RNA–Protein interactions for RNA: ENST00000466763.5

UBA3-209, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-209ENST00000466763 TNNT2P45379 298 aaPredicted RBP19■□□□□ 0.63
UBA3-209ENST00000466763 NWD2Q9ULI1 1742 aa19■□□□□ 0.63
UBA3-209ENST00000466763 NFAT5O94916 1531 aa19■□□□□ 0.63
UBA3-209ENST00000466763 RBM6P78332 1123 aaKnown RBP18.99■□□□□ 0.63
UBA3-209ENST00000466763 AATKQ6ZMQ8 1374 aa18.98■□□□□ 0.63
UBA3-209ENST00000466763 AMPHP49418 695 aa18.98■□□□□ 0.63
UBA3-209ENST00000466763 RRS1Q15050 365 aaKnown RBP18.98■□□□□ 0.63
UBA3-209ENST00000466763 MORC1Q86VD1 984 aa18.98■□□□□ 0.63
UBA3-209ENST00000466763 ATRNO75882 1429 aa18.98■□□□□ 0.63
UBA3-209ENST00000466763 CSB-PGBD3P0DP91 1061 aa18.97■□□□□ 0.63
UBA3-209ENST00000466763 VPS72Q15906 364 aa18.97■□□□□ 0.63
UBA3-209ENST00000466763 ILDR2Q71H61 639 aa18.97■□□□□ 0.63
UBA3-209ENST00000466763 GJD4Q96KN9 370 aaPredicted RBP18.97■□□□□ 0.63
UBA3-209ENST00000466763 AXIN2Q9Y2T1 843 aa18.97■□□□□ 0.63
UBA3-209ENST00000466763 LTN1O94822 1766 aa18.96■□□□□ 0.63
UBA3-209ENST00000466763 CAMTA1Q9Y6Y1 1673 aa18.96■□□□□ 0.63
UBA3-209ENST00000466763 CC2D1BQ5T0F9 858 aaKnown RBP18.96■□□□□ 0.63
UBA3-209ENST00000466763 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.96■□□□□ 0.63
UBA3-209ENST00000466763 MAP3K19Q56UN5 1328 aa18.96■□□□□ 0.63
UBA3-209ENST00000466763 PPM1GO15355 546 aaPredicted RBP18.95■□□□□ 0.62
UBA3-209ENST00000466763 PER1O15534 1290 aaPredicted RBP18.95■□□□□ 0.62
UBA3-209ENST00000466763 DDX10Q13206 875 aaKnown RBP18.95■□□□□ 0.62
UBA3-209ENST00000466763 NCBP3Q53F19 620 aaKnown RBP18.95■□□□□ 0.62
UBA3-209ENST00000466763 USP35Q9P2H5 1018 aa18.95■□□□□ 0.62
UBA3-209ENST00000466763 RGPD5Q99666 1765 aa18.95■□□□□ 0.62
UBA3-209ENST00000466763 NSD2O96028 1365 aa18.94■□□□□ 0.62
UBA3-209ENST00000466763 NRAPQ86VF7 1730 aa18.94■□□□□ 0.62
UBA3-209ENST00000466763 A0A0G2JS52 829 aa18.94■□□□□ 0.62
UBA3-209ENST00000466763 MYT1Q01538 1121 aa18.94■□□□□ 0.62
UBA3-209ENST00000466763 AMER1Q5JTC6 1135 aaPredicted RBP18.94■□□□□ 0.62
UBA3-209ENST00000466763 LARP1Q6PKG0 1096 aaKnown RBP18.94■□□□□ 0.62
UBA3-209ENST00000466763 LTV1Q96GA3 475 aaPredicted RBP18.94■□□□□ 0.62
UBA3-209ENST00000466763 LMO7Q8WWI1 1683 aa18.93■□□□□ 0.62
UBA3-209ENST00000466763 TOM1L2Q6ZVM7 507 aa18.93■□□□□ 0.62
UBA3-209ENST00000466763 COL18A1P39060 1754 aa18.93■□□□□ 0.62
UBA3-209ENST00000466763 ANKRD26Q9UPS8 1709 aa18.92■□□□□ 0.62
UBA3-209ENST00000466763 ZNF316A6NFI3 1004 aaPredicted RBP18.92■□□□□ 0.62
UBA3-209ENST00000466763 IP6K1Q92551 441 aa18.92■□□□□ 0.62
UBA3-209ENST00000466763 COL5A2P05997 1499 aaPredicted RBP18.91■□□□□ 0.62
UBA3-209ENST00000466763 HOXC9P31274 260 aa18.91■□□□□ 0.62
UBA3-209ENST00000466763 EMILIN1Q9Y6C2 1016 aa18.91■□□□□ 0.62
UBA3-209ENST00000466763 SPATA31A5Q5VU36 1347 aa18.91■□□□□ 0.62
UBA3-209ENST00000466763 SPATA31A7Q8IWB4 1347 aa18.91■□□□□ 0.62
UBA3-209ENST00000466763 FAM98CQ17RN3 349 aaKnown RBP18.9■□□□□ 0.62
UBA3-209ENST00000466763 ANKRD24Q8TF21 1146 aa18.9■□□□□ 0.62
UBA3-209ENST00000466763 MAP2P11137 1827 aaKnown RBP18.9■□□□□ 0.62
UBA3-209ENST00000466763 NLRP2Q9NX02 1062 aa18.89■□□□□ 0.61
UBA3-209ENST00000466763 WDR17Q8IZU2 1322 aa18.89■□□□□ 0.61
UBA3-209ENST00000466763 POLKQ9UBT6 870 aa18.88■□□□□ 0.61
UBA3-209ENST00000466763 SPATA31A1Q5TZJ5 1347 aa18.88■□□□□ 0.61
UBA3-209ENST00000466763 GLI3P10071 1580 aa18.88■□□□□ 0.61
UBA3-209ENST00000466763 ABCC6O95255 1503 aa18.86■□□□□ 0.61
UBA3-209ENST00000466763 BLMP54132 1417 aaPredicted RBP18.86■□□□□ 0.61
UBA3-209ENST00000466763 CRB1P82279 1406 aa18.86■□□□□ 0.61
UBA3-209ENST00000466763 RTL1A6NKG5 1358 aa18.86■□□□□ 0.61
UBA3-209ENST00000466763 HSP90AB2PQ58FF8 381 aa18.86■□□□□ 0.61
UBA3-209ENST00000466763 TCP11L2Q8N4U5 519 aa18.86■□□□□ 0.61
UBA3-209ENST00000466763 RGS12O14924 1447 aa18.85■□□□□ 0.61
UBA3-209ENST00000466763 FLT4P35916 1363 aa18.85■□□□□ 0.61
UBA3-209ENST00000466763 ERBB3P21860 1342 aa18.85■□□□□ 0.61
UBA3-209ENST00000466763 SEPT12Q8IYM1 358 aa18.85■□□□□ 0.61
UBA3-209ENST00000466763 CARD10Q9BWT7 1032 aa18.84■□□□□ 0.61
UBA3-209ENST00000466763 NPC1L1Q9UHC9 1359 aa18.83■□□□□ 0.61
UBA3-209ENST00000466763 CDK12Q9NYV4 1490 aaPredicted RBP18.83■□□□□ 0.6
UBA3-209ENST00000466763 PEAK1Q9H792 1746 aa18.83■□□□□ 0.6
UBA3-209ENST00000466763 SMG6Q86US8 1419 aaKnown RBP18.83■□□□□ 0.6
UBA3-209ENST00000466763 THRAP3Q9Y2W1 955 aaKnown RBP18.82■□□□□ 0.6
UBA3-209ENST00000466763 INSRP06213 1382 aa18.81■□□□□ 0.6
UBA3-209ENST00000466763 KIF24Q5T7B8 1368 aa18.81■□□□□ 0.6
UBA3-209ENST00000466763 ONECUT3O60422 494 aaPredicted RBP18.8■□□□□ 0.6
UBA3-209ENST00000466763 BARGINQ6ZT62 677 aa18.8■□□□□ 0.6
UBA3-209ENST00000466763 MTHFSP49914 203 aa18.79■□□□□ 0.6
UBA3-209ENST00000466763 USHBP1Q8N6Y0 703 aa18.79■□□□□ 0.6
UBA3-209ENST00000466763 RGPD2P0DJD1 1756 aa18.78■□□□□ 0.6
UBA3-209ENST00000466763 NBPF6Q5VWK0 638 aa18.77■□□□□ 0.6
UBA3-209ENST00000466763 NBPF4Q96M43 638 aa18.77■□□□□ 0.6
UBA3-209ENST00000466763 BRWD3Q6RI45 1802 aa18.77■□□□□ 0.59
UBA3-209ENST00000466763 PDE3BQ13370 1112 aa18.76■□□□□ 0.59
UBA3-209ENST00000466763 EIF4A2Q14240 407 aaKnown RBP18.76■□□□□ 0.59
UBA3-209ENST00000466763 KRT27Q7Z3Y8 459 aa18.76■□□□□ 0.59
UBA3-209ENST00000466763 FAM208AQ9UK61 1670 aaKnown RBP18.75■□□□□ 0.59
UBA3-209ENST00000466763 IL2RBP14784 551 aa18.74■□□□□ 0.59
UBA3-209ENST00000466763 DDB1Q16531 1140 aa18.74■□□□□ 0.59
UBA3-209ENST00000466763 CDCA7Q9BWT1 371 aaPredicted RBP18.74■□□□□ 0.59
UBA3-209ENST00000466763 EXOC5O00471 708 aa18.73■□□□□ 0.59
UBA3-209ENST00000466763 PPP2R1AP30153 589 aa18.73■□□□□ 0.59
UBA3-209ENST00000466763 FAM182BQ5T319 152 aa18.73■□□□□ 0.59
UBA3-209ENST00000466763 EYA1Q99502 592 aa18.73■□□□□ 0.59
UBA3-209ENST00000466763 THSD7AQ9UPZ6 1657 aa18.73■□□□□ 0.59
UBA3-209ENST00000466763 RAPGEF4Q8WZA2 1011 aa18.72■□□□□ 0.59
UBA3-209ENST00000466763 CFAP53Q96M91 514 aa18.71■□□□□ 0.59
UBA3-209ENST00000466763 SOCS7O14512 581 aa18.7■□□□□ 0.58
UBA3-209ENST00000466763 TATP17735 454 aaPredicted RBP18.7■□□□□ 0.58
UBA3-209ENST00000466763 RALBP1Q15311 655 aa18.7■□□□□ 0.58
UBA3-209ENST00000466763 WNK3Q9BYP7 1800 aa18.7■□□□□ 0.58
UBA3-209ENST00000466763 PARD3Q8TEW0 1356 aa18.69■□□□□ 0.58
UBA3-209ENST00000466763 DIAPH1O60610 1272 aaKnown RBP18.69■□□□□ 0.58
UBA3-209ENST00000466763 PARP4Q9UKK3 1724 aaKnown RBP18.69■□□□□ 0.58
UBA3-209ENST00000466763 DISP2A7MBM2 1401 aa18.68■□□□□ 0.58
UBA3-209ENST00000466763 U2SURPO15042 1029 aaKnown RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms