RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 MARCH10Q8NA82 808 aaPredicted RBP19.26■□□□□ 0.67
UBR4-210ENST00000466969 PRAM1Q96QH2 718 aa19.26■□□□□ 0.67
UBR4-210ENST00000466969 CRB1P82279 1406 aa19.25■□□□□ 0.67
UBR4-210ENST00000466969 EIF3AQ14152 1382 aaKnown RBP19.24■□□□□ 0.67
UBR4-210ENST00000466969 ANKRD30BQ9BXX2 1392 aa19.24■□□□□ 0.67
UBR4-210ENST00000466969 WDR90Q96KV7 1748 aa19.24■□□□□ 0.67
UBR4-210ENST00000466969 ZNF827Q17R98 1081 aa19.23■□□□□ 0.67
UBR4-210ENST00000466969 POGKQ9P215 609 aa19.23■□□□□ 0.67
UBR4-210ENST00000466969 COL5A2P05997 1499 aaPredicted RBP19.22■□□□□ 0.67
UBR4-210ENST00000466969 CPDO75976 1380 aa19.21■□□□□ 0.67
UBR4-210ENST00000466969 LMO7Q8WWI1 1683 aa19.21■□□□□ 0.67
UBR4-210ENST00000466969 AKAP12Q02952 1782 aa19.2■□□□□ 0.66
UBR4-210ENST00000466969 HTRA3P83110 453 aa19.2■□□□□ 0.66
UBR4-210ENST00000466969 PAPPAQ13219 1627 aa19.2■□□□□ 0.66
UBR4-210ENST00000466969 CDCA7Q9BWT1 371 aaPredicted RBP19.19■□□□□ 0.66
UBR4-210ENST00000466969 PRR36Q9H6K5 1346 aa19.19■□□□□ 0.66
UBR4-210ENST00000466969 RGL3Q3MIN7 710 aa19.18■□□□□ 0.66
UBR4-210ENST00000466969 TOM1L2Q6ZVM7 507 aa19.18■□□□□ 0.66
UBR4-210ENST00000466969 COL24A1Q17RW2 1714 aa19.17■□□□□ 0.66
UBR4-210ENST00000466969 HIRIP3Q9BW71 556 aaPredicted RBP19.17■□□□□ 0.66
UBR4-210ENST00000466969 PIK3C2GO75747 1445 aa19.17■□□□□ 0.66
UBR4-210ENST00000466969 ITGAEP38570 1179 aa19.16■□□□□ 0.66
UBR4-210ENST00000466969 TULP4Q9NRJ4 1543 aa19.15■□□□□ 0.66
UBR4-210ENST00000466969 AKT1S1Q96B36 256 aa19.14■□□□□ 0.65
UBR4-210ENST00000466969 PNPLA7Q6ZV29 1317 aa19.14■□□□□ 0.65
UBR4-210ENST00000466969 ZBTB7CA1YPR0 619 aa19.13■□□□□ 0.65
UBR4-210ENST00000466969 EXOC5O00471 708 aa19.13■□□□□ 0.65
UBR4-210ENST00000466969 HSPA1AP0DMV8 641 aaKnown RBP19.13■□□□□ 0.65
UBR4-210ENST00000466969 HSPA1BP0DMV9 641 aaKnown RBP19.13■□□□□ 0.65
UBR4-210ENST00000466969 TFCP2L1Q9NZI6 479 aa19.13■□□□□ 0.65
UBR4-210ENST00000466969 ARHGEF28Q8N1W1 1705 aaKnown RBP19.12■□□□□ 0.65
UBR4-210ENST00000466969 ABTB2Q8N961 1025 aa19.12■□□□□ 0.65
UBR4-210ENST00000466969 BRD4O60885 1362 aaPredicted RBP19.11■□□□□ 0.65
UBR4-210ENST00000466969 ACSBG1Q96GR2 724 aa19.11■□□□□ 0.65
UBR4-210ENST00000466969 C14orf93Q9H972 538 aaKnown RBP19.11■□□□□ 0.65
UBR4-210ENST00000466969 LRRC4BQ9NT99 713 aa19.11■□□□□ 0.65
UBR4-210ENST00000466969 QSER1Q2KHR3 1735 aa19.11■□□□□ 0.65
UBR4-210ENST00000466969 MINK1Q8N4C8 1332 aaPredicted RBP19.1■□□□□ 0.65
UBR4-210ENST00000466969 WASLO00401 505 aaPredicted RBP19.1■□□□□ 0.65
UBR4-210ENST00000466969 C16orf71Q8IYS4 520 aaPredicted RBP19.1■□□□□ 0.65
UBR4-210ENST00000466969 RBM46Q8TBY0 533 aaKnown RBP19.1■□□□□ 0.65
UBR4-210ENST00000466969 CD2APQ9Y5K6 639 aa19.1■□□□□ 0.65
UBR4-210ENST00000466969 GCP02774 474 aa19.09■□□□□ 0.65
UBR4-210ENST00000466969 NHSQ6T4R5 1651 aa19.08■□□□□ 0.64
UBR4-210ENST00000466969 USP19O94966 1318 aa19.07■□□□□ 0.64
UBR4-210ENST00000466969 MSH5O43196 834 aa19.07■□□□□ 0.64
UBR4-210ENST00000466969 FSTL1Q12841 308 aa19.07■□□□□ 0.64
UBR4-210ENST00000466969 NLRP13Q86W25 1043 aa19.07■□□□□ 0.64
UBR4-210ENST00000466969 WNK3Q9BYP7 1800 aa19.07■□□□□ 0.64
UBR4-210ENST00000466969 SLC27A3Q5K4L6 730 aa19.06■□□□□ 0.64
UBR4-210ENST00000466969 CFAP70Q5T0N1 1121 aa19.06■□□□□ 0.64
UBR4-210ENST00000466969 FAM161AQ3B820 660 aa19.05■□□□□ 0.64
UBR4-210ENST00000466969 USP6P35125 1406 aa19.05■□□□□ 0.64
UBR4-210ENST00000466969 WDR17Q8IZU2 1322 aa19.04■□□□□ 0.64
UBR4-210ENST00000466969 NMRK2Q9NPI5 230 aa19.04■□□□□ 0.64
UBR4-210ENST00000466969 ITSN1Q15811 1721 aa19.03■□□□□ 0.64
UBR4-210ENST00000466969 TNS2Q63HR2 1409 aa19.02■□□□□ 0.64
UBR4-210ENST00000466969 NUDT16Q96DE0 195 aaKnown RBP19.02■□□□□ 0.64
UBR4-210ENST00000466969 SLC4A1APQ9BWU0 796 aaKnown RBP19.02■□□□□ 0.64
UBR4-210ENST00000466969 BTAF1O14981 1849 aa19.01■□□□□ 0.63
UBR4-210ENST00000466969 SPATA31E1Q6ZUB1 1445 aa19■□□□□ 0.63
UBR4-210ENST00000466969 MSL1Q68DK7 614 aa19■□□□□ 0.63
UBR4-210ENST00000466969 TRAK1Q9UPV9 953 aa19■□□□□ 0.63
UBR4-210ENST00000466969 ACEP12821 1306 aa19■□□□□ 0.63
UBR4-210ENST00000466969 IGSF1Q8N6C5 1336 aa19■□□□□ 0.63
UBR4-210ENST00000466969 KAT6BQ8WYB5 2073 aa18.99■□□□□ 0.63
UBR4-210ENST00000466969 CSB-PGBD3P0DP91 1061 aa18.99■□□□□ 0.63
UBR4-210ENST00000466969 CARD10Q9BWT7 1032 aa18.99■□□□□ 0.63
UBR4-210ENST00000466969 TUBGCP6Q96RT7 1819 aa18.98■□□□□ 0.63
UBR4-210ENST00000466969 POLR3AO14802 1390 aaPredicted RBP18.96■□□□□ 0.63
UBR4-210ENST00000466969 COL23A1Q86Y22 540 aaPredicted RBP18.94■□□□□ 0.62
UBR4-210ENST00000466969 AXIN2Q9Y2T1 843 aa18.94■□□□□ 0.62
UBR4-210ENST00000466969 TRPM1Q7Z4N2 1603 aa18.93■□□□□ 0.62
UBR4-210ENST00000466969 KCNQ4P56696 695 aa18.93■□□□□ 0.62
UBR4-210ENST00000466969 CCDC7Q96M83 1385 aa18.93■□□□□ 0.62
UBR4-210ENST00000466969 LOC105371045A0A1W2PR82 267 aa18.91■□□□□ 0.62
UBR4-210ENST00000466969 MLLT1Q03111 559 aaPredicted RBP18.9■□□□□ 0.62
UBR4-210ENST00000466969 SMC1BQ8NDV3 1235 aa18.9■□□□□ 0.62
UBR4-210ENST00000466969 CCDC61Q9Y6R9 512 aa18.9■□□□□ 0.62
UBR4-210ENST00000466969 ABCC6O95255 1503 aa18.9■□□□□ 0.62
UBR4-210ENST00000466969 CICQ96RK0 1608 aaPredicted RBP18.89■□□□□ 0.62
UBR4-210ENST00000466969 NLRP6P59044 892 aa18.89■□□□□ 0.61
UBR4-210ENST00000466969 PPIP5K1Q6PFW1 1433 aa18.89■□□□□ 0.61
UBR4-210ENST00000466969 PLEKHG3A1L390 1219 aa18.88■□□□□ 0.61
UBR4-210ENST00000466969 COL18A1P39060 1754 aa18.87■□□□□ 0.61
UBR4-210ENST00000466969 PRDM10Q9NQV6 1147 aa18.87■□□□□ 0.61
UBR4-210ENST00000466969 KDM2BQ8NHM5 1336 aa18.86■□□□□ 0.61
UBR4-210ENST00000466969 CDK19Q9BWU1 502 aa18.86■□□□□ 0.61
UBR4-210ENST00000466969 PIK3C2AO00443 1686 aa18.85■□□□□ 0.61
UBR4-210ENST00000466969 CCNL1Q9UK58 526 aaPredicted RBP18.84■□□□□ 0.61
UBR4-210ENST00000466969 CPSF1Q10570 1443 aaKnown RBP18.83■□□□□ 0.61
UBR4-210ENST00000466969 ARHGAP27Q6ZUM4 889 aa18.83■□□□□ 0.6
UBR4-210ENST00000466969 FLAD1Q8NFF5 587 aa18.83■□□□□ 0.6
UBR4-210ENST00000466969 SYTL4Q96C24 671 aaPredicted RBP18.83■□□□□ 0.6
UBR4-210ENST00000466969 SLIT3O75094 1523 aa18.83■□□□□ 0.6
UBR4-210ENST00000466969 PLEKHG2Q9H7P9 1386 aa18.82■□□□□ 0.6
UBR4-210ENST00000466969 ADGRB1O14514 1584 aa18.82■□□□□ 0.6
UBR4-210ENST00000466969 RRAGCQ9HB90 399 aa18.82■□□□□ 0.6
UBR4-210ENST00000466969 IL2RBP14784 551 aa18.81■□□□□ 0.6
UBR4-210ENST00000466969 ABHD8Q96I13 439 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms