RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 AATKQ6ZMQ8 1374 aa21.89■■□□□ 1.1
HMGXB4-206ENST00000466438 MPHOSPH9Q99550 1183 aa21.89■■□□□ 1.09
HMGXB4-206ENST00000466438 ABTB2Q8N961 1025 aa21.88■■□□□ 1.09
HMGXB4-206ENST00000466438 GCP02774 474 aa21.86■■□□□ 1.09
HMGXB4-206ENST00000466438 MARCH10Q8NA82 808 aaPredicted RBP21.86■■□□□ 1.09
HMGXB4-206ENST00000466438 AKAP12Q02952 1782 aa21.86■■□□□ 1.09
HMGXB4-206ENST00000466438 TOPAZ1Q8N9V7 1692 aa21.85■■□□□ 1.09
HMGXB4-206ENST00000466438 ACEP12821 1306 aa21.85■■□□□ 1.09
HMGXB4-206ENST00000466438 WNK3Q9BYP7 1800 aa21.85■■□□□ 1.09
HMGXB4-206ENST00000466438 NLRP13Q86W25 1043 aa21.83■■□□□ 1.09
HMGXB4-206ENST00000466438 GOLGB1Q14789 3259 aaKnown RBP21.83■■□□□ 1.08
HMGXB4-206ENST00000466438 TOM1L2Q6ZVM7 507 aa21.81■■□□□ 1.08
HMGXB4-206ENST00000466438 CDCA7Q9BWT1 371 aaPredicted RBP21.81■■□□□ 1.08
HMGXB4-206ENST00000466438 PAPPAQ13219 1627 aa21.8■■□□□ 1.08
HMGXB4-206ENST00000466438 CCDC61Q9Y6R9 512 aa21.8■■□□□ 1.08
HMGXB4-206ENST00000466438 PLEKHG3A1L390 1219 aa21.79■■□□□ 1.08
HMGXB4-206ENST00000466438 ARHGEF28Q8N1W1 1705 aaKnown RBP21.79■■□□□ 1.08
HMGXB4-206ENST00000466438 PELP1Q8IZL8 1130 aaKnown RBP21.78■■□□□ 1.08
HMGXB4-206ENST00000466438 CDK19Q9BWU1 502 aa21.78■■□□□ 1.08
HMGXB4-206ENST00000466438 ZBTB7CA1YPR0 619 aa21.76■■□□□ 1.07
HMGXB4-206ENST00000466438 WDR17Q8IZU2 1322 aa21.76■■□□□ 1.07
HMGXB4-206ENST00000466438 KLHL34Q8N239 644 aa21.75■■□□□ 1.07
HMGXB4-206ENST00000466438 HSPA6P17066 643 aa21.74■■□□□ 1.07
HMGXB4-206ENST00000466438 NHSQ6T4R5 1651 aa21.74■■□□□ 1.07
HMGXB4-206ENST00000466438 SLIT3O75094 1523 aa21.73■■□□□ 1.07
HMGXB4-206ENST00000466438 COL18A1P39060 1754 aa21.73■■□□□ 1.07
HMGXB4-206ENST00000466438 POLD1P28340 1107 aa21.72■■□□□ 1.07
HMGXB4-206ENST00000466438 BRD4O60885 1362 aaPredicted RBP21.72■■□□□ 1.07
HMGXB4-206ENST00000466438 ATP10DQ9P241 1426 aa21.72■■□□□ 1.07
HMGXB4-206ENST00000466438 GRIN3BO60391 1043 aa21.71■■□□□ 1.07
HMGXB4-206ENST00000466438 ZNF827Q17R98 1081 aa21.71■■□□□ 1.07
HMGXB4-206ENST00000466438 SLC16A10Q8TF71 515 aa21.71■■□□□ 1.07
HMGXB4-206ENST00000466438 COL24A1Q17RW2 1714 aa21.71■■□□□ 1.07
HMGXB4-206ENST00000466438 EXOC5O00471 708 aa21.7■■□□□ 1.06
HMGXB4-206ENST00000466438 NLGN2Q8NFZ4 835 aa21.69■■□□□ 1.06
HMGXB4-206ENST00000466438 CARD10Q9BWT7 1032 aa21.69■■□□□ 1.06
HMGXB4-206ENST00000466438 AXIN2Q9Y2T1 843 aa21.69■■□□□ 1.06
HMGXB4-206ENST00000466438 TNS2Q63HR2 1409 aa21.69■■□□□ 1.06
HMGXB4-206ENST00000466438 QSER1Q2KHR3 1735 aa21.68■■□□□ 1.06
HMGXB4-206ENST00000466438 YBX3P16989 372 aaKnown RBP eCLIP21.67■■□□□ 1.06
HMGXB4-206ENST00000466438 NLRP6P59044 892 aa21.67■■□□□ 1.06
HMGXB4-206ENST00000466438 CPSF1Q10570 1443 aaKnown RBP21.66■■□□□ 1.06
HMGXB4-206ENST00000466438 PPIP5K1Q6PFW1 1433 aa21.66■■□□□ 1.06
HMGXB4-206ENST00000466438 GPBP1L1Q9HC44 474 aaPredicted RBP21.66■■□□□ 1.06
HMGXB4-206ENST00000466438 KDM2AQ9Y2K7 1162 aa21.66■■□□□ 1.06
HMGXB4-206ENST00000466438 DCAF11Q8TEB1 546 aa21.64■■□□□ 1.05
HMGXB4-206ENST00000466438 ACSBG1Q96GR2 724 aa21.64■■□□□ 1.05
HMGXB4-206ENST00000466438 STAC3Q96MF2 364 aa21.64■■□□□ 1.05
HMGXB4-206ENST00000466438 TRPM1Q7Z4N2 1603 aa21.64■■□□□ 1.05
HMGXB4-206ENST00000466438 ABCC6O95255 1503 aa21.64■■□□□ 1.05
HMGXB4-206ENST00000466438 BTAF1O14981 1849 aa21.64■■□□□ 1.05
HMGXB4-206ENST00000466438 USP6P35125 1406 aa21.63■■□□□ 1.05
HMGXB4-206ENST00000466438 CCDC7Q96M83 1385 aa21.63■■□□□ 1.05
HMGXB4-206ENST00000466438 AKT1S1Q96B36 256 aa21.63■■□□□ 1.05
HMGXB4-206ENST00000466438 LRRC4BQ9NT99 713 aa21.63■■□□□ 1.05
HMGXB4-206ENST00000466438 CSB-PGBD3P0DP91 1061 aa21.62■■□□□ 1.05
HMGXB4-206ENST00000466438 PNPLA7Q6ZV29 1317 aa21.61■■□□□ 1.05
HMGXB4-206ENST00000466438 ADCY9O60503 1353 aa21.61■■□□□ 1.05
HMGXB4-206ENST00000466438 ARHGEF25Q86VW2 580 aa21.6■■□□□ 1.05
HMGXB4-206ENST00000466438 RGPD5Q99666 1765 aa21.6■■□□□ 1.05
HMGXB4-206ENST00000466438 PIK3C2AO00443 1686 aa21.6■■□□□ 1.05
HMGXB4-206ENST00000466438 SRPK2P78362 688 aaKnown RBP21.58■■□□□ 1.05
HMGXB4-206ENST00000466438 SLC27A3Q5K4L6 730 aa21.57■■□□□ 1.04
HMGXB4-206ENST00000466438 TUBGCP6Q96RT7 1819 aa21.56■■□□□ 1.04
HMGXB4-206ENST00000466438 KCNH5Q8NCM2 988 aa21.55■■□□□ 1.04
HMGXB4-206ENST00000466438 ZNF526Q8TF50 670 aaPredicted RBP21.55■■□□□ 1.04
HMGXB4-206ENST00000466438 QRICH2Q9H0J4 1663 aa21.54■■□□□ 1.04
HMGXB4-206ENST00000466438 TFCP2L1Q9NZI6 479 aa21.54■■□□□ 1.04
HMGXB4-206ENST00000466438 CABP2Q9NPB3 220 aa21.52■■□□□ 1.04
HMGXB4-206ENST00000466438 APLP1P51693 650 aa21.51■■□□□ 1.03
HMGXB4-206ENST00000466438 CABP1Q9NZU7 370 aa21.51■■□□□ 1.03
HMGXB4-206ENST00000466438 NFAT5O94916 1531 aa21.5■■□□□ 1.03
HMGXB4-206ENST00000466438 SOX12O15370 315 aa21.48■■□□□ 1.03
HMGXB4-206ENST00000466438 IL2RBP14784 551 aa21.48■■□□□ 1.03
HMGXB4-206ENST00000466438 KIF3CO14782 793 aa21.47■■□□□ 1.03
HMGXB4-206ENST00000466438 KAT6BQ8WYB5 2073 aa21.47■■□□□ 1.03
HMGXB4-206ENST00000466438 KIAA1210Q9ULL0 1709 aa21.46■■□□□ 1.03
HMGXB4-206ENST00000466438 DNAJC5GQ8N7S2 189 aa21.46■■□□□ 1.03
HMGXB4-206ENST00000466438 CD2APQ9Y5K6 639 aa21.45■■□□□ 1.02
HMGXB4-206ENST00000466438 ERBB3P21860 1342 aa21.45■■□□□ 1.02
HMGXB4-206ENST00000466438 NLRP2Q9NX02 1062 aa21.44■■□□□ 1.02
HMGXB4-206ENST00000466438 TTC21BQ7Z4L5 1316 aa21.44■■□□□ 1.02
HMGXB4-206ENST00000466438 CENPJQ9HC77 1338 aaPredicted RBP21.44■■□□□ 1.02
HMGXB4-206ENST00000466438 KCNQ4P56696 695 aa21.43■■□□□ 1.02
HMGXB4-206ENST00000466438 MSH5O43196 834 aa21.42■■□□□ 1.02
HMGXB4-206ENST00000466438 LY75O60449 1722 aa21.42■■□□□ 1.02
HMGXB4-206ENST00000466438 TTC21AQ8NDW8 1320 aa21.41■■□□□ 1.02
HMGXB4-206ENST00000466438 COL23A1Q86Y22 540 aaPredicted RBP21.41■■□□□ 1.02
HMGXB4-206ENST00000466438 COL13A1Q5TAT6 717 aaPredicted RBP21.4■■□□□ 1.02
HMGXB4-206ENST00000466438 MSL1Q68DK7 614 aa21.4■■□□□ 1.02
HMGXB4-206ENST00000466438 PIAS4Q8N2W9 510 aaPredicted RBP21.4■■□□□ 1.02
HMGXB4-206ENST00000466438 CAPN15O75808 1086 aa21.39■■□□□ 1.01
HMGXB4-206ENST00000466438 ZNF692Q9BU19 519 aaPredicted RBP21.39■■□□□ 1.01
HMGXB4-206ENST00000466438 NBPF1Q3BBV0 1214 aa21.37■■□□□ 1.01
HMGXB4-206ENST00000466438 ANKRD36BQ8N2N9 1353 aa21.36■■□□□ 1.01
HMGXB4-206ENST00000466438 TOMM70O94826 608 aa21.36■■□□□ 1.01
HMGXB4-206ENST00000466438 SYTL4Q96C24 671 aaPredicted RBP21.36■■□□□ 1.01
HMGXB4-206ENST00000466438 CCNL1Q9UK58 526 aaPredicted RBP21.36■■□□□ 1.01
HMGXB4-206ENST00000466438 PRELPP51888 382 aa21.35■■□□□ 1.01
HMGXB4-206ENST00000466438 DDX54Q8TDD1 881 aaKnown RBP21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms