RNA–Protein interactions for RNA: ENST00000467931.1

COL1A2-204, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 2

Gene COL1A2, Length 713 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-204ENST00000467931 MON2Q7Z3U7 1717 aa27.05■■□□□ 1.92
COL1A2-204ENST00000467931 ZNF692Q9BU19 519 aaPredicted RBP27.05■■□□□ 1.92
COL1A2-204ENST00000467931 DDB1Q16531 1140 aa27.03■■□□□ 1.92
COL1A2-204ENST00000467931 NBPF14Q5TI25 921 aa27.03■■□□□ 1.92
COL1A2-204ENST00000467931 KTN1Q86UP2 1357 aaKnown RBP27.02■■□□□ 1.92
COL1A2-204ENST00000467931 TTC21AQ8NDW8 1320 aa27.02■■□□□ 1.92
COL1A2-204ENST00000467931 C11orf95C9JLR9 678 aaPredicted RBP27.02■■□□□ 1.92
COL1A2-204ENST00000467931 KCNH5Q8NCM2 988 aa27.02■■□□□ 1.92
COL1A2-204ENST00000467931 WDR17Q8IZU2 1322 aa27.01■■□□□ 1.91
COL1A2-204ENST00000467931 CSB-PGBD3P0DP91 1061 aa27.01■■□□□ 1.91
COL1A2-204ENST00000467931 AXIN2Q9Y2T1 843 aa27.01■■□□□ 1.91
COL1A2-204ENST00000467931 RGPD3A6NKT7 1758 aaPredicted RBP27■■□□□ 1.91
COL1A2-204ENST00000467931 RGPD4Q7Z3J3 1758 aa27■■□□□ 1.91
COL1A2-204ENST00000467931 ARHGEF25Q86VW2 580 aa26.98■■□□□ 1.91
COL1A2-204ENST00000467931 NFAT5O94916 1531 aa26.98■■□□□ 1.91
COL1A2-204ENST00000467931 LTN1O94822 1766 aa26.97■■□□□ 1.91
COL1A2-204ENST00000467931 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.95■■□□□ 1.9
COL1A2-204ENST00000467931 CARD11Q9BXL7 1154 aa26.95■■□□□ 1.9
COL1A2-204ENST00000467931 CDCA7Q9BWT1 371 aaPredicted RBP26.93■■□□□ 1.9
COL1A2-204ENST00000467931 USP54Q70EL1 1684 aa26.92■■□□□ 1.9
COL1A2-204ENST00000467931 TMC1Q8TDI8 760 aa26.92■■□□□ 1.9
COL1A2-204ENST00000467931 SBNO2Q9Y2G9 1366 aa26.92■■□□□ 1.9
COL1A2-204ENST00000467931 ABCC6O95255 1503 aa26.91■■□□□ 1.9
COL1A2-204ENST00000467931 CARD10Q9BWT7 1032 aa26.91■■□□□ 1.9
COL1A2-204ENST00000467931 TONSLQ96HA7 1378 aa26.91■■□□□ 1.9
COL1A2-204ENST00000467931 MARCH10Q8NA82 808 aaPredicted RBP26.9■■□□□ 1.9
COL1A2-204ENST00000467931 BCL11BQ9C0K0 894 aaPredicted RBP26.89■■□□□ 1.9
COL1A2-204ENST00000467931 CCDC7Q96M83 1385 aa26.87■■□□□ 1.89
COL1A2-204ENST00000467931 PLSCR1O15162 318 aa26.87■■□□□ 1.89
COL1A2-204ENST00000467931 HDGFL2Q7Z4V5 671 aaPredicted RBP26.87■■□□□ 1.89
COL1A2-204ENST00000467931 PPP1R1BQ9UD71 204 aaPredicted RBP26.87■■□□□ 1.89
COL1A2-204ENST00000467931 EXOC5O00471 708 aa26.86■■□□□ 1.89
COL1A2-204ENST00000467931 PTF1AQ7RTS3 328 aa26.86■■□□□ 1.89
COL1A2-204ENST00000467931 NME9Q86XW9 330 aa26.86■■□□□ 1.89
COL1A2-204ENST00000467931 KAT6BQ8WYB5 2073 aa26.86■■□□□ 1.89
COL1A2-204ENST00000467931 CD163L1Q9NR16 1453 aa26.86■■□□□ 1.89
COL1A2-204ENST00000467931 SPON1Q9HCB6 807 aa26.85■■□□□ 1.89
COL1A2-204ENST00000467931 TNS2Q63HR2 1409 aa26.84■■□□□ 1.89
COL1A2-204ENST00000467931 USP31Q70CQ4 1352 aa26.84■■□□□ 1.89
COL1A2-204ENST00000467931 BCL9O00512 1426 aa26.82■■□□□ 1.88
COL1A2-204ENST00000467931 KCNQ2O43526 872 aa26.82■■□□□ 1.88
COL1A2-204ENST00000467931 SLC12A5Q9H2X9 1139 aa26.82■■□□□ 1.88
COL1A2-204ENST00000467931 NLRP2Q9NX02 1062 aa26.82■■□□□ 1.88
COL1A2-204ENST00000467931 EDC4Q6P2E9 1401 aaKnown RBP26.82■■□□□ 1.88
COL1A2-204ENST00000467931 CASZ1Q86V15 1759 aa26.81■■□□□ 1.88
COL1A2-204ENST00000467931 ANO8Q9HCE9 1232 aaPredicted RBP26.81■■□□□ 1.88
COL1A2-204ENST00000467931 NHSQ6T4R5 1651 aa26.81■■□□□ 1.88
COL1A2-204ENST00000467931 TERF2IPQ9NYB0 399 aa26.8■■□□□ 1.88
COL1A2-204ENST00000467931 ERBB3P21860 1342 aa26.79■■□□□ 1.88
COL1A2-204ENST00000467931 A0A1W2PP64 1363 aa26.79■■□□□ 1.88
COL1A2-204ENST00000467931 ANKRD24Q8TF21 1146 aa26.76■■□□□ 1.87
COL1A2-204ENST00000467931 FAM208AQ9UK61 1670 aaKnown RBP26.75■■□□□ 1.87
COL1A2-204ENST00000467931 BTAF1O14981 1849 aa26.74■■□□□ 1.87
COL1A2-204ENST00000467931 TXNRD1Q16881 649 aa26.74■■□□□ 1.87
COL1A2-204ENST00000467931 PROM2Q8N271 834 aa26.74■■□□□ 1.87
COL1A2-204ENST00000467931 ACSBG1Q96GR2 724 aa26.74■■□□□ 1.87
COL1A2-204ENST00000467931 IL2RBP14784 551 aa26.73■■□□□ 1.87
COL1A2-204ENST00000467931 STK32BQ9NY57 414 aa26.73■■□□□ 1.87
COL1A2-204ENST00000467931 NINLQ9Y2I6 1382 aa26.71■■□□□ 1.87
COL1A2-204ENST00000467931 DCAF8L1A6NGE4 600 aa26.71■■□□□ 1.87
COL1A2-204ENST00000467931 MYOM1P52179 1685 aa26.7■■□□□ 1.87
COL1A2-204ENST00000467931 ZBTB7AO95365 584 aa26.7■■□□□ 1.86
COL1A2-204ENST00000467931 PUS7Q96PZ0 661 aaKnown RBP26.69■■□□□ 1.86
COL1A2-204ENST00000467931 PDGFDQ9GZP0 370 aaPredicted RBP26.69■■□□□ 1.86
COL1A2-204ENST00000467931 ST20-MTHFSA0A0A6YYL1 179 aa26.68■■□□□ 1.86
COL1A2-204ENST00000467931 LTV1Q96GA3 475 aaPredicted RBP26.68■■□□□ 1.86
COL1A2-204ENST00000467931 RGPD2P0DJD1 1756 aa26.68■■□□□ 1.86
COL1A2-204ENST00000467931 SLC15A2Q16348 729 aa26.66■■□□□ 1.86
COL1A2-204ENST00000467931 YY1P25490 414 aa26.65■■□□□ 1.86
COL1A2-204ENST00000467931 COG3Q96JB2 828 aa26.65■■□□□ 1.86
COL1A2-204ENST00000467931 ATF5Q9Y2D1 282 aaPredicted RBP26.65■■□□□ 1.86
COL1A2-204ENST00000467931 IP6K1Q92551 441 aa26.64■■□□□ 1.86
COL1A2-204ENST00000467931 TESK2Q96S53 571 aa26.64■■□□□ 1.86
COL1A2-204ENST00000467931 PAPPAQ13219 1627 aa26.61■■□□□ 1.85
COL1A2-204ENST00000467931 SLC24A1O60721 1099 aa26.61■■□□□ 1.85
COL1A2-204ENST00000467931 DDX54Q8TDD1 881 aaKnown RBP26.61■■□□□ 1.85
COL1A2-204ENST00000467931 DOT1LQ8TEK3 1739 aa26.6■■□□□ 1.85
COL1A2-204ENST00000467931 AMPHP49418 695 aa26.6■■□□□ 1.85
COL1A2-204ENST00000467931 KIF20BQ96Q89 1820 aa26.59■■□□□ 1.85
COL1A2-204ENST00000467931 MAP3K19Q56UN5 1328 aa26.59■■□□□ 1.85
COL1A2-204ENST00000467931 ANKRD36BQ8N2N9 1353 aa26.58■■□□□ 1.84
COL1A2-204ENST00000467931 HOXC9P31274 260 aa26.57■■□□□ 1.84
COL1A2-204ENST00000467931 PTGER2P43116 358 aa26.57■■□□□ 1.84
COL1A2-204ENST00000467931 SHANK3Q9BYB0 1731 aa26.56■■□□□ 1.84
COL1A2-204ENST00000467931 FBLN1P23142 703 aa26.56■■□□□ 1.84
COL1A2-204ENST00000467931 MTFR1LQ9H019 292 aa26.56■■□□□ 1.84
COL1A2-204ENST00000467931 TMF1P82094 1093 aa26.54■■□□□ 1.84
COL1A2-204ENST00000467931 SYTL4Q96C24 671 aaPredicted RBP26.54■■□□□ 1.84
COL1A2-204ENST00000467931 USP47Q96K76 1375 aa26.54■■□□□ 1.84
COL1A2-204ENST00000467931 QSER1Q2KHR3 1735 aa26.52■■□□□ 1.84
COL1A2-204ENST00000467931 TUBGCP6Q96RT7 1819 aa26.51■■□□□ 1.83
COL1A2-204ENST00000467931 RRS1Q15050 365 aaKnown RBP26.51■■□□□ 1.83
COL1A2-204ENST00000467931 ZNF827Q17R98 1081 aa26.51■■□□□ 1.83
COL1A2-204ENST00000467931 GGNBP2Q9H3C7 697 aa26.51■■□□□ 1.83
COL1A2-204ENST00000467931 RTL1A6NKG5 1358 aa26.5■■□□□ 1.83
COL1A2-204ENST00000467931 FHDC1Q9C0D6 1143 aaPredicted RBP26.5■■□□□ 1.83
COL1A2-204ENST00000467931 LRRC4BQ9NT99 713 aa26.5■■□□□ 1.83
COL1A2-204ENST00000467931 MEGF6O75095 1541 aa26.49■■□□□ 1.83
COL1A2-204ENST00000467931 SMG6Q86US8 1419 aaKnown RBP26.49■■□□□ 1.83
COL1A2-204ENST00000467931 LY75O60449 1722 aa26.49■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms