBP1-207ENST00000468267 RGPD4Q7Z3J3 1758 aa23.55■■□□□ 1.36
SSBP1-207ENST00000468267 NUP188Q5SRE5 1749 aa23.54■■□□□ 1.36
SSBP1-207ENST00000468267 ANKRD26Q9UPS8 1709 aa23.54■■□□□ 1.36
SSBP1-207ENST00000468267 R3HDM1Q15032 1099 aaKnown RBP23.53■■□□□ 1.36
SSBP1-207ENST00000468267 KCNQ2O43526 872 aa23.51■■□□□ 1.35
SSBP1-207ENST00000468267 PPM1GO15355 546 aaPredicted RBP23.5■■□□□ 1.35
SSBP1-207ENST00000468267 USHBP1Q8N6Y0 703 aa23.5■■□□□ 1.35
SSBP1-207ENST00000468267 DDX54Q8TDD1 881 aaKnown RBP23.5■■□□□ 1.35
SSBP1-207ENST00000468267 POLKQ9UBT6 870 aa23.5■■□□□ 1.35
SSBP1-207ENST00000468267 KIF7Q2M1P5 1343 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms