RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 PTK2Q05397 1052 aa8.13□□□□□ -1.11
VPS50-209ENST00000467326 ERFEQ4G0M1 354 aa8.13□□□□□ -1.11
VPS50-209ENST00000467326 CAPN5O15484 640 aaPredicted RBP8.12□□□□□ -1.11
VPS50-209ENST00000467326 GPR37L1O60883 481 aa8.12□□□□□ -1.11
VPS50-209ENST00000467326 TRMT44Q8IYL2 757 aaKnown RBP8.12□□□□□ -1.11
VPS50-209ENST00000467326 MPNDQ8N594 471 aa8.12□□□□□ -1.11
VPS50-209ENST00000467326 SLC10A4Q96EP9 437 aa8.12□□□□□ -1.11
VPS50-209ENST00000467326 H3BM21 787 aa8.11□□□□□ -1.11
VPS50-209ENST00000467326 ADH1CP00326 375 aa8.11□□□□□ -1.11
VPS50-209ENST00000467326 ARID5BQ14865 1188 aa8.11□□□□□ -1.11
VPS50-209ENST00000467326 ZBTB33Q86T24 672 aa8.11□□□□□ -1.11
VPS50-209ENST00000467326 ADAM32Q8TC27 787 aa8.11□□□□□ -1.11
VPS50-209ENST00000467326 OCSTAMPQ9BR26 566 aa8.11□□□□□ -1.11
VPS50-209ENST00000467326 TBC1D2BQ9UPU7 963 aa8.11□□□□□ -1.11
VPS50-209ENST00000467326 CDK15Q96Q40 435 aa8.1□□□□□ -1.11
VPS50-209ENST00000467326 PRM3Q9NNZ6 103 aa8.1□□□□□ -1.11
VPS50-209ENST00000467326 MAP4K5Q9Y4K4 846 aa8.1□□□□□ -1.11
VPS50-209ENST00000467326 ZBBXA8MT70 800 aa8.09□□□□□ -1.11
VPS50-209ENST00000467326 FBXO45P0C2W1 286 aa8.09□□□□□ -1.11
VPS50-209ENST00000467326 FSHRP23945 695 aa8.09□□□□□ -1.11
VPS50-209ENST00000467326 NNTQ13423 1086 aa8.08□□□□□ -1.12
VPS50-209ENST00000467326 VASH1Q7L8A9 365 aaPredicted RBP8.08□□□□□ -1.12
VPS50-209ENST00000467326 FLIIQ13045 1269 aa8.07□□□□□ -1.12
VPS50-209ENST00000467326 CDV3Q9UKY7 258 aaKnown RBP8.07□□□□□ -1.12
VPS50-209ENST00000467326 NR1H3Q13133 447 aa8.06□□□□□ -1.12
VPS50-209ENST00000467326 SCARF1Q14162 830 aa8.06□□□□□ -1.12
VPS50-209ENST00000467326 NBPF20Q3BBV1 942 aa8.06□□□□□ -1.12
VPS50-209ENST00000467326 GDPD2Q9HCC8 539 aa8.06□□□□□ -1.12
VPS50-209ENST00000467326 BMP1P13497 986 aa8.05□□□□□ -1.12
VPS50-209ENST00000467326 NR5A1Q13285 461 aa8.05□□□□□ -1.12
VPS50-209ENST00000467326 TRIM46Q7Z4K8 759 aa8.05□□□□□ -1.12
VPS50-209ENST00000467326 DZIP3Q86Y13 1208 aaKnown RBP8.05□□□□□ -1.12
VPS50-209ENST00000467326 NR3C2P08235 984 aa8.04□□□□□ -1.12
VPS50-209ENST00000467326 GRM5P41594 1212 aa8.04□□□□□ -1.12
VPS50-209ENST00000467326 ABL2P42684 1182 aa8.04□□□□□ -1.12
VPS50-209ENST00000467326 PCDHB9Q9Y5E1 797 aa8.04□□□□□ -1.12
VPS50-209ENST00000467326 UBTFP17480 764 aaKnown RBP8.03□□□□□ -1.12
VPS50-209ENST00000467326 IRF5Q13568 498 aa8.03□□□□□ -1.12
VPS50-209ENST00000467326 KCTD15Q96SI1 283 aaPredicted RBP8.03□□□□□ -1.12
VPS50-209ENST00000467326 COG6Q9Y2V7 657 aa8.03□□□□□ -1.12
VPS50-209ENST00000467326 ZNF330Q9Y3S2 320 aaPredicted RBP8.03□□□□□ -1.12
VPS50-209ENST00000467326 VEGFBP49765 207 aa8.02□□□□□ -1.13
VPS50-209ENST00000467326 WDR4P57081 412 aaKnown RBP8.02□□□□□ -1.13
VPS50-209ENST00000467326 ZNF592Q92610 1267 aa8.02□□□□□ -1.13
VPS50-209ENST00000467326 ZFP42Q96MM3 310 aa8.02□□□□□ -1.13
VPS50-209ENST00000467326 RAD21O60216 631 aa8.01□□□□□ -1.13
VPS50-209ENST00000467326 INTS6LQ5JSJ4 861 aaKnown RBP8.01□□□□□ -1.13
VPS50-209ENST00000467326 CCDC116Q8IYX3 515 aa8.01□□□□□ -1.13
VPS50-209ENST00000467326 TIMP2P16035 220 aa8□□□□□ -1.13
VPS50-209ENST00000467326 POM121Q96HA1 1249 aa8□□□□□ -1.13
VPS50-209ENST00000467326 ERBB4Q15303 1308 aa8□□□□□ -1.13
VPS50-209ENST00000467326 RNF225M0QZC1 329 aaPredicted RBP7.99□□□□□ -1.13
VPS50-209ENST00000467326 ZIC2O95409 532 aaPredicted RBP7.99□□□□□ -1.13
VPS50-209ENST00000467326 VSIG8P0DPA2 414 aa7.99□□□□□ -1.13
VPS50-209ENST00000467326 RAB15P59190 212 aa7.99□□□□□ -1.13
VPS50-209ENST00000467326 DHX9Q08211 1270 aaKnown RBP7.99□□□□□ -1.13
VPS50-209ENST00000467326 VAC14Q08AM6 782 aa7.99□□□□□ -1.13
VPS50-209ENST00000467326 KCNMA1Q12791 1236 aa7.99□□□□□ -1.13
VPS50-209ENST00000467326 MRPL14Q6P1L8 145 aaKnown RBP7.99□□□□□ -1.13
VPS50-209ENST00000467326 ITPKCQ96DU7 683 aa7.99□□□□□ -1.13
VPS50-209ENST00000467326 ZFAND3Q9H8U3 227 aa7.99□□□□□ -1.13
VPS50-209ENST00000467326 EMILIN1Q9Y6C2 1016 aa7.99□□□□□ -1.13
VPS50-209ENST00000467326 WASHC4Q2M389 1173 aa7.98□□□□□ -1.13
VPS50-209ENST00000467326 PPP1R26Q5T8A7 1209 aaPredicted RBP7.98□□□□□ -1.13
VPS50-209ENST00000467326 WWC1Q8IX03 1113 aa7.98□□□□□ -1.13
VPS50-209ENST00000467326 KLF16Q9BXK1 252 aaPredicted RBP7.98□□□□□ -1.13
VPS50-209ENST00000467326 ESPNB1AK53 854 aa7.97□□□□□ -1.13
VPS50-209ENST00000467326 MCCD1P59942 119 aaPredicted RBP7.97□□□□□ -1.13
VPS50-209ENST00000467326 EIF4G2P78344 907 aaKnown RBP eCLIP7.97□□□□□ -1.13
VPS50-209ENST00000467326 SEPT12Q8IYM1 358 aa7.97□□□□□ -1.13
VPS50-209ENST00000467326 PGPEP1Q9NXJ5 209 aa7.97□□□□□ -1.13
VPS50-209ENST00000467326 GIGYF1O75420 1035 aaPredicted RBP7.95□□□□□ -1.14
VPS50-209ENST00000467326 UPP2O95045 317 aa7.94□□□□□ -1.14
VPS50-209ENST00000467326 TMEM151AQ8N4L1 468 aa7.94□□□□□ -1.14
VPS50-209ENST00000467326 MEIOBQ8N635 442 aa7.94□□□□□ -1.14
VPS50-209ENST00000467326 ERVH48-1M5A8F1 160 aa7.93□□□□□ -1.14
VPS50-209ENST00000467326 MAN1A2O60476 641 aa7.93□□□□□ -1.14
VPS50-209ENST00000467326 SOX11P35716 441 aa7.93□□□□□ -1.14
VPS50-209ENST00000467326 GSK3AP49840 483 aa7.93□□□□□ -1.14
VPS50-209ENST00000467326 RNF20Q5VTR2 975 aa7.93□□□□□ -1.14
VPS50-209ENST00000467326 KCTD17Q8N5Z5 321 aa7.93□□□□□ -1.14
VPS50-209ENST00000467326 ZNF784Q8NCA9 323 aaPredicted RBP7.93□□□□□ -1.14
VPS50-209ENST00000467326 CLUAP1Q96AJ1 413 aa7.93□□□□□ -1.14
VPS50-209ENST00000467326 PURBQ96QR8 312 aaKnown RBP7.93□□□□□ -1.14
VPS50-209ENST00000467326 PROSER2Q86WR7 435 aaPredicted RBP7.92□□□□□ -1.14
VPS50-209ENST00000467326 CCDC125Q86Z20 511 aa7.92□□□□□ -1.14
VPS50-209ENST00000467326 TMPRSS4Q9NRS4 437 aa7.92□□□□□ -1.14
VPS50-209ENST00000467326 LINC00528Q8N1L1 170 aa7.91□□□□□ -1.14
VPS50-209ENST00000467326 CBLBQ13191 982 aa7.9□□□□□ -1.14
VPS50-209ENST00000467326 SEMA3FQ13275 785 aa7.9□□□□□ -1.14
VPS50-209ENST00000467326 TRIM52Q96A61 297 aa7.9□□□□□ -1.14
VPS50-209ENST00000467326 CYLDQ9NQC7 956 aa7.9□□□□□ -1.14
VPS50-209ENST00000467326 CEP126Q9P2H0 1117 aa7.9□□□□□ -1.14
VPS50-209ENST00000467326 PCDHB11Q9Y5F2 797 aa7.9□□□□□ -1.14
VPS50-209ENST00000467326 GDF11O95390 407 aa7.89□□□□□ -1.15
VPS50-209ENST00000467326 SLFNL1Q499Z3 407 aa7.89□□□□□ -1.15
VPS50-209ENST00000467326 Q6ZVU0 165 aa7.89□□□□□ -1.15
VPS50-209ENST00000467326 POM121CA8CG34 1229 aa7.88□□□□□ -1.15
VPS50-209ENST00000467326 LILRA1O75019 489 aa7.88□□□□□ -1.15
VPS50-209ENST00000467326 BMP2P12643 396 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms