RNA–Protein interactions for RNA: ENST00000465950.5

SCAF11-205, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 5,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-205ENST00000465950 BRMS1Q9HCU9 246 aa11.54□□□□□ -0.56
SCAF11-205ENST00000465950 TRIM6-TRIM34B2RNG4 842 aa11.54□□□□□ -0.56
SCAF11-205ENST00000465950 CSPP1Q1MSJ5 1256 aa11.54□□□□□ -0.56
SCAF11-205ENST00000465950 TRAPPC3LQ5T215 181 aa11.54□□□□□ -0.56
SCAF11-205ENST00000465950 SPTY2D1Q68D10 685 aaPredicted RBP11.54□□□□□ -0.56
SCAF11-205ENST00000465950 BTBD11A6QL63 1104 aa11.53□□□□□ -0.56
SCAF11-205ENST00000465950 IFIT1P09914 478 aaKnown RBP11.53□□□□□ -0.56
SCAF11-205ENST00000465950 IL27Q8NEV9 243 aa11.53□□□□□ -0.56
SCAF11-205ENST00000465950 ANKIB1Q9P2G1 1089 aa11.53□□□□□ -0.56
SCAF11-205ENST00000465950 BIVM-ERCC5R4GMW8 1640 aa11.53□□□□□ -0.56
SCAF11-205ENST00000465950 CCER2I3L3R5 266 aa11.53□□□□□ -0.56
SCAF11-205ENST00000465950 GNAT3A8MTJ3 354 aa11.53□□□□□ -0.56
SCAF11-205ENST00000465950 MAP3K9P80192 1104 aa11.53□□□□□ -0.56
SCAF11-205ENST00000465950 NBPF6Q5VWK0 638 aa11.53□□□□□ -0.56
SCAF11-205ENST00000465950 NBPF5PQ86XG9 351 aaPredicted RBP11.53□□□□□ -0.56
SCAF11-205ENST00000465950 NBPF4Q96M43 638 aa11.53□□□□□ -0.56
SCAF11-205ENST00000465950 CDK13Q14004 1512 aaKnown RBP11.53□□□□□ -0.56
SCAF11-205ENST00000465950 PRM3Q9NNZ6 103 aa11.52□□□□□ -0.56
SCAF11-205ENST00000465950 HIP1O00291 1037 aa11.52□□□□□ -0.56
SCAF11-205ENST00000465950 TPTE2Q6XPS3 522 aa11.52□□□□□ -0.56
SCAF11-205ENST00000465950 DIAPH3Q9NSV4 1193 aa11.52□□□□□ -0.56
SCAF11-205ENST00000465950 ITSN2Q9NZM3 1697 aa11.52□□□□□ -0.57
SCAF11-205ENST00000465950 SPATA31A6Q5VVP1 1343 aa11.52□□□□□ -0.57
SCAF11-205ENST00000465950 UBTFL1P0CB47 393 aaPredicted RBP11.52□□□□□ -0.57
SCAF11-205ENST00000465950 AAMPQ13685 434 aa11.52□□□□□ -0.57
SCAF11-205ENST00000465950 NLRP1Q9C000 1473 aa11.52□□□□□ -0.57
SCAF11-205ENST00000465950 GRIN3BO60391 1043 aa11.52□□□□□ -0.57
SCAF11-205ENST00000465950 TPM4P67936 248 aa11.52□□□□□ -0.57
SCAF11-205ENST00000465950 DNAJC2Q99543 621 aaKnown RBP11.52□□□□□ -0.57
SCAF11-205ENST00000465950 TAOK2Q9UL54 1235 aa11.52□□□□□ -0.57
SCAF11-205ENST00000465950 EHMT1Q9H9B1 1298 aa11.51□□□□□ -0.57
SCAF11-205ENST00000465950 AKAP2Q9Y2D5 859 aa11.51□□□□□ -0.57
SCAF11-205ENST00000465950 RUSC2Q8N2Y8 1516 aa11.51□□□□□ -0.57
SCAF11-205ENST00000465950 C6orf229H3BNL8 230 aa11.51□□□□□ -0.57
SCAF11-205ENST00000465950 ZGPATQ8N5A5 531 aaKnown RBP11.51□□□□□ -0.57
SCAF11-205ENST00000465950 TPM2P07951 284 aa11.51□□□□□ -0.57
SCAF11-205ENST00000465950 SSFA2P28290 1259 aa11.51□□□□□ -0.57
SCAF11-205ENST00000465950 CRACR2BQ8N4Y2 399 aaPredicted RBP11.51□□□□□ -0.57
SCAF11-205ENST00000465950 TMEM132AQ24JP5 1023 aa11.5□□□□□ -0.57
SCAF11-205ENST00000465950 HDGFL1Q5TGJ6 251 aa11.5□□□□□ -0.57
SCAF11-205ENST00000465950 ANKRD24Q8TF21 1146 aa11.5□□□□□ -0.57
SCAF11-205ENST00000465950 NAIPQ13075 1403 aa11.5□□□□□ -0.57
SCAF11-205ENST00000465950 GSTO1P78417 241 aa11.5□□□□□ -0.57
SCAF11-205ENST00000465950 ZKSCAN2Q63HK3 967 aa11.5□□□□□ -0.57
SCAF11-205ENST00000465950 KRT27Q7Z3Y8 459 aa11.5□□□□□ -0.57
SCAF11-205ENST00000465950 RALYLQ86SE5 291 aaKnown RBP11.5□□□□□ -0.57
SCAF11-205ENST00000465950 ARAP1Q96P48 1450 aa11.5□□□□□ -0.57
SCAF11-205ENST00000465950 PCDH11XQ9BZA7 1347 aa11.5□□□□□ -0.57
SCAF11-205ENST00000465950 PCDH11YQ9BZA8 1340 aa11.5□□□□□ -0.57
SCAF11-205ENST00000465950 KIAA0556O60303 1618 aa11.5□□□□□ -0.57
SCAF11-205ENST00000465950 TNIP1Q15025 636 aa11.5□□□□□ -0.57
SCAF11-205ENST00000465950 NEUROD6Q96NK8 337 aa11.5□□□□□ -0.57
SCAF11-205ENST00000465950 NSD2O96028 1365 aa11.49□□□□□ -0.57
SCAF11-205ENST00000465950 H0YIN7 160 aa11.49□□□□□ -0.57
SCAF11-205ENST00000465950 ZKSCAN1P17029 563 aaPredicted RBP11.49□□□□□ -0.57
SCAF11-205ENST00000465950 ATP6V1AP38606 617 aa11.49□□□□□ -0.57
SCAF11-205ENST00000465950 DHX37Q8IY37 1157 aaKnown RBP11.49□□□□□ -0.57
SCAF11-205ENST00000465950 CABP5Q9NP86 173 aa11.49□□□□□ -0.57
SCAF11-205ENST00000465950 RBM17Q96I25 401 aaKnown RBP11.49□□□□□ -0.57
SCAF11-205ENST00000465950 CCNL1Q9UK58 526 aaPredicted RBP11.49□□□□□ -0.57
SCAF11-205ENST00000465950 PIK3R4Q99570 1358 aa11.49□□□□□ -0.57
SCAF11-205ENST00000465950 SPDYE4A6NLX3 237 aa11.49□□□□□ -0.57
SCAF11-205ENST00000465950 TTC39AQ5SRH9 613 aa11.49□□□□□ -0.57
SCAF11-205ENST00000465950 SULT6B1Q6IMI4 303 aa11.49□□□□□ -0.57
SCAF11-205ENST00000465950 LARP1Q6PKG0 1096 aaKnown RBP11.49□□□□□ -0.57
SCAF11-205ENST00000465950 NLRP3Q96P20 1036 aa11.49□□□□□ -0.57
SCAF11-205ENST00000465950 BTG4Q9NY30 223 aa11.49□□□□□ -0.57
SCAF11-205ENST00000465950 BIN2Q9UBW5 565 aaPredicted RBP11.49□□□□□ -0.57
SCAF11-205ENST00000465950 PPIP5K1Q6PFW1 1433 aa11.49□□□□□ -0.57
SCAF11-205ENST00000465950 JCADQ9P266 1359 aa11.48□□□□□ -0.57
SCAF11-205ENST00000465950 CEP126Q9P2H0 1117 aa11.48□□□□□ -0.57
SCAF11-205ENST00000465950 SAFBQ15424 915 aaKnown RBP eCLIP11.48□□□□□ -0.57
SCAF11-205ENST00000465950 NFE2L2Q16236 605 aa11.48□□□□□ -0.57
SCAF11-205ENST00000465950 PLIN1O60240 522 aa11.48□□□□□ -0.57
SCAF11-205ENST00000465950 SAMD1Q6SPF0 538 aaPredicted RBP11.48□□□□□ -0.57
SCAF11-205ENST00000465950 CRBNQ96SW2 442 aa11.48□□□□□ -0.57
SCAF11-205ENST00000465950 PHF14O94880 888 aa11.48□□□□□ -0.57
SCAF11-205ENST00000465950 C14orf93Q9H972 538 aaKnown RBP11.48□□□□□ -0.57
SCAF11-205ENST00000465950 HLA-DOAP06340 250 aa11.47□□□□□ -0.57
SCAF11-205ENST00000465950 MAP3K1Q13233 1512 aa11.47□□□□□ -0.57
SCAF11-205ENST00000465950 GPATCH8Q9UKJ3 1502 aaKnown RBP11.47□□□□□ -0.57
SCAF11-205ENST00000465950 APBB1O00213 710 aa11.47□□□□□ -0.57
SCAF11-205ENST00000465950 PUS7Q96PZ0 661 aaKnown RBP11.47□□□□□ -0.57
SCAF11-205ENST00000465950 PTMSP20962 102 aa11.46□□□□□ -0.57
SCAF11-205ENST00000465950 ZNF428Q96B54 188 aa11.46□□□□□ -0.57
SCAF11-205ENST00000465950 FCHSD2O94868 740 aa11.46□□□□□ -0.57
SCAF11-205ENST00000465950 NFXL1Q6ZNB6 911 aa11.46□□□□□ -0.57
SCAF11-205ENST00000465950 MAPKBP1O60336 1514 aa11.46□□□□□ -0.58
SCAF11-205ENST00000465950 CPLX1O14810 134 aa11.45□□□□□ -0.58
SCAF11-205ENST00000465950 ALDH1B1P30837 517 aa11.45□□□□□ -0.58
SCAF11-205ENST00000465950 CCDC152Q4G0S7 254 aa11.45□□□□□ -0.58
SCAF11-205ENST00000465950 CLASRPQ8N2M8 674 aaKnown RBP11.45□□□□□ -0.58
SCAF11-205ENST00000465950 SIRT1Q96EB6 747 aa11.45□□□□□ -0.58
SCAF11-205ENST00000465950 HMOX1P09601 288 aa11.45□□□□□ -0.58
SCAF11-205ENST00000465950 NLGN1Q8N2Q7 840 aa11.45□□□□□ -0.58
SCAF11-205ENST00000465950 SPON1Q9HCB6 807 aa11.45□□□□□ -0.58
SCAF11-205ENST00000465950 DDX19BQ9UMR2 479 aa11.45□□□□□ -0.58
SCAF11-205ENST00000465950 SLC5A1P13866 664 aa11.45□□□□□ -0.58
SCAF11-205ENST00000465950 CCT4P50991 539 aaKnown RBP11.45□□□□□ -0.58
SCAF11-205ENST00000465950 THRAP3Q9Y2W1 955 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 1125.3 ms