RNA–Protein interactions for RNA: ENST00000467560.5

ATPAF2-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-204ENST00000467560 ST20-MTHFSA0A0A6YYL1 179 aa20.94■□□□□ 0.94
ATPAF2-204ENST00000467560 KCNH5Q8NCM2 988 aa20.94■□□□□ 0.94
ATPAF2-204ENST00000467560 CAMKK2Q96RR4 588 aa20.94■□□□□ 0.94
ATPAF2-204ENST00000467560 TOM1L2Q6ZVM7 507 aa20.93■□□□□ 0.94
ATPAF2-204ENST00000467560 WDR17Q8IZU2 1322 aa20.93■□□□□ 0.94
ATPAF2-204ENST00000467560 PARP4Q9UKK3 1724 aaKnown RBP20.92■□□□□ 0.94
ATPAF2-204ENST00000467560 USP31Q70CQ4 1352 aa20.92■□□□□ 0.94
ATPAF2-204ENST00000467560 A0A1W2PP64 1363 aa20.91■□□□□ 0.94
ATPAF2-204ENST00000467560 APBA3O96018 575 aa20.9■□□□□ 0.94
ATPAF2-204ENST00000467560 RGPD5Q99666 1765 aa20.9■□□□□ 0.94
ATPAF2-204ENST00000467560 LRRC37A3O60309 1634 aa20.89■□□□□ 0.93
ATPAF2-204ENST00000467560 HDGFL2Q7Z4V5 671 aaPredicted RBP20.88■□□□□ 0.93
ATPAF2-204ENST00000467560 PEAK1Q9H792 1746 aa20.87■□□□□ 0.93
ATPAF2-204ENST00000467560 USP54Q70EL1 1684 aa20.87■□□□□ 0.93
ATPAF2-204ENST00000467560 R3HDM1Q15032 1099 aaKnown RBP20.87■□□□□ 0.93
ATPAF2-204ENST00000467560 PTF1AQ7RTS3 328 aa20.87■□□□□ 0.93
ATPAF2-204ENST00000467560 PUS7Q96PZ0 661 aaKnown RBP20.87■□□□□ 0.93
ATPAF2-204ENST00000467560 EDC4Q6P2E9 1401 aaKnown RBP20.87■□□□□ 0.93
ATPAF2-204ENST00000467560 CSB-PGBD3P0DP91 1061 aa20.86■□□□□ 0.93
ATPAF2-204ENST00000467560 CARD10Q9BWT7 1032 aa20.86■□□□□ 0.93
ATPAF2-204ENST00000467560 DDB1Q16531 1140 aa20.85■□□□□ 0.93
ATPAF2-204ENST00000467560 MARCH10Q8NA82 808 aaPredicted RBP20.85■□□□□ 0.93
ATPAF2-204ENST00000467560 TERF2IPQ9NYB0 399 aa20.84■□□□□ 0.93
ATPAF2-204ENST00000467560 OVOS2A0A0G2JMS6 1433 aa20.84■□□□□ 0.93
ATPAF2-204ENST00000467560 OVOS2A0A0J9YW53 1432 aa20.84■□□□□ 0.93
ATPAF2-204ENST00000467560 OVOS2Q6IE36 1432 aa20.84■□□□□ 0.93
ATPAF2-204ENST00000467560 WNK3Q9BYP7 1800 aa20.83■□□□□ 0.93
ATPAF2-204ENST00000467560 ABCC6O95255 1503 aa20.82■□□□□ 0.92
ATPAF2-204ENST00000467560 USP47Q96K76 1375 aa20.82■□□□□ 0.92
ATPAF2-204ENST00000467560 PARD3Q8TEW0 1356 aa20.81■□□□□ 0.92
ATPAF2-204ENST00000467560 ERBB3P21860 1342 aa20.8■□□□□ 0.92
ATPAF2-204ENST00000467560 RREB1Q92766 1687 aa20.8■□□□□ 0.92
ATPAF2-204ENST00000467560 LRP5O75197 1615 aa20.8■□□□□ 0.92
ATPAF2-204ENST00000467560 FBLN1P23142 703 aa20.79■□□□□ 0.92
ATPAF2-204ENST00000467560 CDCA7Q9BWT1 371 aaPredicted RBP20.79■□□□□ 0.92
ATPAF2-204ENST00000467560 LTN1O94822 1766 aa20.79■□□□□ 0.92
ATPAF2-204ENST00000467560 NUP188Q5SRE5 1749 aa20.78■□□□□ 0.92
ATPAF2-204ENST00000467560 CCDC7Q96M83 1385 aa20.77■□□□□ 0.92
ATPAF2-204ENST00000467560 NINLQ9Y2I6 1382 aa20.77■□□□□ 0.92
ATPAF2-204ENST00000467560 SBF2Q86WG5 1849 aa20.77■□□□□ 0.92
ATPAF2-204ENST00000467560 ANKRD24Q8TF21 1146 aa20.77■□□□□ 0.92
ATPAF2-204ENST00000467560 NLRP2Q9NX02 1062 aa20.77■□□□□ 0.92
ATPAF2-204ENST00000467560 PCGF6Q9BYE7 350 aa20.76■□□□□ 0.91
ATPAF2-204ENST00000467560 BCL11BQ9C0K0 894 aaPredicted RBP20.75■□□□□ 0.91
ATPAF2-204ENST00000467560 BCL9O00512 1426 aa20.75■□□□□ 0.91
ATPAF2-204ENST00000467560 ANKRD36BQ8N2N9 1353 aa20.74■□□□□ 0.91
ATPAF2-204ENST00000467560 C11orf95C9JLR9 678 aaPredicted RBP20.74■□□□□ 0.91
ATPAF2-204ENST00000467560 EXOC5O00471 708 aa20.74■□□□□ 0.91
ATPAF2-204ENST00000467560 TMF1P82094 1093 aa20.74■□□□□ 0.91
ATPAF2-204ENST00000467560 TNS2Q63HR2 1409 aa20.73■□□□□ 0.91
ATPAF2-204ENST00000467560 PROM2Q8N271 834 aa20.73■□□□□ 0.91
ATPAF2-204ENST00000467560 IP6K1Q92551 441 aa20.73■□□□□ 0.91
ATPAF2-204ENST00000467560 PLSCR1O15162 318 aa20.72■□□□□ 0.91
ATPAF2-204ENST00000467560 KCNQ2O43526 872 aa20.72■□□□□ 0.91
ATPAF2-204ENST00000467560 LTV1Q96GA3 475 aaPredicted RBP20.72■□□□□ 0.91
ATPAF2-204ENST00000467560 COG3Q96JB2 828 aa20.72■□□□□ 0.91
ATPAF2-204ENST00000467560 MAP3K19Q56UN5 1328 aa20.72■□□□□ 0.91
ATPAF2-204ENST00000467560 SLC24A1O60721 1099 aa20.71■□□□□ 0.91
ATPAF2-204ENST00000467560 FYB1O15117 783 aa20.7■□□□□ 0.9
ATPAF2-204ENST00000467560 IL2RBP14784 551 aa20.7■□□□□ 0.9
ATPAF2-204ENST00000467560 GGNBP2Q9H3C7 697 aa20.7■□□□□ 0.9
ATPAF2-204ENST00000467560 ANO8Q9HCE9 1232 aaPredicted RBP20.7■□□□□ 0.9
ATPAF2-204ENST00000467560 HOXC9P31274 260 aa20.69■□□□□ 0.9
ATPAF2-204ENST00000467560 NBPF14Q5TI25 921 aa20.69■□□□□ 0.9
ATPAF2-204ENST00000467560 ACSBG1Q96GR2 724 aa20.68■□□□□ 0.9
ATPAF2-204ENST00000467560 RRS1Q15050 365 aaKnown RBP20.67■□□□□ 0.9
ATPAF2-204ENST00000467560 CARD14Q9BXL6 1004 aa20.67■□□□□ 0.9
ATPAF2-204ENST00000467560 TIMELESSQ9UNS1 1208 aa20.67■□□□□ 0.9
ATPAF2-204ENST00000467560 RGPD3A6NKT7 1758 aaPredicted RBP20.67■□□□□ 0.9
ATPAF2-204ENST00000467560 RGPD4Q7Z3J3 1758 aa20.67■□□□□ 0.9
ATPAF2-204ENST00000467560 CLSPNQ9HAW4 1339 aa20.65■□□□□ 0.9
ATPAF2-204ENST00000467560 PDGFDQ9GZP0 370 aaPredicted RBP20.65■□□□□ 0.9
ATPAF2-204ENST00000467560 AMPHP49418 695 aa20.64■□□□□ 0.89
ATPAF2-204ENST00000467560 MYOM1P52179 1685 aa20.64■□□□□ 0.89
ATPAF2-204ENST00000467560 TXNRD1Q16881 649 aa20.63■□□□□ 0.89
ATPAF2-204ENST00000467560 NHSQ6T4R5 1651 aa20.62■□□□□ 0.89
ATPAF2-204ENST00000467560 FAM208AQ9UK61 1670 aaKnown RBP20.61■□□□□ 0.89
ATPAF2-204ENST00000467560 CDCA8Q53HL2 280 aa20.61■□□□□ 0.89
ATPAF2-204ENST00000467560 RGPD2P0DJD1 1756 aa20.6■□□□□ 0.89
ATPAF2-204ENST00000467560 NBPF6Q5VWK0 638 aa20.6■□□□□ 0.89
ATPAF2-204ENST00000467560 DDX54Q8TDD1 881 aaKnown RBP20.6■□□□□ 0.89
ATPAF2-204ENST00000467560 NBPF4Q96M43 638 aa20.6■□□□□ 0.89
ATPAF2-204ENST00000467560 NSD3Q9BZ95 1437 aa20.6■□□□□ 0.89
ATPAF2-204ENST00000467560 MEGF6O75095 1541 aa20.59■□□□□ 0.89
ATPAF2-204ENST00000467560 USHBP1Q8N6Y0 703 aa20.59■□□□□ 0.89
ATPAF2-204ENST00000467560 RTL1A6NKG5 1358 aa20.59■□□□□ 0.89
ATPAF2-204ENST00000467560 HSP90AB2PQ58FF8 381 aa20.58■□□□□ 0.89
ATPAF2-204ENST00000467560 KIF20BQ96Q89 1820 aa20.57■□□□□ 0.88
ATPAF2-204ENST00000467560 CASZ1Q86V15 1759 aa20.57■□□□□ 0.88
ATPAF2-204ENST00000467560 SPON1Q9HCB6 807 aa20.55■□□□□ 0.88
ATPAF2-204ENST00000467560 EMILIN1Q9Y6C2 1016 aa20.55■□□□□ 0.88
ATPAF2-204ENST00000467560 BTAF1O14981 1849 aa20.55■□□□□ 0.88
ATPAF2-204ENST00000467560 SHANK3Q9BYB0 1731 aa20.54■□□□□ 0.88
ATPAF2-204ENST00000467560 SLC15A2Q16348 729 aa20.54■□□□□ 0.88
ATPAF2-204ENST00000467560 LRRC4BQ9NT99 713 aa20.54■□□□□ 0.88
ATPAF2-204ENST00000467560 ZBTB7AO95365 584 aa20.53■□□□□ 0.88
ATPAF2-204ENST00000467560 ZCRB1Q8TBF4 217 aaKnown RBP20.53■□□□□ 0.88
ATPAF2-204ENST00000467560 CCER1Q8TC90 406 aaPredicted RBP20.53■□□□□ 0.88
ATPAF2-204ENST00000467560 STK32BQ9NY57 414 aa20.53■□□□□ 0.88
ATPAF2-204ENST00000467560 INSRP06213 1382 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms