RNA–Protein interactions for RNA: ENST00000467707.1

GAPVD1-211, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 787 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-211ENST00000467707 IFFO2Q5TF58 517 aa9.27□□□□□ -0.93
GAPVD1-211ENST00000467707 USP17L2Q6R6M4 530 aa9.27□□□□□ -0.93
GAPVD1-211ENST00000467707 USP17L1Q7RTZ2 530 aa9.27□□□□□ -0.93
GAPVD1-211ENST00000467707 CHIC2Q9UKJ5 165 aa9.27□□□□□ -0.93
GAPVD1-211ENST00000467707 PIK3CDO00329 1044 aa9.26□□□□□ -0.93
GAPVD1-211ENST00000467707 PPP1R18Q6NYC8 613 aa9.26□□□□□ -0.93
GAPVD1-211ENST00000467707 SEPT12Q8IYM1 358 aa9.26□□□□□ -0.93
GAPVD1-211ENST00000467707 KCTD17Q8N5Z5 321 aa9.26□□□□□ -0.93
GAPVD1-211ENST00000467707 FOXJ1Q92949 421 aa9.26□□□□□ -0.93
GAPVD1-211ENST00000467707 PPEF1O14829 653 aaPredicted RBP9.25□□□□□ -0.93
GAPVD1-211ENST00000467707 CD2BP2O95400 341 aaKnown RBP9.25□□□□□ -0.93
GAPVD1-211ENST00000467707 VARSP26640 1264 aaKnown RBP9.25□□□□□ -0.93
GAPVD1-211ENST00000467707 PLPP7Q8NBV4 271 aa9.25□□□□□ -0.93
GAPVD1-211ENST00000467707 TRIM52Q96A61 297 aa9.25□□□□□ -0.93
GAPVD1-211ENST00000467707 ATP5J2-PTCD1G3V325 749 aa9.24□□□□□ -0.93
GAPVD1-211ENST00000467707 ELOAQ14241 798 aaKnown RBP9.24□□□□□ -0.93
GAPVD1-211ENST00000467707 C4orf48Q5BLP8 95 aa9.24□□□□□ -0.93
GAPVD1-211ENST00000467707 KANK4Q5T7N3 995 aaPredicted RBP9.24□□□□□ -0.93
GAPVD1-211ENST00000467707 FAM174AQ8TBP5 190 aa9.24□□□□□ -0.93
GAPVD1-211ENST00000467707 EML3Q32P44 896 aa9.23□□□□□ -0.93
GAPVD1-211ENST00000467707 MAP4K5Q9Y4K4 846 aa9.23□□□□□ -0.93
GAPVD1-211ENST00000467707 ZBTB7CA1YPR0 619 aa9.22□□□□□ -0.93
GAPVD1-211ENST00000467707 TRIM50Q86XT4 487 aa9.22□□□□□ -0.93
GAPVD1-211ENST00000467707 FAM196BA6NMK8 535 aa9.21□□□□□ -0.94
GAPVD1-211ENST00000467707 ESPNB1AK53 854 aa9.21□□□□□ -0.94
GAPVD1-211ENST00000467707 PATL2C9JE40 543 aaKnown RBP9.21□□□□□ -0.94
GAPVD1-211ENST00000467707 NCOA4Q13772 614 aa9.21□□□□□ -0.94
GAPVD1-211ENST00000467707 PLA2G2CQ5R387 149 aa9.21□□□□□ -0.94
GAPVD1-211ENST00000467707 SIRT1Q96EB6 747 aa9.21□□□□□ -0.94
GAPVD1-211ENST00000467707 MKRN1Q9UHC7 482 aaKnown RBP9.21□□□□□ -0.94
GAPVD1-211ENST00000467707 DOLKQ9UPQ8 538 aa9.21□□□□□ -0.94
GAPVD1-211ENST00000467707 GIGYF1O75420 1035 aaPredicted RBP9.2□□□□□ -0.94
GAPVD1-211ENST00000467707 ATP1A2P50993 1020 aa9.2□□□□□ -0.94
GAPVD1-211ENST00000467707 MMRN1Q13201 1228 aa9.2□□□□□ -0.94
GAPVD1-211ENST00000467707 LARP1Q6PKG0 1096 aaKnown RBP9.2□□□□□ -0.94
GAPVD1-211ENST00000467707 TRAF7Q6Q0C0 670 aa9.2□□□□□ -0.94
GAPVD1-211ENST00000467707 MPNDQ8N594 471 aa9.19□□□□□ -0.94
GAPVD1-211ENST00000467707 NOD1Q9Y239 953 aa9.19□□□□□ -0.94
GAPVD1-211ENST00000467707 SKOR1P84550 965 aa9.18□□□□□ -0.94
GAPVD1-211ENST00000467707 DEPDC4Q8N2C3 294 aa9.18□□□□□ -0.94
GAPVD1-211ENST00000467707 EHBP1Q8NDI1 1231 aa9.18□□□□□ -0.94
GAPVD1-211ENST00000467707 KCTD15Q96SI1 283 aaPredicted RBP9.18□□□□□ -0.94
GAPVD1-211ENST00000467707 RASA1P20936 1047 aa9.17□□□□□ -0.94
GAPVD1-211ENST00000467707 USP4Q13107 963 aa9.17□□□□□ -0.94
GAPVD1-211ENST00000467707 CDCA8Q53HL2 280 aa9.17□□□□□ -0.94
GAPVD1-211ENST00000467707 B4GALNT3Q6L9W6 998 aa9.17□□□□□ -0.94
GAPVD1-211ENST00000467707 CDK15Q96Q40 435 aa9.17□□□□□ -0.94
GAPVD1-211ENST00000467707 USP17L15C9J2P7 530 aa9.16□□□□□ -0.94
GAPVD1-211ENST00000467707 USP17L10C9JJH3 530 aa9.16□□□□□ -0.94
GAPVD1-211ENST00000467707 USP17L13C9JLJ4 530 aa9.16□□□□□ -0.94
GAPVD1-211ENST00000467707 USP17L12C9JPN9 530 aa9.16□□□□□ -0.94
GAPVD1-211ENST00000467707 USP17L11C9JVI0 530 aa9.16□□□□□ -0.94
GAPVD1-211ENST00000467707 USP17L21D6R901 530 aa9.16□□□□□ -0.94
GAPVD1-211ENST00000467707 USP17L18D6R9N7 530 aa9.16□□□□□ -0.94
GAPVD1-211ENST00000467707 USP17L22D6RA61 530 aa9.16□□□□□ -0.94
GAPVD1-211ENST00000467707 USP17L17D6RBQ6 530 aa9.16□□□□□ -0.94
GAPVD1-211ENST00000467707 USP17L19D6RCP7 530 aa9.16□□□□□ -0.94
GAPVD1-211ENST00000467707 USP17L20D6RJB6 530 aa9.16□□□□□ -0.94
GAPVD1-211ENST00000467707 BRD1O95696 1058 aa9.16□□□□□ -0.94
GAPVD1-211ENST00000467707 USP17L24Q0WX57 530 aa9.16□□□□□ -0.94
GAPVD1-211ENST00000467707 RC3H1Q5TC82 1133 aaKnown RBP9.16□□□□□ -0.94
GAPVD1-211ENST00000467707 VASH1Q7L8A9 365 aaPredicted RBP9.16□□□□□ -0.94
GAPVD1-211ENST00000467707 CCDC85AQ96PX6 553 aaPredicted RBP9.16□□□□□ -0.94
GAPVD1-211ENST00000467707 NOVA2Q9UNW9 492 aaKnown RBP9.16□□□□□ -0.94
GAPVD1-211ENST00000467707 DHX9Q08211 1270 aaKnown RBP9.15□□□□□ -0.94
GAPVD1-211ENST00000467707 TRIM26Q12899 539 aaPredicted RBP9.15□□□□□ -0.94
GAPVD1-211ENST00000467707 PTK7Q13308 1070 aa9.15□□□□□ -0.94
GAPVD1-211ENST00000467707 LARGE2Q8N3Y3 721 aa9.15□□□□□ -0.94
GAPVD1-211ENST00000467707 SLC19A1P41440 591 aa9.14□□□□□ -0.95
GAPVD1-211ENST00000467707 OXLD1Q5BKU9 147 aa9.14□□□□□ -0.95
GAPVD1-211ENST00000467707 OGFOD1Q8N543 542 aa9.14□□□□□ -0.95
GAPVD1-211ENST00000467707 PCDHB11Q9Y5F2 797 aa9.14□□□□□ -0.95
GAPVD1-211ENST00000467707 TMEM88BA6NKF7 163 aa9.13□□□□□ -0.95
GAPVD1-211ENST00000467707 WNT7AO00755 349 aa9.13□□□□□ -0.95
GAPVD1-211ENST00000467707 MYCP01106 439 aaPredicted RBP9.13□□□□□ -0.95
GAPVD1-211ENST00000467707 KCNA1Q09470 495 aa9.13□□□□□ -0.95
GAPVD1-211ENST00000467707 CRTC2Q53ET0 693 aaPredicted RBP9.13□□□□□ -0.95
GAPVD1-211ENST00000467707 LIAT1Q6ZQX7 453 aa9.13□□□□□ -0.95
GAPVD1-211ENST00000467707 FAM200AQ8TCP9 573 aa9.13□□□□□ -0.95
GAPVD1-211ENST00000467707 CDCA7Q9BWT1 371 aaPredicted RBP9.13□□□□□ -0.95
GAPVD1-211ENST00000467707 DNAAF2Q9NVR5 837 aaKnown RBP9.13□□□□□ -0.95
GAPVD1-211ENST00000467707 RBM19Q9Y4C8 960 aaKnown RBP9.13□□□□□ -0.95
GAPVD1-211ENST00000467707 TSGA10IPQ3SY00 556 aa9.12□□□□□ -0.95
GAPVD1-211ENST00000467707 INTS6LQ5JSJ4 861 aaKnown RBP9.12□□□□□ -0.95
GAPVD1-211ENST00000467707 ANKMY2Q8IV38 441 aa9.12□□□□□ -0.95
GAPVD1-211ENST00000467707 SIX5Q8N196 739 aa9.12□□□□□ -0.95
GAPVD1-211ENST00000467707 ZMIZ1Q9ULJ6 1067 aa9.12□□□□□ -0.95
GAPVD1-211ENST00000467707 GTF2IP78347 998 aa9.11□□□□□ -0.95
GAPVD1-211ENST00000467707 NR5A1Q13285 461 aa9.11□□□□□ -0.95
GAPVD1-211ENST00000467707 SWI5Q1ZZU3 235 aa9.11□□□□□ -0.95
GAPVD1-211ENST00000467707 TMEM164Q5U3C3 297 aa9.11□□□□□ -0.95
GAPVD1-211ENST00000467707 AEBP1Q8IUX7 1158 aa9.11□□□□□ -0.95
GAPVD1-211ENST00000467707 ESF1Q9H501 851 aaKnown RBP9.11□□□□□ -0.95
GAPVD1-211ENST00000467707 PODXL2Q9NZ53 605 aa9.11□□□□□ -0.95
GAPVD1-211ENST00000467707 ADH1CP00326 375 aa9.1□□□□□ -0.95
GAPVD1-211ENST00000467707 CLDN10P78369 228 aa9.1□□□□□ -0.95
GAPVD1-211ENST00000467707 ARID5BQ14865 1188 aa9.1□□□□□ -0.95
GAPVD1-211ENST00000467707 SIAH2O43255 324 aa9.09□□□□□ -0.95
GAPVD1-211ENST00000467707 FSHRP23945 695 aa9.09□□□□□ -0.95
GAPVD1-211ENST00000467707 SPRYD7Q5W111 196 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 690.7 ms