RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 VSIG8P0DPA2 414 aa9.96□□□□□ -0.82
SMC4-207ENST00000467263 SKIV2LQ15477 1246 aaKnown RBP9.96□□□□□ -0.82
SMC4-207ENST00000467263 CCDC116Q8IYX3 515 aa9.96□□□□□ -0.82
SMC4-207ENST00000467263 EPS8L1Q8TE68 723 aa9.96□□□□□ -0.82
SMC4-207ENST00000467263 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.96□□□□□ -0.82
SMC4-207ENST00000467263 PPP1R26Q5T8A7 1209 aaPredicted RBP9.95□□□□□ -0.82
SMC4-207ENST00000467263 FKBPLQ9UIM3 349 aa9.95□□□□□ -0.82
SMC4-207ENST00000467263 TPRNQ4KMQ1 711 aa9.94□□□□□ -0.82
SMC4-207ENST00000467263 SH3D19Q5HYK7 790 aa9.94□□□□□ -0.82
SMC4-207ENST00000467263 ARHGAP9Q9BRR9 750 aa9.94□□□□□ -0.82
SMC4-207ENST00000467263 EMILIN1Q9Y6C2 1016 aa9.94□□□□□ -0.82
SMC4-207ENST00000467263 PDXDC2PQ6P474 469 aa9.93□□□□□ -0.82
SMC4-207ENST00000467263 GPKOWQ92917 476 aaPredicted RBP eCLIP9.93□□□□□ -0.821e-13■□□□□ 9.1
SMC4-207ENST00000467263 FIGNL2A6NMB9 653 aa9.92□□□□□ -0.82
SMC4-207ENST00000467263 UPP2O95045 317 aa9.92□□□□□ -0.82
SMC4-207ENST00000467263 KCTD15Q96SI1 283 aaPredicted RBP9.92□□□□□ -0.82
SMC4-207ENST00000467263 TSEN34Q9BSV6 310 aaKnown RBP9.92□□□□□ -0.82
SMC4-207ENST00000467263 HMX1Q9NP08 348 aaPredicted RBP9.92□□□□□ -0.82
SMC4-207ENST00000467263 PPP2R2DQ66LE6 453 aa9.91□□□□□ -0.82
SMC4-207ENST00000467263 GPR161Q8N6U8 529 aaKnown RBP9.91□□□□□ -0.82
SMC4-207ENST00000467263 AP1G2O75843 785 aa9.9□□□□□ -0.82
SMC4-207ENST00000467263 Q6ZVU0 165 aa9.9□□□□□ -0.82
SMC4-207ENST00000467263 AGBL1Q96MI9 1066 aa9.9□□□□□ -0.82
SMC4-207ENST00000467263 TTLL8A6PVC2 850 aa9.89□□□□□ -0.83
SMC4-207ENST00000467263 KRT76Q01546 638 aa9.89□□□□□ -0.83
SMC4-207ENST00000467263 INTS6LQ5JSJ4 861 aaKnown RBP9.89□□□□□ -0.83
SMC4-207ENST00000467263 PRKCSHP14314 528 aaPredicted RBP9.88□□□□□ -0.83
SMC4-207ENST00000467263 ADAM32Q8TC27 787 aa9.88□□□□□ -0.83
SMC4-207ENST00000467263 SLC10A4Q96EP9 437 aa9.88□□□□□ -0.83
SMC4-207ENST00000467263 ATP1B4Q9UN42 357 aaPredicted RBP9.88□□□□□ -0.83
SMC4-207ENST00000467263 PTSQ03393 145 aa9.87□□□□□ -0.83
SMC4-207ENST00000467263 ZBTB33Q86T24 672 aa9.87□□□□□ -0.83
SMC4-207ENST00000467263 TMPRSS4Q9NRS4 437 aa9.87□□□□□ -0.83
SMC4-207ENST00000467263 FAM181BA6NEQ2 426 aa9.86□□□□□ -0.83
SMC4-207ENST00000467263 SPINT1O43278 529 aa9.86□□□□□ -0.83
SMC4-207ENST00000467263 CTSOP43234 321 aaPredicted RBP9.86□□□□□ -0.83
SMC4-207ENST00000467263 DDRGK1Q96HY6 314 aa9.86□□□□□ -0.83
SMC4-207ENST00000467263 USP17L8P0C7I0 530 aa9.85□□□□□ -0.83
SMC4-207ENST00000467263 RELBQ01201 579 aa9.85□□□□□ -0.83
SMC4-207ENST00000467263 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.85□□□□□ -0.83
SMC4-207ENST00000467263 PGPEP1Q9NXJ5 209 aa9.85□□□□□ -0.83
SMC4-207ENST00000467263 RAB15P59190 212 aa9.84□□□□□ -0.83
SMC4-207ENST00000467263 INSM2Q96T92 566 aaPredicted RBP9.84□□□□□ -0.83
SMC4-207ENST00000467263 PTK2Q05397 1052 aa9.83□□□□□ -0.84
SMC4-207ENST00000467263 ZC3H4Q9UPT8 1303 aaKnown RBP9.82□□□□□ -0.84
SMC4-207ENST00000467263 ADD1P35611 737 aaKnown RBP9.82□□□□□ -0.84
SMC4-207ENST00000467263 CCDC155Q8N6L0 562 aa9.82□□□□□ -0.84
SMC4-207ENST00000467263 ZNF395Q9H8N7 513 aaPredicted RBP9.82□□□□□ -0.84
SMC4-207ENST00000467263 RFC5P40937 340 aa9.81□□□□□ -0.84
SMC4-207ENST00000467263 KDF1Q8NAX2 398 aaPredicted RBP9.81□□□□□ -0.84
SMC4-207ENST00000467263 ZNF784Q8NCA9 323 aaPredicted RBP9.81□□□□□ -0.84
SMC4-207ENST00000467263 CNTNAP3BQ96NU0 1288 aa9.81□□□□□ -0.84
SMC4-207ENST00000467263 TRIM34Q9BYJ4 488 aa9.81□□□□□ -0.84
SMC4-207ENST00000467263 CNTNAP3Q9BZ76 1288 aa9.81□□□□□ -0.84
SMC4-207ENST00000467263 LILRA1O75019 489 aa9.8□□□□□ -0.84
SMC4-207ENST00000467263 RNFT1Q5M7Z0 435 aa9.8□□□□□ -0.84
SMC4-207ENST00000467263 CDV3Q9UKY7 258 aaKnown RBP9.8□□□□□ -0.84
SMC4-207ENST00000467263 SLC35F4A4IF30 521 aa9.79□□□□□ -0.84
SMC4-207ENST00000467263 ERVH48-1M5A8F1 160 aa9.79□□□□□ -0.84
SMC4-207ENST00000467263 DHX9Q08211 1270 aaKnown RBP9.79□□□□□ -0.84
SMC4-207ENST00000467263 GPSM3Q9Y4H4 160 aa9.79□□□□□ -0.84
SMC4-207ENST00000467263 COL25A1Q9BXS0 654 aaPredicted RBP9.78□□□□□ -0.84
SMC4-207ENST00000467263 SENP3-EIF4A1A0A087X0R7 540 aa9.77□□□□□ -0.85
SMC4-207ENST00000467263 GSK3AP49840 483 aa9.77□□□□□ -0.85
SMC4-207ENST00000467263 RNF217Q8TC41 542 aa9.77□□□□□ -0.85
SMC4-207ENST00000467263 ESPNB1AK53 854 aa9.76□□□□□ -0.85
SMC4-207ENST00000467263 FOXD4L5Q5VV16 416 aaPredicted RBP9.76□□□□□ -0.85
SMC4-207ENST00000467263 VWA5B2Q8N398 1253 aa9.76□□□□□ -0.85
SMC4-207ENST00000467263 NANOS1Q8WY41 292 aaKnown RBP9.76□□□□□ -0.85
SMC4-207ENST00000467263 POLMQ9NP87 494 aaPredicted RBP9.76□□□□□ -0.85
SMC4-207ENST00000467263 DZIP3Q86Y13 1208 aaKnown RBP9.75□□□□□ -0.85
SMC4-207ENST00000467263 ADH1AP07327 375 aa9.74□□□□□ -0.85
SMC4-207ENST00000467263 ITGA6P23229 1130 aa9.74□□□□□ -0.85
SMC4-207ENST00000467263 NBPF20Q3BBV1 942 aa9.74□□□□□ -0.85
SMC4-207ENST00000467263 WHAMMQ8TF30 809 aa9.74□□□□□ -0.85
SMC4-207ENST00000467263 CYLDQ9NQC7 956 aa9.73□□□□□ -0.85
SMC4-207ENST00000467263 CDC14CA4D256 554 aa9.72□□□□□ -0.85
SMC4-207ENST00000467263 PTGIRP43119 386 aa9.72□□□□□ -0.85
SMC4-207ENST00000467263 GJD4Q96KN9 370 aaPredicted RBP9.72□□□□□ -0.85
SMC4-207ENST00000467263 CUEDC1Q9NWM3 386 aaPredicted RBP9.72□□□□□ -0.85
SMC4-207ENST00000467263 GIGYF1O75420 1035 aaPredicted RBP9.71□□□□□ -0.86
SMC4-207ENST00000467263 ZNF385CQ66K41 422 aaPredicted RBP9.71□□□□□ -0.86
SMC4-207ENST00000467263 IL27Q8NEV9 243 aa9.7□□□□□ -0.86
SMC4-207ENST00000467263 FBXO45P0C2W1 286 aa9.69□□□□□ -0.86
SMC4-207ENST00000467263 ADAMTS8Q9UP79 889 aa9.69□□□□□ -0.86
SMC4-207ENST00000467263 KCNMA1Q12791 1236 aa9.68□□□□□ -0.86
SMC4-207ENST00000467263 PCMTD1Q96MG8 357 aaPredicted RBP9.68□□□□□ -0.86
SMC4-207ENST00000467263 RHOQP17081 205 aa9.67□□□□□ -0.86
SMC4-207ENST00000467263 SV2AQ7L0J3 742 aa9.67□□□□□ -0.86
SMC4-207ENST00000467263 PRICKLE2Q7Z3G6 844 aa9.67□□□□□ -0.86
SMC4-207ENST00000467263 PNMA1Q8ND90 353 aa9.67□□□□□ -0.86
SMC4-207ENST00000467263 PCDHB9Q9Y5E1 797 aa9.67□□□□□ -0.86
SMC4-207ENST00000467263 GPR37L1O60883 481 aa9.66□□□□□ -0.86
SMC4-207ENST00000467263 KCTD17Q8N5Z5 321 aa9.66□□□□□ -0.86
SMC4-207ENST00000467263 GOPCQ9HD26 462 aa9.66□□□□□ -0.86
SMC4-207ENST00000467263 ZBBXA8MT70 800 aa9.65□□□□□ -0.86
SMC4-207ENST00000467263 SLURP2P0DP57 97 aa9.65□□□□□ -0.86
SMC4-207ENST00000467263 NEUROD2Q15784 382 aa9.65□□□□□ -0.86
SMC4-207ENST00000467263 TMEM259Q4ZIN3 620 aa9.65□□□□□ -0.86
SMC4-207ENST00000467263 GAS6Q14393 721 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms