RNA–Protein interactions for RNA: ENST00000466032.1

CHMP3-206, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 436 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-206ENST00000466032 ASXL1Q8IXJ9 1541 aa8.27□□□□□ -1.09
CHMP3-206ENST00000466032 KIF7Q2M1P5 1343 aa8.27□□□□□ -1.09
CHMP3-206ENST00000466032 ARHGEF28Q8N1W1 1705 aaKnown RBP8.26□□□□□ -1.09
CHMP3-206ENST00000466032 WNT2BQ93097 391 aa8.26□□□□□ -1.09
CHMP3-206ENST00000466032 SLC26A8Q96RN1 970 aa8.26□□□□□ -1.09
CHMP3-206ENST00000466032 SLC4A5Q9BY07 1137 aa8.26□□□□□ -1.09
CHMP3-206ENST00000466032 STK26Q9P289 416 aa8.26□□□□□ -1.09
CHMP3-206ENST00000466032 NKTRP30414 1462 aaKnown RBP8.26□□□□□ -1.09
CHMP3-206ENST00000466032 KTN1Q86UP2 1357 aaKnown RBP8.25□□□□□ -1.09
CHMP3-206ENST00000466032 NCKAP5LQ9HCH0 1330 aa8.25□□□□□ -1.09
CHMP3-206ENST00000466032 WIPF1O43516 503 aa8.24□□□□□ -1.09
CHMP3-206ENST00000466032 GSE1Q14687 1217 aa8.24□□□□□ -1.09
CHMP3-206ENST00000466032 HIRIP3Q9BW71 556 aaPredicted RBP8.24□□□□□ -1.09
CHMP3-206ENST00000466032 CHD2O14647 1828 aaKnown RBP8.24□□□□□ -1.09
CHMP3-206ENST00000466032 QRICH2Q9H0J4 1663 aa8.24□□□□□ -1.09
CHMP3-206ENST00000466032 XRN1Q8IZH2 1706 aaKnown RBP8.23□□□□□ -1.09
CHMP3-206ENST00000466032 POTECB2RU33 542 aa8.23□□□□□ -1.09
CHMP3-206ENST00000466032 WASLO00401 505 aaPredicted RBP8.23□□□□□ -1.09
CHMP3-206ENST00000466032 KIF3CO14782 793 aa8.23□□□□□ -1.09
CHMP3-206ENST00000466032 DDX10Q13206 875 aaKnown RBP8.23□□□□□ -1.09
CHMP3-206ENST00000466032 ADGRB2O60241 1585 aa8.22□□□□□ -1.09
CHMP3-206ENST00000466032 NWD1Q149M9 1564 aa8.22□□□□□ -1.09
CHMP3-206ENST00000466032 ANP32CO43423 234 aa8.22□□□□□ -1.09
CHMP3-206ENST00000466032 SRPK2P78362 688 aaKnown RBP8.22□□□□□ -1.09
CHMP3-206ENST00000466032 TERF2IPQ9NYB0 399 aa8.22□□□□□ -1.09
CHMP3-206ENST00000466032 ROBO2Q9HCK4 1378 aa8.22□□□□□ -1.09
CHMP3-206ENST00000466032 DISP3Q9P2K9 1392 aa8.22□□□□□ -1.09
CHMP3-206ENST00000466032 PTPRUQ92729 1446 aa8.21□□□□□ -1.09
CHMP3-206ENST00000466032 C11orf95C9JLR9 678 aaPredicted RBP8.21□□□□□ -1.1
CHMP3-206ENST00000466032 INSM1Q01101 510 aaPredicted RBP8.21□□□□□ -1.1
CHMP3-206ENST00000466032 KCNC4Q03721 635 aa8.21□□□□□ -1.1
CHMP3-206ENST00000466032 EFCAB3Q8N7B9 438 aa8.21□□□□□ -1.1
CHMP3-206ENST00000466032 CDK19Q9BWU1 502 aa8.21□□□□□ -1.1
CHMP3-206ENST00000466032 KNSTRNQ9Y448 316 aa8.21□□□□□ -1.1
CHMP3-206ENST00000466032 NPC1L1Q9UHC9 1359 aa8.21□□□□□ -1.1
CHMP3-206ENST00000466032 DCCP43146 1447 aa8.2□□□□□ -1.1
CHMP3-206ENST00000466032 ANKARQ7Z5J8 1434 aa8.2□□□□□ -1.1
CHMP3-206ENST00000466032 HSPA2P54652 639 aa8.2□□□□□ -1.1
CHMP3-206ENST00000466032 HDGFL2Q7Z4V5 671 aaPredicted RBP8.2□□□□□ -1.1
CHMP3-206ENST00000466032 WAPLQ7Z5K2 1190 aa8.2□□□□□ -1.1
CHMP3-206ENST00000466032 MINK1Q8N4C8 1332 aaPredicted RBP8.2□□□□□ -1.1
CHMP3-206ENST00000466032 BRD4O60885 1362 aaPredicted RBP8.2□□□□□ -1.1
CHMP3-206ENST00000466032 SAFB2Q14151 953 aaKnown RBP eCLIP8.19□□□□□ -1.1
CHMP3-206ENST00000466032 RALBP1Q15311 655 aa8.19□□□□□ -1.1
CHMP3-206ENST00000466032 PROSER2Q86WR7 435 aaPredicted RBP8.19□□□□□ -1.1
CHMP3-206ENST00000466032 POLR3GLQ9BT43 218 aa8.19□□□□□ -1.1
CHMP3-206ENST00000466032 C19orf44Q9H6X5 657 aa8.19□□□□□ -1.1
CHMP3-206ENST00000466032 NSD2O96028 1365 aa8.19□□□□□ -1.1
CHMP3-206ENST00000466032 ANKRD36BQ8N2N9 1353 aa8.19□□□□□ -1.1
CHMP3-206ENST00000466032 ADGRL3Q9HAR2 1447 aa8.19□□□□□ -1.1
CHMP3-206ENST00000466032 ATP7BP35670 1465 aa8.19□□□□□ -1.1
CHMP3-206ENST00000466032 TULP4Q9NRJ4 1543 aa8.19□□□□□ -1.1
CHMP3-206ENST00000466032 STRCQ7RTU9 1775 aa8.18□□□□□ -1.1
CHMP3-206ENST00000466032 CCER2I3L3R5 266 aa8.18□□□□□ -1.1
CHMP3-206ENST00000466032 NUDT16Q96DE0 195 aaKnown RBP8.18□□□□□ -1.1
CHMP3-206ENST00000466032 MS4A4AQ96JQ5 239 aa8.18□□□□□ -1.1
CHMP3-206ENST00000466032 PRKD2Q9BZL6 878 aa8.18□□□□□ -1.1
CHMP3-206ENST00000466032 V9GY48 417 aaPredicted RBP8.18□□□□□ -1.1
CHMP3-206ENST00000466032 CDC42BPGQ6DT37 1551 aa8.18□□□□□ -1.1
CHMP3-206ENST00000466032 PLEKHG3A1L390 1219 aa8.17□□□□□ -1.1
CHMP3-206ENST00000466032 C14orf37Q86TY3 774 aa8.17□□□□□ -1.1
CHMP3-206ENST00000466032 CADPS2Q86UW7 1296 aa8.17□□□□□ -1.1
CHMP3-206ENST00000466032 TMC1Q8TDI8 760 aa8.17□□□□□ -1.1
CHMP3-206ENST00000466032 PANK3Q9H999 370 aa8.17□□□□□ -1.1
CHMP3-206ENST00000466032 CGNL1Q0VF96 1302 aa8.17□□□□□ -1.1
CHMP3-206ENST00000466032 PLEKHH1Q9ULM0 1364 aa8.17□□□□□ -1.1
CHMP3-206ENST00000466032 GOLGA8CPA6NN73 597 aa8.16□□□□□ -1.1
CHMP3-206ENST00000466032 PER1O15534 1290 aaPredicted RBP8.16□□□□□ -1.1
CHMP3-206ENST00000466032 ATF3P18847 181 aa8.16□□□□□ -1.1
CHMP3-206ENST00000466032 MSH6P52701 1360 aa8.16□□□□□ -1.1
CHMP3-206ENST00000466032 PPP4R3BQ5MIZ7 849 aa8.15□□□□□ -1.1
CHMP3-206ENST00000466032 KRTAP4-8Q9BYQ9 185 aa8.15□□□□□ -1.1
CHMP3-206ENST00000466032 ITSN1Q15811 1721 aa8.15□□□□□ -1.11
CHMP3-206ENST00000466032 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.15□□□□□ -1.11
CHMP3-206ENST00000466032 EDC4Q6P2E9 1401 aaKnown RBP8.14□□□□□ -1.11
CHMP3-206ENST00000466032 PPIP5K1Q6PFW1 1433 aa8.14□□□□□ -1.11
CHMP3-206ENST00000466032 TMEM94Q12767 1356 aa8.14□□□□□ -1.11
CHMP3-206ENST00000466032 KCNK17Q96T54 332 aa8.14□□□□□ -1.11
CHMP3-206ENST00000466032 SLC12A5Q9H2X9 1139 aa8.14□□□□□ -1.11
CHMP3-206ENST00000466032 PRKRIP1Q9H875 184 aaPredicted RBP8.14□□□□□ -1.11
CHMP3-206ENST00000466032 CABP1Q9NZU7 370 aa8.14□□□□□ -1.11
CHMP3-206ENST00000466032 PDZRN3Q9UPQ7 1066 aa8.14□□□□□ -1.11
CHMP3-206ENST00000466032 USP32Q8NFA0 1604 aa8.14□□□□□ -1.11
CHMP3-206ENST00000466032 CPSF1Q10570 1443 aaKnown RBP8.13□□□□□ -1.11
CHMP3-206ENST00000466032 POLR3AO14802 1390 aaPredicted RBP8.13□□□□□ -1.11
CHMP3-206ENST00000466032 TTC21AQ8NDW8 1320 aa8.13□□□□□ -1.11
CHMP3-206ENST00000466032 MYOM1P52179 1685 aa8.13□□□□□ -1.11
CHMP3-206ENST00000466032 FMN2Q9NZ56 1722 aa8.12□□□□□ -1.11
CHMP3-206ENST00000466032 MYBBP1AQ9BQG0 1328 aaKnown RBP8.12□□□□□ -1.11
CHMP3-206ENST00000466032 WFS1O76024 890 aa8.12□□□□□ -1.11
CHMP3-206ENST00000466032 NYAP1Q6ZVC0 841 aa8.12□□□□□ -1.11
CHMP3-206ENST00000466032 MRPL50Q8N5N7 158 aaKnown RBP8.12□□□□□ -1.11
CHMP3-206ENST00000466032 NGDNQ8NEJ9 315 aaKnown RBP8.12□□□□□ -1.11
CHMP3-206ENST00000466032 A0A1W2PP64 1363 aa8.11□□□□□ -1.11
CHMP3-206ENST00000466032 PARD3Q8TEW0 1356 aa8.11□□□□□ -1.11
CHMP3-206ENST00000466032 PSME1Q06323 249 aa8.11□□□□□ -1.11
CHMP3-206ENST00000466032 AMER1Q5JTC6 1135 aaPredicted RBP8.11□□□□□ -1.11
CHMP3-206ENST00000466032 NLRP13Q86W25 1043 aa8.11□□□□□ -1.11
CHMP3-206ENST00000466032 PHF8Q9UPP1 1060 aa8.11□□□□□ -1.11
CHMP3-206ENST00000466032 LRRC7Q96NW7 1537 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms