RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 MTHFSP49914 203 aa15.07■□□□□ 0
VCP-204ENST00000466100 ZC3H6P61129 1189 aaKnown RBP15.07■□□□□ 0
VCP-204ENST00000466100 BLMP54132 1417 aaPredicted RBP15.06■□□□□ 0
VCP-204ENST00000466100 HOXC9P31274 260 aa15.05■□□□□ -0
VCP-204ENST00000466100 CCDC184Q52MB2 194 aa15.05■□□□□ -0
VCP-204ENST00000466100 IP6K1Q92551 441 aa15.05■□□□□ -0
VCP-204ENST00000466100 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.05■□□□□ -0
VCP-204ENST00000466100 SLIT2O94813 1529 aa15.03■□□□□ -0
VCP-204ENST00000466100 COL5A2P05997 1499 aaPredicted RBP15.03■□□□□ -0
VCP-204ENST00000466100 CCER2I3L3R5 266 aa15.03■□□□□ -0
VCP-204ENST00000466100 HAP1P54257 671 aaPredicted RBP15.03■□□□□ -0
VCP-204ENST00000466100 CHRNA2Q15822 529 aa15.03■□□□□ -0
VCP-204ENST00000466100 HSP90AB2PQ58FF8 381 aa15.03■□□□□ -0
VCP-204ENST00000466100 PRDM11Q9NQV5 511 aa15.03■□□□□ -0
VCP-204ENST00000466100 AXIN2Q9Y2T1 843 aa15.03■□□□□ -0
VCP-204ENST00000466100 FAM83GA6ND36 823 aa15.02■□□□□ -0
VCP-204ENST00000466100 NUTM2BA6NNL0 878 aaPredicted RBP15.02■□□□□ -0
VCP-204ENST00000466100 NUTM2EB1AL46 878 aaPredicted RBP15.02■□□□□ -0
VCP-204ENST00000466100 AMPHP49418 695 aa15.02■□□□□ -0
VCP-204ENST00000466100 NUTM2AQ8IVF1 878 aaPredicted RBP15.02■□□□□ -0
VCP-204ENST00000466100 PPM1GO15355 546 aaPredicted RBP15.01□□□□□ -0.01
VCP-204ENST00000466100 ADAMTS2O95450 1211 aa15.01□□□□□ -0.01
VCP-204ENST00000466100 NCAPD2Q15021 1401 aa15□□□□□ -0.01
VCP-204ENST00000466100 WNK3Q9BYP7 1800 aa15□□□□□ -0.01
VCP-204ENST00000466100 ERBB3P21860 1342 aa14.99□□□□□ -0.01
VCP-204ENST00000466100 ZBTB7CA1YPR0 619 aa14.99□□□□□ -0.01
VCP-204ENST00000466100 IL13P35225 146 aa14.99□□□□□ -0.01
VCP-204ENST00000466100 EIF4A2Q14240 407 aaKnown RBP14.99□□□□□ -0.01
VCP-204ENST00000466100 CFAP53Q96M91 514 aa14.99□□□□□ -0.01
VCP-204ENST00000466100 MRS2Q9HD23 443 aa14.98□□□□□ -0.01
VCP-204ENST00000466100 BCL9LQ86UU0 1499 aa14.97□□□□□ -0.01
VCP-204ENST00000466100 DIAPH1O60610 1272 aaKnown RBP14.97□□□□□ -0.01
VCP-204ENST00000466100 ANKRD24Q8TF21 1146 aa14.97□□□□□ -0.01
VCP-204ENST00000466100 FNBP4Q8N3X1 1017 aaPredicted RBP14.96□□□□□ -0.01
VCP-204ENST00000466100 PNISRQ8TF01 805 aaKnown RBP14.96□□□□□ -0.01
VCP-204ENST00000466100 BTG4Q9NY30 223 aa14.96□□□□□ -0.01
VCP-204ENST00000466100 WDR17Q8IZU2 1322 aa14.95□□□□□ -0.02
VCP-204ENST00000466100 IGSF1Q8N6C5 1336 aa14.95□□□□□ -0.02
VCP-204ENST00000466100 ILDR1Q86SU0 546 aaPredicted RBP14.95□□□□□ -0.02
VCP-204ENST00000466100 C8orf37Q96NL8 207 aa14.94□□□□□ -0.02
VCP-204ENST00000466100 KDRP35968 1356 aa14.94□□□□□ -0.02
VCP-204ENST00000466100 LTV1Q96GA3 475 aaPredicted RBP14.93□□□□□ -0.02
VCP-204ENST00000466100 EYA1Q99502 592 aa14.93□□□□□ -0.02
VCP-204ENST00000466100 CRB1P82279 1406 aa14.92□□□□□ -0.02
VCP-204ENST00000466100 PARP4Q9UKK3 1724 aaKnown RBP14.92□□□□□ -0.02
VCP-204ENST00000466100 NBPF6Q5VWK0 638 aa14.92□□□□□ -0.02
VCP-204ENST00000466100 NBPF4Q96M43 638 aa14.92□□□□□ -0.02
VCP-204ENST00000466100 PKD1L3Q7Z443 1732 aa14.92□□□□□ -0.02
VCP-204ENST00000466100 AFF2P51816 1311 aa14.92□□□□□ -0.02
VCP-204ENST00000466100 GLI3P10071 1580 aa14.91□□□□□ -0.02
VCP-204ENST00000466100 MEX3CQ5U5Q3 659 aaKnown RBP14.91□□□□□ -0.02
VCP-204ENST00000466100 LARP1Q6PKG0 1096 aaKnown RBP14.91□□□□□ -0.02
VCP-204ENST00000466100 NGLY1Q96IV0 654 aa14.91□□□□□ -0.02
VCP-204ENST00000466100 SHANK3Q9BYB0 1731 aa14.91□□□□□ -0.02
VCP-204ENST00000466100 ATRNO75882 1429 aa14.91□□□□□ -0.02
VCP-204ENST00000466100 UNC5CLQ8IV45 518 aa14.9□□□□□ -0.02
VCP-204ENST00000466100 NUDCQ9Y266 331 aa14.9□□□□□ -0.02
VCP-204ENST00000466100 U2SURPO15042 1029 aaKnown RBP14.89□□□□□ -0.03
VCP-204ENST00000466100 AEBP1Q8IUX7 1158 aa14.89□□□□□ -0.03
VCP-204ENST00000466100 CARD10Q9BWT7 1032 aa14.89□□□□□ -0.03
VCP-204ENST00000466100 RSPH6AQ9H0K4 717 aa14.89□□□□□ -0.03
VCP-204ENST00000466100 STRN4Q9NRL3 753 aa14.89□□□□□ -0.03
VCP-204ENST00000466100 ADAMTS8Q9UP79 889 aa14.89□□□□□ -0.03
VCP-204ENST00000466100 DLG5Q8TDM6 1919 aa14.89□□□□□ -0.03
VCP-204ENST00000466100 DISP2A7MBM2 1401 aa14.89□□□□□ -0.03
VCP-204ENST00000466100 MEGF6O75095 1541 aa14.88□□□□□ -0.03
VCP-204ENST00000466100 THSD7AQ9UPZ6 1657 aa14.88□□□□□ -0.03
VCP-204ENST00000466100 U2AF1L5P0DN76 240 aaPredicted RBP14.88□□□□□ -0.03
VCP-204ENST00000466100 CSB-PGBD3P0DP91 1061 aa14.88□□□□□ -0.03
VCP-204ENST00000466100 U2AF1Q01081 240 aaKnown RBP eCLIP14.88□□□□□ -0.03
VCP-204ENST00000466100 WDR43Q15061 677 aaKnown RBP eCLIP14.88□□□□□ -0.03
VCP-204ENST00000466100 USHBP1Q8N6Y0 703 aa14.88□□□□□ -0.03
VCP-204ENST00000466100 SPATA31A1Q5TZJ5 1347 aa14.88□□□□□ -0.03
VCP-204ENST00000466100 SPATA31A5Q5VU36 1347 aa14.88□□□□□ -0.03
VCP-204ENST00000466100 SPATA31A7Q8IWB4 1347 aa14.88□□□□□ -0.03
VCP-204ENST00000466100 PLEKHG2Q9H7P9 1386 aa14.87□□□□□ -0.03
VCP-204ENST00000466100 EVA1CP58658 441 aa14.87□□□□□ -0.03
VCP-204ENST00000466100 VPS72Q15906 364 aa14.87□□□□□ -0.03
VCP-204ENST00000466100 SULT6B1Q6IMI4 303 aa14.87□□□□□ -0.03
VCP-204ENST00000466100 TOM1L2Q6ZVM7 507 aa14.87□□□□□ -0.03
VCP-204ENST00000466100 NLRP2Q9NX02 1062 aa14.87□□□□□ -0.03
VCP-204ENST00000466100 USP21Q9UK80 565 aa14.87□□□□□ -0.03
VCP-204ENST00000466100 LRRC37A3O60309 1634 aa14.87□□□□□ -0.03
VCP-204ENST00000466100 VIRMAQ69YN4 1812 aaKnown RBP14.87□□□□□ -0.03
VCP-204ENST00000466100 FCHSD2O94868 740 aa14.86□□□□□ -0.03
VCP-204ENST00000466100 HMOX1P09601 288 aa14.86□□□□□ -0.03
VCP-204ENST00000466100 OVOS2A0A0G2JMS6 1433 aa14.85□□□□□ -0.03
VCP-204ENST00000466100 FAM9BQ8IZU0 186 aa14.85□□□□□ -0.03
VCP-204ENST00000466100 PLEKHF1Q96S99 279 aa14.85□□□□□ -0.03
VCP-204ENST00000466100 EP400Q96L91 3159 aa14.83□□□□□ -0.04
VCP-204ENST00000466100 PRKAR2BP31323 418 aa14.83□□□□□ -0.04
VCP-204ENST00000466100 ADAMTS7Q9UKP4 1686 aa14.82□□□□□ -0.04
VCP-204ENST00000466100 TCP11L2Q8N4U5 519 aa14.82□□□□□ -0.04
VCP-204ENST00000466100 RGS17Q9UGC6 210 aaPredicted RBP14.82□□□□□ -0.04
VCP-204ENST00000466100 TRPC5Q9UL62 973 aaPredicted RBP14.82□□□□□ -0.04
VCP-204ENST00000466100 THRAP3Q9Y2W1 955 aaKnown RBP14.82□□□□□ -0.04
VCP-204ENST00000466100 BARGINQ6ZT62 677 aa14.81□□□□□ -0.04
VCP-204ENST00000466100 CCDC146Q8IYE0 955 aa14.81□□□□□ -0.04
VCP-204ENST00000466100 TNS2Q63HR2 1409 aa14.81□□□□□ -0.04
VCP-204ENST00000466100 BRWD3Q6RI45 1802 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms