RNA–Protein interactions for RNA: ENST00000467152.1

PDE6B-206, Transcript of phosphodiesterase 6B, humanhuman

TSL 1 (best)

Gene PDE6B, Length 545 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-206ENST00000467152 CD163L1Q9NR16 1453 aa25.98■■□□□ 1.75
PDE6B-206ENST00000467152 KTN1Q86UP2 1357 aaKnown RBP25.97■■□□□ 1.75
PDE6B-206ENST00000467152 TRIM37O94972 964 aa25.97■■□□□ 1.75
PDE6B-206ENST00000467152 R3HDM1Q15032 1099 aaKnown RBP25.96■■□□□ 1.75
PDE6B-206ENST00000467152 EZH2Q15910 746 aaKnown RBP25.96■■□□□ 1.75
PDE6B-206ENST00000467152 CDCA8Q53HL2 280 aa25.96■■□□□ 1.75
PDE6B-206ENST00000467152 LARP1Q6PKG0 1096 aaKnown RBP25.96■■□□□ 1.75
PDE6B-206ENST00000467152 HDGFL2Q7Z4V5 671 aaPredicted RBP25.96■■□□□ 1.75
PDE6B-206ENST00000467152 CAMKK2Q96RR4 588 aa25.96■■□□□ 1.75
PDE6B-206ENST00000467152 LRRC37A3O60309 1634 aa25.96■■□□□ 1.75
PDE6B-206ENST00000467152 SBF2Q86WG5 1849 aa25.95■■□□□ 1.75
PDE6B-206ENST00000467152 PEAK1Q9H792 1746 aa25.95■■□□□ 1.74
PDE6B-206ENST00000467152 GCP02774 474 aa25.95■■□□□ 1.74
PDE6B-206ENST00000467152 NLRP6P59044 892 aa25.95■■□□□ 1.74
PDE6B-206ENST00000467152 TERF2IPQ9NYB0 399 aa25.95■■□□□ 1.74
PDE6B-206ENST00000467152 CRB1P82279 1406 aa25.95■■□□□ 1.74
PDE6B-206ENST00000467152 COL18A1P39060 1754 aa25.95■■□□□ 1.74
PDE6B-206ENST00000467152 TTC21AQ8NDW8 1320 aa25.93■■□□□ 1.74
PDE6B-206ENST00000467152 C11orf95C9JLR9 678 aaPredicted RBP25.93■■□□□ 1.74
PDE6B-206ENST00000467152 APBA3O96018 575 aa25.93■■□□□ 1.74
PDE6B-206ENST00000467152 NINLQ9Y2I6 1382 aa25.93■■□□□ 1.74
PDE6B-206ENST00000467152 AATKQ6ZMQ8 1374 aa25.91■■□□□ 1.74
PDE6B-206ENST00000467152 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.9■■□□□ 1.74
PDE6B-206ENST00000467152 A0A1W2PP64 1363 aa25.9■■□□□ 1.74
PDE6B-206ENST00000467152 OVOS2A0A0G2JMS6 1433 aa25.89■■□□□ 1.74
PDE6B-206ENST00000467152 OVOS2A0A0J9YW53 1432 aa25.89■■□□□ 1.74
PDE6B-206ENST00000467152 OVOS2Q6IE36 1432 aa25.89■■□□□ 1.74
PDE6B-206ENST00000467152 RGPD5Q99666 1765 aa25.89■■□□□ 1.73
PDE6B-206ENST00000467152 MON2Q7Z3U7 1717 aa25.87■■□□□ 1.73
PDE6B-206ENST00000467152 NME9Q86XW9 330 aa25.86■■□□□ 1.73
PDE6B-206ENST00000467152 EDC4Q6P2E9 1401 aaKnown RBP25.86■■□□□ 1.73
PDE6B-206ENST00000467152 ABCC6O95255 1503 aa25.85■■□□□ 1.73
PDE6B-206ENST00000467152 USP54Q70EL1 1684 aa25.83■■□□□ 1.73
PDE6B-206ENST00000467152 USP31Q70CQ4 1352 aa25.83■■□□□ 1.73
PDE6B-206ENST00000467152 ANKRD36BQ8N2N9 1353 aa25.83■■□□□ 1.73
PDE6B-206ENST00000467152 NBPF14Q5TI25 921 aa25.83■■□□□ 1.73
PDE6B-206ENST00000467152 ZBTB7CA1YPR0 619 aa25.8■■□□□ 1.72
PDE6B-206ENST00000467152 WDR17Q8IZU2 1322 aa25.8■■□□□ 1.72
PDE6B-206ENST00000467152 NFAT5O94916 1531 aa25.79■■□□□ 1.72
PDE6B-206ENST00000467152 KCNH5Q8NCM2 988 aa25.79■■□□□ 1.72
PDE6B-206ENST00000467152 POLR3GLQ9BT43 218 aa25.79■■□□□ 1.72
PDE6B-206ENST00000467152 TOM1L2Q6ZVM7 507 aa25.78■■□□□ 1.72
PDE6B-206ENST00000467152 CARD14Q9BXL6 1004 aa25.78■■□□□ 1.72
PDE6B-206ENST00000467152 DDB1Q16531 1140 aa25.77■■□□□ 1.72
PDE6B-206ENST00000467152 ARHGEF25Q86VW2 580 aa25.77■■□□□ 1.72
PDE6B-206ENST00000467152 CDCA7Q9BWT1 371 aaPredicted RBP25.77■■□□□ 1.72
PDE6B-206ENST00000467152 BCL9O00512 1426 aa25.77■■□□□ 1.72
PDE6B-206ENST00000467152 SOX12O15370 315 aa25.75■■□□□ 1.71
PDE6B-206ENST00000467152 LTN1O94822 1766 aa25.74■■□□□ 1.71
PDE6B-206ENST00000467152 CASZ1Q86V15 1759 aa25.74■■□□□ 1.71
PDE6B-206ENST00000467152 FYB1O15117 783 aa25.73■■□□□ 1.71
PDE6B-206ENST00000467152 PLSCR1O15162 318 aa25.72■■□□□ 1.71
PDE6B-206ENST00000467152 MYOM1P52179 1685 aa25.71■■□□□ 1.71
PDE6B-206ENST00000467152 AXIN2Q9Y2T1 843 aa25.71■■□□□ 1.71
PDE6B-206ENST00000467152 COG3Q96JB2 828 aa25.7■■□□□ 1.7
PDE6B-206ENST00000467152 CARD10Q9BWT7 1032 aa25.7■■□□□ 1.7
PDE6B-206ENST00000467152 BCL11BQ9C0K0 894 aaPredicted RBP25.7■■□□□ 1.7
PDE6B-206ENST00000467152 CCDC7Q96M83 1385 aa25.69■■□□□ 1.7
PDE6B-206ENST00000467152 NHSQ6T4R5 1651 aa25.69■■□□□ 1.7
PDE6B-206ENST00000467152 SPON1Q9HCB6 807 aa25.69■■□□□ 1.7
PDE6B-206ENST00000467152 GGNBP2Q9H3C7 697 aa25.68■■□□□ 1.7
PDE6B-206ENST00000467152 TNS2Q63HR2 1409 aa25.67■■□□□ 1.7
PDE6B-206ENST00000467152 PANK3Q9H999 370 aa25.67■■□□□ 1.7
PDE6B-206ENST00000467152 KIF7Q2M1P5 1343 aa25.66■■□□□ 1.7
PDE6B-206ENST00000467152 NSD3Q9BZ95 1437 aa25.65■■□□□ 1.7
PDE6B-206ENST00000467152 KCNQ2O43526 872 aa25.65■■□□□ 1.7
PDE6B-206ENST00000467152 CSB-PGBD3P0DP91 1061 aa25.65■■□□□ 1.7
PDE6B-206ENST00000467152 MARCH10Q8NA82 808 aaPredicted RBP25.65■■□□□ 1.7
PDE6B-206ENST00000467152 FBLN1P23142 703 aa25.64■■□□□ 1.7
PDE6B-206ENST00000467152 FAM208AQ9UK61 1670 aaKnown RBP25.64■■□□□ 1.69
PDE6B-206ENST00000467152 PPP1R1BQ9UD71 204 aaPredicted RBP25.63■■□□□ 1.69
PDE6B-206ENST00000467152 EXOC5O00471 708 aa25.59■■□□□ 1.69
PDE6B-206ENST00000467152 ANO8Q9HCE9 1232 aaPredicted RBP25.59■■□□□ 1.69
PDE6B-206ENST00000467152 CGNL1Q0VF96 1302 aa25.59■■□□□ 1.69
PDE6B-206ENST00000467152 ERBB3P21860 1342 aa25.58■■□□□ 1.69
PDE6B-206ENST00000467152 BTAF1O14981 1849 aa25.58■■□□□ 1.68
PDE6B-206ENST00000467152 PTF1AQ7RTS3 328 aa25.57■■□□□ 1.68
PDE6B-206ENST00000467152 IP6K1Q92551 441 aa25.57■■□□□ 1.68
PDE6B-206ENST00000467152 MAP3K19Q56UN5 1328 aa25.57■■□□□ 1.68
PDE6B-206ENST00000467152 WASHC2AQ641Q2 1341 aa25.56■■□□□ 1.68
PDE6B-206ENST00000467152 KAT6BQ8WYB5 2073 aa25.55■■□□□ 1.68
PDE6B-206ENST00000467152 DCAF8L1A6NGE4 600 aa25.54■■□□□ 1.68
PDE6B-206ENST00000467152 PAPPAQ13219 1627 aa25.54■■□□□ 1.68
PDE6B-206ENST00000467152 RRS1Q15050 365 aaKnown RBP25.53■■□□□ 1.68
PDE6B-206ENST00000467152 PROM2Q8N271 834 aa25.53■■□□□ 1.68
PDE6B-206ENST00000467152 KIF20BQ96Q89 1820 aa25.53■■□□□ 1.68
PDE6B-206ENST00000467152 AMPHP49418 695 aa25.52■■□□□ 1.68
PDE6B-206ENST00000467152 HOXC9P31274 260 aa25.51■■□□□ 1.67
PDE6B-206ENST00000467152 TXNRD1Q16881 649 aa25.51■■□□□ 1.67
PDE6B-206ENST00000467152 ANKRD24Q8TF21 1146 aa25.51■■□□□ 1.67
PDE6B-206ENST00000467152 STK32BQ9NY57 414 aa25.51■■□□□ 1.67
PDE6B-206ENST00000467152 YY1P25490 414 aa25.5■■□□□ 1.67
PDE6B-206ENST00000467152 QSER1Q2KHR3 1735 aa25.5■■□□□ 1.67
PDE6B-206ENST00000467152 KNSTRNQ9Y448 316 aa25.5■■□□□ 1.67
PDE6B-206ENST00000467152 IL2RBP14784 551 aa25.49■■□□□ 1.67
PDE6B-206ENST00000467152 NLRP2Q9NX02 1062 aa25.49■■□□□ 1.67
PDE6B-206ENST00000467152 PER1O15534 1290 aaPredicted RBP25.48■■□□□ 1.67
PDE6B-206ENST00000467152 SLC15A2Q16348 729 aa25.47■■□□□ 1.67
PDE6B-206ENST00000467152 AMER1Q5JTC6 1135 aaPredicted RBP25.46■■□□□ 1.67
PDE6B-206ENST00000467152 LTV1Q96GA3 475 aaPredicted RBP25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms