RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 KDM4CQ9H3R0 1056 aa8.27□□□□□ -1.09
EXOSC3-204ENST00000465860 WASF2Q9Y6W5 498 aa8.27□□□□□ -1.09
EXOSC3-204ENST00000465860 RUSC2Q8N2Y8 1516 aa8.27□□□□□ -1.09
EXOSC3-204ENST00000465860 ERCC6L2Q5T890 1561 aa8.27□□□□□ -1.09
EXOSC3-204ENST00000465860 ARAP1Q96P48 1450 aa8.26□□□□□ -1.09
EXOSC3-204ENST00000465860 FOXJ1Q92949 421 aa8.26□□□□□ -1.09
EXOSC3-204ENST00000465860 IGF1RP08069 1367 aa8.25□□□□□ -1.09
EXOSC3-204ENST00000465860 FAM117AQ9C073 453 aa8.25□□□□□ -1.09
EXOSC3-204ENST00000465860 FHAD1B1AJZ9 1412 aa8.25□□□□□ -1.09
EXOSC3-204ENST00000465860 NUP160Q12769 1436 aa8.24□□□□□ -1.09
EXOSC3-204ENST00000465860 SNRPBP14678 240 aaKnown RBP8.24□□□□□ -1.09
EXOSC3-204ENST00000465860 MPNDQ8N594 471 aa8.24□□□□□ -1.09
EXOSC3-204ENST00000465860 HELBQ8NG08 1087 aaPredicted RBP8.24□□□□□ -1.09
EXOSC3-204ENST00000465860 SHROOM2Q13796 1616 aa8.23□□□□□ -1.09
EXOSC3-204ENST00000465860 PLEKHG3A1L390 1219 aa8.23□□□□□ -1.09
EXOSC3-204ENST00000465860 CAPN5O15484 640 aaPredicted RBP8.23□□□□□ -1.09
EXOSC3-204ENST00000465860 C4orf48Q5BLP8 95 aa8.23□□□□□ -1.09
EXOSC3-204ENST00000465860 FBXO31Q5XUX0 539 aaPredicted RBP8.23□□□□□ -1.09
EXOSC3-204ENST00000465860 TRIM47Q96LD4 638 aa8.23□□□□□ -1.09
EXOSC3-204ENST00000465860 KIF27Q86VH2 1401 aa8.22□□□□□ -1.09
EXOSC3-204ENST00000465860 CUL7Q14999 1698 aa8.22□□□□□ -1.09
EXOSC3-204ENST00000465860 SKIV2LQ15477 1246 aaKnown RBP8.22□□□□□ -1.09
EXOSC3-204ENST00000465860 FAM174AQ8TBP5 190 aa8.22□□□□□ -1.09
EXOSC3-204ENST00000465860 SENP2Q9HC62 589 aa8.22□□□□□ -1.09
EXOSC3-204ENST00000465860 BMP1P13497 986 aa8.21□□□□□ -1.1
EXOSC3-204ENST00000465860 CTDSPL2Q05D32 466 aa8.21□□□□□ -1.1
EXOSC3-204ENST00000465860 NNTQ13423 1086 aa8.21□□□□□ -1.1
EXOSC3-204ENST00000465860 SH3D19Q5HYK7 790 aa8.21□□□□□ -1.1
EXOSC3-204ENST00000465860 LCE2AQ5TA79 106 aaPredicted RBP8.21□□□□□ -1.1
EXOSC3-204ENST00000465860 CYB5RLQ6IPT4 315 aa8.21□□□□□ -1.1
EXOSC3-204ENST00000465860 TREML4Q6UXN2 200 aa8.21□□□□□ -1.1
EXOSC3-204ENST00000465860 TRIM46Q7Z4K8 759 aa8.21□□□□□ -1.1
EXOSC3-204ENST00000465860 PROCA1Q8NCQ7 364 aaPredicted RBP8.21□□□□□ -1.1
EXOSC3-204ENST00000465860 DDRGK1Q96HY6 314 aa8.21□□□□□ -1.1
EXOSC3-204ENST00000465860 AGERQ15109 404 aa8.2□□□□□ -1.1
EXOSC3-204ENST00000465860 CDK15Q96Q40 435 aa8.2□□□□□ -1.1
EXOSC3-204ENST00000465860 ADH1CP00326 375 aa8.19□□□□□ -1.1
EXOSC3-204ENST00000465860 ARID5BQ14865 1188 aa8.19□□□□□ -1.1
EXOSC3-204ENST00000465860 BPHLQ86WA6 291 aaPredicted RBP8.19□□□□□ -1.1
EXOSC3-204ENST00000465860 ARMC2Q8NEN0 867 aa8.19□□□□□ -1.1
EXOSC3-204ENST00000465860 KIFC2Q96AC6 838 aa8.19□□□□□ -1.1
EXOSC3-204ENST00000465860 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.19□□□□□ -1.1
EXOSC3-204ENST00000465860 SH3RF1Q7Z6J0 888 aa8.18□□□□□ -1.1
EXOSC3-204ENST00000465860 TIMP2P16035 220 aa8.17□□□□□ -1.1
EXOSC3-204ENST00000465860 NFX1Q12986 1120 aaKnown RBP8.17□□□□□ -1.1
EXOSC3-204ENST00000465860 PPP2R2DQ66LE6 453 aa8.17□□□□□ -1.1
EXOSC3-204ENST00000465860 LRRN4Q8WUT4 740 aa8.17□□□□□ -1.1
EXOSC3-204ENST00000465860 KLF16Q9BXK1 252 aaPredicted RBP8.17□□□□□ -1.1
EXOSC3-204ENST00000465860 CARMIL1Q5VZK9 1371 aa8.17□□□□□ -1.1
EXOSC3-204ENST00000465860 WFS1O76024 890 aa8.16□□□□□ -1.1
EXOSC3-204ENST00000465860 GRM5P41594 1212 aa8.16□□□□□ -1.1
EXOSC3-204ENST00000465860 WDR4P57081 412 aaKnown RBP8.16□□□□□ -1.1
EXOSC3-204ENST00000465860 NBPF14Q5TI25 921 aa8.16□□□□□ -1.1
EXOSC3-204ENST00000465860 SH3BP5LQ7L8J4 393 aa8.16□□□□□ -1.1
EXOSC3-204ENST00000465860 C1QTNF2Q9BXJ5 285 aa8.16□□□□□ -1.1
EXOSC3-204ENST00000465860 PRG4Q92954 1404 aaPredicted RBP8.15□□□□□ -1.1
EXOSC3-204ENST00000465860 NR3C2P08235 984 aa8.15□□□□□ -1.1
EXOSC3-204ENST00000465860 ATP1B4Q9UN42 357 aaPredicted RBP8.15□□□□□ -1.1
EXOSC3-204ENST00000465860 NR5A1Q13285 461 aa8.14□□□□□ -1.11
EXOSC3-204ENST00000465860 ZFP42Q96MM3 310 aa8.14□□□□□ -1.11
EXOSC3-204ENST00000465860 KIAA0586Q9BVV6 1533 aa8.13□□□□□ -1.11
EXOSC3-204ENST00000465860 MAGEB6P1A0A0J9YX57 407 aa8.13□□□□□ -1.11
EXOSC3-204ENST00000465860 TERTO14746 1132 aaKnown RBP8.13□□□□□ -1.11
EXOSC3-204ENST00000465860 GPKOWQ92917 476 aaPredicted RBP eCLIP8.13□□□□□ -1.11
EXOSC3-204ENST00000465860 ITPKCQ96DU7 683 aa8.13□□□□□ -1.11
EXOSC3-204ENST00000465860 ZFAND3Q9H8U3 227 aa8.13□□□□□ -1.11
EXOSC3-204ENST00000465860 ZIC2O95409 532 aaPredicted RBP8.12□□□□□ -1.11
EXOSC3-204ENST00000465860 NR6A1Q15406 480 aa8.12□□□□□ -1.11
EXOSC3-204ENST00000465860 LCE2CQ5TA81 110 aa8.12□□□□□ -1.11
EXOSC3-204ENST00000465860 MRPL14Q6P1L8 145 aaKnown RBP8.12□□□□□ -1.11
EXOSC3-204ENST00000465860 TRMT44Q8IYL2 757 aaKnown RBP8.12□□□□□ -1.11
EXOSC3-204ENST00000465860 CARD14Q9BXL6 1004 aa8.12□□□□□ -1.11
EXOSC3-204ENST00000465860 RAPGEF2Q9Y4G8 1499 aa8.12□□□□□ -1.11
EXOSC3-204ENST00000465860 CTTNBP2Q8WZ74 1663 aa8.11□□□□□ -1.11
EXOSC3-204ENST00000465860 IQGAP2Q13576 1575 aa8.11□□□□□ -1.11
EXOSC3-204ENST00000465860 AP1G2O75843 785 aa8.11□□□□□ -1.11
EXOSC3-204ENST00000465860 FKBPLQ9UIM3 349 aa8.11□□□□□ -1.11
EXOSC3-204ENST00000465860 MAP4K5Q9Y4K4 846 aa8.11□□□□□ -1.11
EXOSC3-204ENST00000465860 PRXQ9BXM0 1461 aa8.11□□□□□ -1.11
EXOSC3-204ENST00000465860 FSHRP23945 695 aa8.1□□□□□ -1.11
EXOSC3-204ENST00000465860 ERFEQ4G0M1 354 aa8.1□□□□□ -1.11
EXOSC3-204ENST00000465860 PDXDC2PQ6P474 469 aa8.1□□□□□ -1.11
EXOSC3-204ENST00000465860 VASH1Q7L8A9 365 aaPredicted RBP8.1□□□□□ -1.11
EXOSC3-204ENST00000465860 PURBQ96QR8 312 aaKnown RBP8.1□□□□□ -1.11
EXOSC3-204ENST00000465860 EPS8L1Q8TE68 723 aa8.09□□□□□ -1.11
EXOSC3-204ENST00000465860 ARHGAP9Q9BRR9 750 aa8.09□□□□□ -1.11
EXOSC3-204ENST00000465860 DISP1Q96F81 1524 aa8.08□□□□□ -1.12
EXOSC3-204ENST00000465860 ADCY10Q96PN6 1610 aa8.08□□□□□ -1.12
EXOSC3-204ENST00000465860 RFC5P40937 340 aa8.08□□□□□ -1.12
EXOSC3-204ENST00000465860 SCARF1Q14162 830 aa8.08□□□□□ -1.12
EXOSC3-204ENST00000465860 NEUROD2Q15784 382 aa8.08□□□□□ -1.12
EXOSC3-204ENST00000465860 HMX1Q9NP08 348 aaPredicted RBP8.08□□□□□ -1.12
EXOSC3-204ENST00000465860 USP17L8P0C7I0 530 aa8.07□□□□□ -1.12
EXOSC3-204ENST00000465860 FAM9AQ8IZU1 332 aaPredicted RBP8.07□□□□□ -1.12
EXOSC3-204ENST00000465860 OCSTAMPQ9BR26 566 aa8.07□□□□□ -1.12
EXOSC3-204ENST00000465860 NXF1Q9UBU9 619 aaKnown RBP8.07□□□□□ -1.12
EXOSC3-204ENST00000465860 ZC3H4Q9UPT8 1303 aaKnown RBP8.06□□□□□ -1.12
EXOSC3-204ENST00000465860 SOBPA7XYQ1 873 aa8.06□□□□□ -1.12
EXOSC3-204ENST00000465860 IL27Q8NEV9 243 aa8.06□□□□□ -1.12
EXOSC3-204ENST00000465860 GOPCQ9HD26 462 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms