RNA–Protein interactions for RNA: ENST00000465673.5

GPNMB-206, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 793 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-206ENST00000465673 SBF2Q86WG5 1849 aa14.9□□□□□ -0.02
GPNMB-206ENST00000465673 ZBTB7AO95365 584 aa14.9□□□□□ -0.02
GPNMB-206ENST00000465673 L3MBTL2Q969R5 705 aa14.9□□□□□ -0.02
GPNMB-206ENST00000465673 PIK3C2AO00443 1686 aa14.9□□□□□ -0.02
GPNMB-206ENST00000465673 WDR17Q8IZU2 1322 aa14.9□□□□□ -0.02
GPNMB-206ENST00000465673 BRD4O60885 1362 aaPredicted RBP14.89□□□□□ -0.03
GPNMB-206ENST00000465673 ARHGEF25Q86VW2 580 aa14.89□□□□□ -0.03
GPNMB-206ENST00000465673 TTC21BQ7Z4L5 1316 aa14.89□□□□□ -0.03
GPNMB-206ENST00000465673 C11orf95C9JLR9 678 aaPredicted RBP14.88□□□□□ -0.03
GPNMB-206ENST00000465673 CSB-PGBD3P0DP91 1061 aa14.88□□□□□ -0.03
GPNMB-206ENST00000465673 ATF5Q9Y2D1 282 aaPredicted RBP14.88□□□□□ -0.03
GPNMB-206ENST00000465673 NINLQ9Y2I6 1382 aa14.87□□□□□ -0.03
GPNMB-206ENST00000465673 CPSF1Q10570 1443 aaKnown RBP14.87□□□□□ -0.03
GPNMB-206ENST00000465673 EVC2Q86UK5 1308 aa14.87□□□□□ -0.03
GPNMB-206ENST00000465673 RGPD5Q99666 1765 aa14.86□□□□□ -0.03
GPNMB-206ENST00000465673 SIN3AQ96ST3 1273 aa14.86□□□□□ -0.03
GPNMB-206ENST00000465673 CARD10Q9BWT7 1032 aa14.86□□□□□ -0.03
GPNMB-206ENST00000465673 CASZ1Q86V15 1759 aa14.85□□□□□ -0.03
GPNMB-206ENST00000465673 PTGER2P43116 358 aa14.85□□□□□ -0.03
GPNMB-206ENST00000465673 TXNRD1Q16881 649 aa14.85□□□□□ -0.03
GPNMB-206ENST00000465673 DCAF8L1A6NGE4 600 aa14.84□□□□□ -0.03
GPNMB-206ENST00000465673 WNK3Q9BYP7 1800 aa14.84□□□□□ -0.03
GPNMB-206ENST00000465673 RGPD3A6NKT7 1758 aaPredicted RBP14.83□□□□□ -0.03
GPNMB-206ENST00000465673 RGPD4Q7Z3J3 1758 aa14.83□□□□□ -0.03
GPNMB-206ENST00000465673 EXOC5O00471 708 aa14.83□□□□□ -0.04
GPNMB-206ENST00000465673 KCNH5Q8NCM2 988 aa14.83□□□□□ -0.04
GPNMB-206ENST00000465673 ACSBG1Q96GR2 724 aa14.83□□□□□ -0.04
GPNMB-206ENST00000465673 ZNF692Q9BU19 519 aaPredicted RBP14.83□□□□□ -0.04
GPNMB-206ENST00000465673 CDCA7Q9BWT1 371 aaPredicted RBP14.83□□□□□ -0.04
GPNMB-206ENST00000465673 MYOM1P52179 1685 aa14.82□□□□□ -0.04
GPNMB-206ENST00000465673 NEUROD1Q13562 356 aa14.82□□□□□ -0.04
GPNMB-206ENST00000465673 SLC15A2Q16348 729 aa14.82□□□□□ -0.04
GPNMB-206ENST00000465673 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.82□□□□□ -0.04
GPNMB-206ENST00000465673 STK32BQ9NY57 414 aa14.82□□□□□ -0.04
GPNMB-206ENST00000465673 BCL9O00512 1426 aa14.82□□□□□ -0.04
GPNMB-206ENST00000465673 AKAP12Q02952 1782 aa14.81□□□□□ -0.04
GPNMB-206ENST00000465673 KTN1Q86UP2 1357 aaKnown RBP14.81□□□□□ -0.04
GPNMB-206ENST00000465673 NFAT5O94916 1531 aa14.81□□□□□ -0.04
GPNMB-206ENST00000465673 FHDC1Q9C0D6 1143 aaPredicted RBP14.8□□□□□ -0.04
GPNMB-206ENST00000465673 TTC21AQ8NDW8 1320 aa14.8□□□□□ -0.04
GPNMB-206ENST00000465673 ROCK2O75116 1388 aaKnown RBP14.8□□□□□ -0.04
GPNMB-206ENST00000465673 TRPM1Q7Z4N2 1603 aa14.8□□□□□ -0.04
GPNMB-206ENST00000465673 NME9Q86XW9 330 aa14.79□□□□□ -0.04
GPNMB-206ENST00000465673 SYT17Q9BSW7 474 aa14.79□□□□□ -0.04
GPNMB-206ENST00000465673 NLRP2Q9NX02 1062 aa14.78□□□□□ -0.04
GPNMB-206ENST00000465673 TNS2Q63HR2 1409 aa14.77□□□□□ -0.04
GPNMB-206ENST00000465673 CCDC7Q96M83 1385 aa14.77□□□□□ -0.04
GPNMB-206ENST00000465673 SGIP1Q9BQI5 828 aa14.77□□□□□ -0.05
GPNMB-206ENST00000465673 ERBB3P21860 1342 aa14.76□□□□□ -0.05
GPNMB-206ENST00000465673 ZNF784Q8NCA9 323 aaPredicted RBP14.76□□□□□ -0.05
GPNMB-206ENST00000465673 MTFR1LQ9H019 292 aa14.76□□□□□ -0.05
GPNMB-206ENST00000465673 UTRNP46939 3433 aa14.76□□□□□ -0.05
GPNMB-206ENST00000465673 ZNF827Q17R98 1081 aa14.75□□□□□ -0.05
GPNMB-206ENST00000465673 TMC1Q8TDI8 760 aa14.75□□□□□ -0.05
GPNMB-206ENST00000465673 SLC12A5Q9H2X9 1139 aa14.75□□□□□ -0.05
GPNMB-206ENST00000465673 LRRC4BQ9NT99 713 aa14.75□□□□□ -0.05
GPNMB-206ENST00000465673 SBNO2Q9Y2G9 1366 aa14.74□□□□□ -0.05
GPNMB-206ENST00000465673 IL2RBP14784 551 aa14.74□□□□□ -0.05
GPNMB-206ENST00000465673 ANKRD24Q8TF21 1146 aa14.74□□□□□ -0.05
GPNMB-206ENST00000465673 CD163L1Q9NR16 1453 aa14.74□□□□□ -0.05
GPNMB-206ENST00000465673 USP31Q70CQ4 1352 aa14.73□□□□□ -0.05
GPNMB-206ENST00000465673 NHSQ6T4R5 1651 aa14.73□□□□□ -0.05
GPNMB-206ENST00000465673 MON2Q7Z3U7 1717 aa14.72□□□□□ -0.05
GPNMB-206ENST00000465673 KCNQ4P56696 695 aa14.72□□□□□ -0.05
GPNMB-206ENST00000465673 ARXQ96QS3 562 aa14.72□□□□□ -0.05
GPNMB-206ENST00000465673 ABCC6O95255 1503 aa14.71□□□□□ -0.05
GPNMB-206ENST00000465673 DDX54Q8TDD1 881 aaKnown RBP14.71□□□□□ -0.05
GPNMB-206ENST00000465673 LTV1Q96GA3 475 aaPredicted RBP14.71□□□□□ -0.05
GPNMB-206ENST00000465673 KAT6BQ8WYB5 2073 aa14.7□□□□□ -0.06
GPNMB-206ENST00000465673 PAPPAQ13219 1627 aa14.7□□□□□ -0.06
GPNMB-206ENST00000465673 FBLN1P23142 703 aa14.7□□□□□ -0.06
GPNMB-206ENST00000465673 BTAF1O14981 1849 aa14.7□□□□□ -0.06
GPNMB-206ENST00000465673 LTN1O94822 1766 aa14.7□□□□□ -0.06
GPNMB-206ENST00000465673 KLHL34Q8N239 644 aa14.69□□□□□ -0.06
GPNMB-206ENST00000465673 CARD11Q9BXL7 1154 aa14.69□□□□□ -0.06
GPNMB-206ENST00000465673 HDGFL2Q7Z4V5 671 aaPredicted RBP14.68□□□□□ -0.06
GPNMB-206ENST00000465673 AKT1S1Q96B36 256 aa14.68□□□□□ -0.06
GPNMB-206ENST00000465673 A0A1W2PP64 1363 aa14.67□□□□□ -0.06
GPNMB-206ENST00000465673 USP54Q70EL1 1684 aa14.66□□□□□ -0.06
GPNMB-206ENST00000465673 PRIM1P49642 420 aaKnown RBP14.66□□□□□ -0.06
GPNMB-206ENST00000465673 IP6K1Q92551 441 aa14.66□□□□□ -0.06
GPNMB-206ENST00000465673 SYTL4Q96C24 671 aaPredicted RBP14.66□□□□□ -0.06
GPNMB-206ENST00000465673 PNPLA7Q6ZV29 1317 aa14.66□□□□□ -0.06
GPNMB-206ENST00000465673 GPR162Q16538 588 aa14.65□□□□□ -0.06
GPNMB-206ENST00000465673 EDC4Q6P2E9 1401 aaKnown RBP14.65□□□□□ -0.06
GPNMB-206ENST00000465673 PELP1Q8IZL8 1130 aaKnown RBP14.64□□□□□ -0.07
GPNMB-206ENST00000465673 TERF2IPQ9NYB0 399 aa14.64□□□□□ -0.07
GPNMB-206ENST00000465673 MAP3K5Q99683 1374 aa14.63□□□□□ -0.07
GPNMB-206ENST00000465673 SENP3-EIF4A1A0A087X0R7 540 aa14.63□□□□□ -0.07
GPNMB-206ENST00000465673 C1QTNF8P60827 252 aa14.63□□□□□ -0.07
GPNMB-206ENST00000465673 NLGN2Q8NFZ4 835 aa14.63□□□□□ -0.07
GPNMB-206ENST00000465673 TFCP2L1Q9NZI6 479 aa14.63□□□□□ -0.07
GPNMB-206ENST00000465673 MAP3K19Q56UN5 1328 aa14.63□□□□□ -0.07
GPNMB-206ENST00000465673 SLC27A3Q5K4L6 730 aa14.62□□□□□ -0.07
GPNMB-206ENST00000465673 CHD4Q14839 1912 aa14.62□□□□□ -0.07
GPNMB-206ENST00000465673 NSD2O96028 1365 aa14.61□□□□□ -0.07
GPNMB-206ENST00000465673 HOXC9P31274 260 aa14.61□□□□□ -0.07
GPNMB-206ENST00000465673 POLD1P28340 1107 aa14.6□□□□□ -0.07
GPNMB-206ENST00000465673 AMPHP49418 695 aa14.6□□□□□ -0.07
GPNMB-206ENST00000465673 SLC16A10Q8TF71 515 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms